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  Genetics

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09.10.2017

1 BMC Cancer
3 BMC Genet
1 Br J Cancer
1 Cancer
1 J Clin Oncol
3 Nature
24 PLoS One
1 Science


  Retrieve available abstracts of this week’s articles:
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Single Articles


    BMC Cancer

  1. STAUDIGL C, Pfeiler G, Hrauda K, Renz R, et al
    Changes of Socio-demographic data of clients seeking genetic counseling for hereditary breast and ovarian cancer due to the "Angelina Jolie Effect".
    BMC Cancer. 2016;16:436.
    PubMed     Text format     Abstract available


    BMC Genet

  2. BERNAL-VASQUEZ AM, Gordillo A, Schmidt M, Piepho HP, et al
    Genomic prediction in early selection stages using multi-year data in a hybrid rye breeding program.
    BMC Genet. 2017;18:51.
    PubMed     Text format     Abstract available

  3. HERNANDEZ CL, Dugoujon JM, Novelletto A, Rodriguez JN, et al
    The distribution of mitochondrial DNA haplogroup H in southern Iberia indicates ancient human genetic exchanges along the western edge of the Mediterranean.
    BMC Genet. 2017;18:46.
    PubMed     Text format     Abstract available

  4. WANG Q, Yu Y, Yuan J, Zhang X, et al
    Effects of marker density and population structure on the genomic prediction accuracy for growth trait in Pacific white shrimp Litopenaeus vannamei.
    BMC Genet. 2017;18:45.
    PubMed     Text format     Abstract available


    Br J Cancer

  5. LEVI F, Karaboue A, Saffroy R, Desterke C, et al
    Pharmacogenetic determinants of outcomes on triplet hepatic artery infusion and intravenous cetuximab for liver metastases from colorectal cancer (European trial OPTILIV, NCT00852228).
    Br J Cancer. 2017 Aug 17. doi: 10.1038/bjc.2017.
    PubMed     Text format     Abstract available


    Cancer

  6. MCWILLIAMS RR, Foster NR, Mahoney MR, Smyrk TC, et al
    North Central Cancer Treatment Group N0543 (Alliance): A phase 2 trial of pharmacogenetic-based dosing of irinotecan, oxaliplatin, and capecitabine as first-line therapy for patients with advanced small bowel adenocarcinoma.
    Cancer. 2017;123:3494-3501.
    PubMed     Text format     Abstract available


    J Clin Oncol

  7. HUGHES KS, Ambinder EP, Hess GP, Yu PP, et al
    Identifying Health Information Technology Needs of Oncologists to Facilitate the Adoption of Genomic Medicine: Recommendations From the 2016 American Society of Clinical Oncology Omics and Precision Oncology Workshop.
    J Clin Oncol. 2017;35:3153-3159.
    PubMed     Text format     Abstract available


    Nature

  8. GRUBAUGH ND, Ladner JT, Kraemer MUG, Dudas G, et al
    Genomic epidemiology reveals multiple introductions of Zika virus into the United States.
    Nature. 2017 May 24. doi: 10.1038/nature22400.
    PubMed     Text format     Abstract available

  9. FARIA NR, Quick J, Claro IM, Theze J, et al
    Establishment and cryptic transmission of Zika virus in Brazil and the Americas.
    Nature. 2017 May 24. doi: 10.1038/nature22401.
    PubMed     Text format     Abstract available

  10. UETZ P, Garg A
    Molecular taxonomy: Species disconnected from DNA sequences.
    Nature. 2017;545:412.
    PubMed     Text format    


    PLoS One

  11. IANGRAI B, Pattanayak A, Khongwir DEA, Pale G, et al
    Development and characterization of a new set of genomic microsatellite markers in rice bean (Vigna umbellata (Thunb.) Ohwi and Ohashi) and their utilization in genetic diversity analysis of collections from North East India.
    PLoS One. 2017;12:e0179801.
    PubMed     Text format     Abstract available

  12. CALAZANS C SH, Walters LJ, Fernandes FC, Ferreira CEL, et al
    Genetic structure provides insights into the geographic origins and temporal change in the invasive charru mussel (Sururu) in the southeastern United States.
    PLoS One. 2017;12:e0180619.
    PubMed     Text format     Abstract available

  13. WILLIAMS KE, Huyvaert KP, Piaggio AJ
    Clearing muddied waters: Capture of environmental DNA from turbid waters.
    PLoS One. 2017;12:e0179282.
    PubMed     Text format     Abstract available

  14. WEI WQ, Bastarache LA, Carroll RJ, Marlo JE, et al
    Evaluating phecodes, clinical classification software, and ICD-9-CM codes for phenome-wide association studies in the electronic health record.
    PLoS One. 2017;12:e0175508.
    PubMed     Text format     Abstract available

  15. BALAZIK MT, Farrae DJ, Darden TL, Garman GC, et al
    Genetic differentiation of spring-spawning and fall-spawning male Atlantic sturgeon in the James River, Virginia.
    PLoS One. 2017;12:e0179661.
    PubMed     Text format     Abstract available

  16. CROUZET M, Claverol S, Lomenech AM, Le Senechal C, et al
    Pseudomonas aeruginosa cells attached to a surface display a typical proteome early as 20 minutes of incubation.
    PLoS One. 2017;12:e0180341.
    PubMed     Text format     Abstract available

  17. REISBERG S, Iljasenko T, Lall K, Fischer K, et al
    Comparing distributions of polygenic risk scores of type 2 diabetes and coronary heart disease within different populations.
    PLoS One. 2017;12:e0179238.
    PubMed     Text format     Abstract available

  18. BOGACKA I, Paukszto L, Jastrzebski JP, Czerwinska J, et al
    Seasonal differences in the testicular transcriptome profile of free-living European beavers (Castor fiber L.) determined by the RNA-Seq method.
    PLoS One. 2017;12:e0180323.
    PubMed     Text format     Abstract available

  19. PALMA RE, Gutierrez-Tapia P, Gonzalez JF, Boric-Bargetto D, et al
    Mountaintops phylogeography: A case study using small mammals from the Andes and the coast of central Chile.
    PLoS One. 2017;12:e0180231.
    PubMed     Text format     Abstract available

  20. OSEI SEKYERE J, Amoako DG
    Genomic and phenotypic characterisation of fluoroquinolone resistance mechanisms in Enterobacteriaceae in Durban, South Africa.
    PLoS One. 2017;12:e0178888.
    PubMed     Text format     Abstract available

  21. MCMAHAN CD, Ginger L, Cage M, David KT, et al
    Pleistocene to holocene expansion of the black-belt cichlid in Central America, Vieja maculicauda (Teleostei: Cichlidae).
    PLoS One. 2017;12:e0178439.
    PubMed     Text format     Abstract available

  22. PU C, Li H, Zhu A, Chen Y, et al
    Phylogeography in Nassarius mud snails: Complex patterns in congeneric species.
    PLoS One. 2017;12:e0180728.
    PubMed     Text format     Abstract available

  23. FELTEN A, Guillier L, Radomski N, Mistou MY, et al
    Genome Target Evaluator (GTEvaluator): A workflow exploiting genome dataset to measure the sensitivity and specificity of genetic markers.
    PLoS One. 2017;12:e0182082.
    PubMed     Text format     Abstract available

  24. NYALWIDHE JO, Grzesik WJ, Burch TC, Semeraro ML, et al
    Comparative quantitative proteomic analysis of disease stratified laser captured microdissected human islets identifies proteins and pathways potentially related to type 1 diabetes.
    PLoS One. 2017;12:e0183908.
    PubMed     Text format     Abstract available

  25. LIN Y, Zhu J, Wang Y, Li Q, et al
    Identification of differentially expressed genes through RNA sequencing in goats (Capra hircus) at different postnatal stages.
    PLoS One. 2017;12:e0182602.
    PubMed     Text format     Abstract available

  26. GUSSOW AB, Copeland BR, Dhindsa RS, Wang Q, et al
    Orion: Detecting regions of the human non-coding genome that are intolerant to variation using population genetics.
    PLoS One. 2017;12:e0181604.
    PubMed     Text format     Abstract available

  27. CONVERSE PE, Kuchta SR, Hauswaldt JS, Roosenburg WM, et al
    Turtle soup, Prohibition, and the population genetic structure of Diamondback Terrapins (Malaclemys terrapin).
    PLoS One. 2017;12:e0181898.
    PubMed     Text format     Abstract available

  28. JI ZH, Chen J, Gao W, Zhang JY, et al
    Cutaneous transcriptome analysis in NIH hairless mice.
    PLoS One. 2017;12:e0182463.
    PubMed     Text format     Abstract available

  29. YAN J, Zhang P, Jiao F, Wang Q, et al
    Quantitative proteomics in A30P*A53T alpha-synuclein transgenic mice reveals upregulation of Sel1l.
    PLoS One. 2017;12:e0182092.
    PubMed     Text format     Abstract available

  30. DREWRY DH, Wells CI, Andrews DM, Angell R, et al
    Progress towards a public chemogenomic set for protein kinases and a call for contributions.
    PLoS One. 2017;12:e0181585.
    PubMed     Text format     Abstract available

  31. ALVAREZ-SILVA MC, Alvarez-Yela AC, Gomez-Cano F, Zambrano MM, et al
    Compartmentalized metabolic network reconstruction of microbial communities to determine the effect of agricultural intervention on soils.
    PLoS One. 2017;12:e0181826.
    PubMed     Text format     Abstract available

  32. COSTEA PI, Munch R, Coelho LP, Paoli L, et al
    metaSNV: A tool for metagenomic strain level analysis.
    PLoS One. 2017;12:e0182392.
    PubMed     Text format     Abstract available

  33. LAVOUE S, Bertrand JAM, Wang HY, Chen WJ, et al
    Molecular systematics of the anchovy genus Encrasicholina in the Northwest Pacific.
    PLoS One. 2017;12:e0181329.
    PubMed     Text format     Abstract available

  34. PENG T, Ma L, Feng X, Tao J, et al
    Genomic and transcriptomic analyses reveal adaptation mechanisms of an Acidithiobacillus ferrivorans strain YL15 to alpine acid mine drainage.
    PLoS One. 2017;12:e0178008.
    PubMed     Text format     Abstract available


    Science

  35. HUGHES TR, Lambert SA
    Transcription factors read epigenetics.
    Science. 2017;356:489-490.
    PubMed     Text format    


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