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  Genetics

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11.09.2017

2 Am J Hum Genet
1 Br J Cancer
2 J Clin Oncol
1 Nature
2 PLoS Biol
2 PLoS Genet
48 PLoS One


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Single Articles


    Am J Hum Genet

  1. LAKE NJ, Webb BD, Stroud DA, Richman TR, et al
    Biallelic Mutations in MRPS34 Lead to Instability of the Small Mitoribosomal Subunit and Leigh Syndrome.
    Am J Hum Genet. 2017;101:239-254.
    PubMed     Text format     Abstract available

  2. HABER M, Doumet-Serhal C, Scheib C, Xue Y, et al
    Continuity and Admixture in the Last Five Millennia of Levantine History from Ancient Canaanite and Present-Day Lebanese Genome Sequences.
    Am J Hum Genet. 2017;101:274-282.
    PubMed     Text format     Abstract available


    Br J Cancer

  3. SARASWAT M, Makitie A, Agarwal R, Joenvaara S, et al
    Oral squamous cell carcinoma patients can be differentiated from healthy individuals with label-free serum proteomics.
    Br J Cancer. 2017;117:376-384.
    PubMed     Text format     Abstract available


    J Clin Oncol

  4. MACK SC, Northcott PA
    Genomic Analysis of Childhood Brain Tumors: Methods for Genome-Wide Discovery and Precision Medicine Become Mainstream.
    J Clin Oncol. 2017 Jun 22:JCO2017729921. doi: 10.1200/JCO.2017.72.9921.
    PubMed     Text format     Abstract available

  5. DIAMANDIS P, Aldape KD
    Insights From Molecular Profiling of Adult Glioma.
    J Clin Oncol. 2017 Jun 22:JCO2017739516. doi: 10.1200/JCO.2017.73.9516.
    PubMed     Text format     Abstract available


    Nature

  6. CALLAWAY E
    The trickiest family tree in biology.
    Nature. 2017;547:20-22.
    PubMed     Text format    


    PLoS Biol

  7. MEAD R, Hejmadi M, Hurst LD
    Teaching genetics prior to teaching evolution improves evolution understanding but not acceptance.
    PLoS Biol. 2017;15:e2002255.
    PubMed     Text format     Abstract available

  8. CHESSON P
    AEDT: A new concept for ecological dynamics in the ever-changing world.
    PLoS Biol. 2017;15:e2002634.
    PubMed     Text format     Abstract available


    PLoS Genet

  9. LIN EW, Karakasheva TA, Lee DJ, Lee JS, et al
    Comparative transcriptomes of adenocarcinomas and squamous cell carcinomas reveal molecular similarities that span classical anatomic boundaries.
    PLoS Genet. 2017;13:e1006938.
    PubMed     Text format     Abstract available

  10. CHEN T, van Steensel B
    Comprehensive analysis of nucleocytoplasmic dynamics of mRNA in Drosophila cells.
    PLoS Genet. 2017;13:e1006929.
    PubMed     Text format     Abstract available


    PLoS One

  11. NICHOLAS A, Kim YK, Lee WK, Selasi GN, et al
    Molecular epidemiology and antimicrobial susceptibility of Clostridium difficile isolates from two Korean hospitals.
    PLoS One. 2017;12:e0174716.
    PubMed     Text format     Abstract available

  12. ZHANG LJ, Cai WZ, Luo JY, Zhang S, et al
    Phylogeographic patterns of Lygus pratensis (Hemiptera: Miridae): Evidence for weak genetic structure and recent expansion in northwest China.
    PLoS One. 2017;12:e0174712.
    PubMed     Text format     Abstract available

  13. WEI LH, Yan S, Teo YY, Huang YZ, et al
    Phylogeography of Y-chromosome haplogroup O3a2b2-N6 reveals patrilineal traces of Austronesian populations on the eastern coastal regions of Asia.
    PLoS One. 2017;12:e0175080.
    PubMed     Text format     Abstract available

  14. LUDINGTON WB, Seher TD, Applegate O, Li X, et al
    Assessing biosynthetic potential of agricultural groundwater through metagenomic sequencing: A diverse anammox community dominates nitrate-rich groundwater.
    PLoS One. 2017;12:e0174930.
    PubMed     Text format     Abstract available

  15. RIBEIRO MM, Piotti A, Ricardo A, Gaspar D, et al
    Genetic diversity and divergence at the Arbutus unedo L. (Ericaceae) westernmost distribution limit.
    PLoS One. 2017;12:e0175239.
    PubMed     Text format     Abstract available

  16. MARITZ JM, Sullivan SA, Prill RJ, Aksoy E, et al
    Filthy lucre: A metagenomic pilot study of microbes found on circulating currency in New York City.
    PLoS One. 2017;12:e0175527.
    PubMed     Text format     Abstract available

  17. MURPHY SN, Avillach P, Bellazzi R, Phillips L, et al
    Combining clinical and genomics queries using i2b2 - Three methods.
    PLoS One. 2017;12:e0172187.
    PubMed     Text format     Abstract available

  18. LV J, Zhang L, Liu P, Li J, et al
    Transcriptomic variation of eyestalk reveals the genes and biological processes associated with molting in Portunus trituberculatus.
    PLoS One. 2017;12:e0175315.
    PubMed     Text format     Abstract available

  19. LI YZ, Fan XW, Chen Q, Zhong H, et al
    A photoperiod-responsive protein compendium and conceptual proteome roadmap outline in maize grown in growth chambers with controlled conditions.
    PLoS One. 2017;12:e0174003.
    PubMed     Text format     Abstract available

  20. FRANCOIS L, Wijnrocx K, Colinet FG, Gengler N, et al
    Genomics of a revived breed: Case study of the Belgian campine cattle.
    PLoS One. 2017;12:e0175916.
    PubMed     Text format     Abstract available

  21. WAN X, Zhao X, Yau SS
    An information-based network approach for protein classification.
    PLoS One. 2017;12:e0174386.
    PubMed     Text format     Abstract available

  22. SONG YN, Dong S, Wei B, Liu P, et al
    Metabolomic mechanisms of gypenoside against liver fibrosis in rats: An integrative analysis of proteomics and metabolomics data.
    PLoS One. 2017;12:e0173598.
    PubMed     Text format     Abstract available

  23. FUKAGAWA T, Takafuji K, Tachibanaki S, Kawamura S, et al
    Purification of cone outer segment for proteomic analysis on its membrane proteins in carp retina.
    PLoS One. 2017;12:e0173908.
    PubMed     Text format     Abstract available

  24. JAMANN TM, Sood S, Wisser RJ, Holland JB, et al
    High-Throughput Resequencing of Maize Landraces at Genomic Regions Associated with Flowering Time.
    PLoS One. 2017;12:e0168910.
    PubMed     Text format     Abstract available

  25. ELMI AA, Bansal D, Acharya A, Skariah S, et al
    Human Papillomavirus (HPV) Infection: Molecular Epidemiology, Genotyping, Seroprevalence and Associated Risk Factors among Arab Women in Qatar.
    PLoS One. 2017;12:e0169197.
    PubMed     Text format     Abstract available

  26. MICALLEF G, Cash P, Fernandes JM, Rajan B, et al
    Dietary Yeast Cell Wall Extract Alters the Proteome of the Skin Mucous Barrier in Atlantic Salmon (Salmo salar): Increased Abundance and Expression of a Calreticulin-Like Protein.
    PLoS One. 2017;12:e0169075.
    PubMed     Text format     Abstract available

  27. HAFT DR, Haft DH
    A comprehensive software suite for protein family construction and functional site prediction.
    PLoS One. 2017;12:e0171758.
    PubMed     Text format     Abstract available

  28. LI J, Yang B, Shi M, Yuan K, et al
    Effects upon metabolic pathways and energy production by Sb(III) and As(III)/Sb(III)-oxidase gene aioA in Agrobacterium tumefaciens GW4.
    PLoS One. 2017;12:e0172823.
    PubMed     Text format     Abstract available

  29. MATSUDA F, Kinoshita S, Nishino S, Tomita A, et al
    Targeted proteome analysis of single-gene deletion strains of Saccharomyces cerevisiae lacking enzymes in the central carbon metabolism.
    PLoS One. 2017;12:e0172742.
    PubMed     Text format     Abstract available

  30. CHRISTENSEN KA, Davidson WS
    Autopolyploidy genome duplication preserves other ancient genome duplications in Atlantic salmon (Salmo salar).
    PLoS One. 2017;12:e0173053.
    PubMed     Text format     Abstract available

  31. GUERRERO-JIMENEZ CJ, Pena F, Morales P, Mendez M, et al
    Pattern of genetic differentiation of an incipient speciation process: The case of the high Andean killifish Orestias.
    PLoS One. 2017;12:e0170380.
    PubMed     Text format     Abstract available

  32. LIU T, Luo C, Wang J, Ma J, et al
    Assessment of the genomic prediction accuracy for feed efficiency traits in meat-type chickens.
    PLoS One. 2017;12:e0173620.
    PubMed     Text format     Abstract available

  33. CELIS JS, Edgell DR, Stelbrink B, Wibberg D, et al
    Evolutionary and biogeographical implications of degraded LAGLIDADG endonuclease functionality and group I intron occurrence in stony corals (Scleractinia) and mushroom corals (Corallimorpharia).
    PLoS One. 2017;12:e0173734.
    PubMed     Text format     Abstract available

  34. OH J, Lee S, Lee H, Cho JY, et al
    The novel carboxylesterase 1 variant c.662A>G may decrease the bioactivation of oseltamivir in humans.
    PLoS One. 2017;12:e0176320.
    PubMed     Text format     Abstract available

  35. NAVARRO G, Martinez-Pinilla E, Sanchez-Melgar A, Ortiz R, et al
    A genomics approach identifies selective effects of trans-resveratrol in cerebral cortex neuron and glia gene expression.
    PLoS One. 2017;12:e0176067.
    PubMed     Text format     Abstract available

  36. RAYMOND CK, Hernandez J, Karr R, Hill K, et al
    Collection of cell-free DNA for genomic analysis of solid tumors in a clinical laboratory setting.
    PLoS One. 2017;12:e0176241.
    PubMed     Text format     Abstract available

  37. YARYGIN K, Tyakht A, Larin A, Kostryukova E, et al
    Abundance profiling of specific gene groups using precomputed gut metagenomes yields novel biological hypotheses.
    PLoS One. 2017;12:e0176154.
    PubMed     Text format     Abstract available

  38. WANG J, Pei L, Jin Z, Zhang K, et al
    Overexpression of the protein phosphatase 2A regulatory subunit a gene ZmPP2AA1 improves low phosphate tolerance by remodeling the root system architecture of maize.
    PLoS One. 2017;12:e0176538.
    PubMed     Text format     Abstract available

  39. RODRIGUES J, Viegas W, Silva M
    45S rDNA external transcribed spacer organization reveals new phylogenetic relationships in Avena genus.
    PLoS One. 2017;12:e0176170.
    PubMed     Text format     Abstract available

  40. ZHU Y, Zhou G, Yu X, Xu Q, et al
    LC-MS-MS quantitative analysis reveals the association between FTO and DNA methylation.
    PLoS One. 2017;12:e0175849.
    PubMed     Text format     Abstract available

  41. KARAH N, Jolley KA, Hall RM, Uhlin BE, et al
    Database for the ampC alleles in Acinetobacter baumannii.
    PLoS One. 2017;12:e0176695.
    PubMed     Text format     Abstract available

  42. CARRERAS-PLANELLA L, Soler-Majoral J, Rubio-Esteve C, Lozano-Ramos SI, et al
    Characterization and proteomic profile of extracellular vesicles from peritoneal dialysis efflux.
    PLoS One. 2017;12:e0176987.
    PubMed     Text format     Abstract available

  43. MORALES-CORREA E CASTRO AC, Barbosa NCCP
    Recent evolutionary history of Chrysoperla externa (Hagen 1861) (Neuroptera: Chrysopidae) in Brazil.
    PLoS One. 2017;12:e0177414.
    PubMed     Text format     Abstract available

  44. SONG J, Hu Y, Li J, Zheng H, et al
    Different microRNA profiles reveal the diverse outcomes induced by EV71 and CA16 infection in human umbilical vein endothelial cells using high-throughput sequencing.
    PLoS One. 2017;12:e0177657.
    PubMed     Text format     Abstract available

  45. CLARKE B, Mahapatra M, Friedgut O, Bumbarov V, et al
    Persistence of Lineage IV Peste-des-petits ruminants virus within Israel since 1993: An evolutionary perspective.
    PLoS One. 2017;12:e0177028.
    PubMed     Text format     Abstract available

  46. RUEDA-ZARATE HA, Imaz-Rosshandler I, Cardenas-Ovando RA, Castillo-Fernandez JE, et al
    A computational toxicogenomics approach identifies a list of highly hepatotoxic compounds from a large microarray database.
    PLoS One. 2017;12:e0176284.
    PubMed     Text format     Abstract available

  47. NAOUR S, Espinoza BM, Aedo JE, Zuloaga R, et al
    Transcriptomic analysis of the hepatic response to stress in the red cusk-eel (Genypterus chilensis): Insights into lipid metabolism, oxidative stress and liver steatosis.
    PLoS One. 2017;12:e0176447.
    PubMed     Text format     Abstract available

  48. SALEHE BR, Jones CI, Di Fatta G, McGuffin LJ, et al
    RAPIDSNPs: A new computational pipeline for rapidly identifying key genetic variants reveals previously unidentified SNPs that are significantly associated with individual platelet responses.
    PLoS One. 2017;12:e0175957.
    PubMed     Text format     Abstract available

  49. SINGH SK, Aspi J, Kvist L, Sharma R, et al
    Fine-scale population genetic structure of the Bengal tiger (Panthera tigris tigris) in a human-dominated western Terai Arc Landscape, India.
    PLoS One. 2017;12:e0174371.
    PubMed     Text format     Abstract available

  50. WELINDER C, Pawlowski K, Szasz AM, Yakovleva M, et al
    Correlation of histopathologic characteristics to protein expression and function in malignant melanoma.
    PLoS One. 2017;12:e0176167.
    PubMed     Text format     Abstract available

  51. ONUKI R, Yamaguchi R, Shibuya T, Kanehisa M, et al
    Revealing phenotype-associated functional differences by genome-wide scan of ancient haplotype blocks.
    PLoS One. 2017;12:e0176530.
    PubMed     Text format     Abstract available

  52. VIANA MVC, Figueiredo H, Ramos R, Guimaraes LC, et al
    Comparative genomic analysis between Corynebacterium pseudotuberculosis strains isolated from buffalo.
    PLoS One. 2017;12:e0176347.
    PubMed     Text format     Abstract available

  53. JEONG C, Peter BM, Basnyat B, Neupane M, et al
    A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.
    PLoS One. 2017;12:e0175885.
    PubMed     Text format     Abstract available

  54. NORONHA FERNANDES-BRUM C, Marinho Rezende P, Cherubino Ribeiro TH, Ricon de Oliveira R, et al
    A genome-wide analysis of the RNA-guided silencing pathway in coffee reveals insights into its regulatory mechanisms.
    PLoS One. 2017;12:e0176333.
    PubMed     Text format     Abstract available

  55. FUKUDA T, Nomura M, Kato Y, Tojo H, et al
    A selected reaction monitoring mass spectrometric assessment of biomarker candidates diagnosing large-cell neuroendocrine lung carcinoma by the scaling method using endogenous references.
    PLoS One. 2017;12:e0176219.
    PubMed     Text format     Abstract available

  56. ROOMP K, Kristinsson H, Schvartz D, Ubhayasekera K, et al
    Combined lipidomic and proteomic analysis of isolated human islets exposed to palmitate reveals time-dependent changes in insulin secretion and lipid metabolism.
    PLoS One. 2017;12:e0176391.
    PubMed     Text format     Abstract available

  57. BARUAH IK, Panda D, M V J, Das DJ, et al
    Bruchid egg induced transcript dynamics in developing seeds of black gram (Vigna mungo).
    PLoS One. 2017;12:e0176337.
    PubMed     Text format     Abstract available

  58. NANDAKUMAR P, Tin A, Grove ML, Ma J, et al
    MicroRNAs in the miR-17 and miR-15 families are downregulated in chronic kidney disease with hypertension.
    PLoS One. 2017;12:e0176734.
    PubMed     Text format     Abstract available


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