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	The Medical Article of the Year 2008

Hepatitis

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June 2008
1. LAI CK , Jeng KS, Machida K, Lai MM, et al
   Association of hepatitis C virus replication complexes with microtubules and actin filaments is dependent on the interaction of NS3 and NS5A.
   J Virol. 2008;.
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2. OKAMOTO K , Mori Y, Komoda Y, Okamoto T, et al
   Intramembrane Processing by Signal Peptide Peptidase Regulates the Membrane Localization of Hepatitis C Virus Core Protein and Viral Propagation.
   J Virol. 2008;.
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3. BUKH J , Thimme R, Meunier JC, Faulk K, et al
   Previously infected chimpanzees are not consistently protected from reinfection or persistent infection following reexposure to the identical hepatitis C virus strain.
   J Virol. 2008;.
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4. CHANG J , Guo JT, Jiang D, Guo H, et al
   Liver Specific microRNA, miR-122, Enhances the Replication of Hepatitis C Virus in Non-hepatic Cells.
   J Virol. 2008;.
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5. PU Y , Zhang X
   Mouse Hepatitis Virus Type 2 Enters Cells Through Clathrin-Mediated Endocytic Pathway Independent of Eps15.
   J Virol. 2008;.
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6. CHAI N , Chang HE, Nicolas E, Han Z, et al
   Properties of Subviral Particles of Hepatitis B Virus.
   J Virol. 2008;.
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7. MASAKI T , Suzuki R, Murakami K, Aizaki H, et al
   Interaction of hepatitis C virus nonstructural protein 5A with core protein is critical for the production of infectious virus particles.
   J Virol. 2008;.
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8. ZIMMERMAN KA , Fischer KP, Joyce MA, Tyrrell DL, et al
   Zinc finger proteins designed to specifically target duck hepatitis B virus cccDNA inhibit viral transcription in tissue culture.
   J Virol. 2008;.
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   May 2008
9. LIN Y , Kwon T, Polo J, Zhu YF, et al
   The induction of broad CD4+ and CD8+ T cell responses and cross-neutralizing antibodies against the hepatitis C virus (HCV) by vaccinating with Th1-adjuvanted polypeptides followed by defective alphaviral particles expressing envelope glycoproteins gpE1/
   J Virol. 2008;.
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10. MA Y , Yates J, Liang Y, Lemon SM, et al
    NS3 Helicase Domains Involved in Infectious Intracellular Hepatitis C Virus Particle Assembly.
    J Virol. 2008;.
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11. GUDIMA S , He Y, Chai N, Bruss V, et al
    Primary Human Hepatocytes are Susceptible to Infection by Hepatitis Delta Virus Assembled with Envelope Proteins of Woodchuck Hepatitis Virus.
    J Virol. 2008;.
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12. MULROONEY-COUSINS PM , Michalak TI
    Repeated Passage of Wild-Type Woodchuck Hepatitis Virus in Lymphoid Cells Does Not Generate Cell Type-Specific Variants or Alters Virus Infectivity.
    J Virol. 2008;.
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13. LI H , Thomassen LV, Majid A, McMahon BJ, et al
    Investigation of putative multi-subtype hepatitis C virus infections in vivo by heteroduplex mobility analysis of core/envelope subgenomes.
    J Virol. 2008;.
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14. NGUYEN DH , Hu J
    REVERSE TRANSCRIPTASE AND RNA PACKAGING SIGNAL DEPENDENT INCORPORATION OF APOBEC3G INTO HEPATITIS B VIRUS NUCLEOCAPSIDS.
    J Virol. 2008;.
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15. STEINMANN E , Brohm C, Kallis S, Bartenschlager R, et al
    Efficient Trans-Encapsidation of Hepatitis C Virus RNAs into Infectious Virus-like Particles.
    J Virol. 2008;.
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16. CAETANO J , Martinho A, Paiva A, Pais B, et al
    Differences in HCV-specific CD8 T cell phenotype during pegylated interferon-{alpha} and ribavirin treatment are related with response to antiviral therapy in hepatitis C chronically infected patients.
    J Virol. 2008;.
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17. GUJAR SA , Jenkins AK, Guy CS, Wang J, et al
    Aberrant Lymphocyte Activation Precedes Delayed Virus-Specific T Cell Response after Both Primary Infection and Secondary Exposure to Hepadnavirus in the Woodchuck Model of Hepatitis B.
    J Virol. 2008;.
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18. HUANG WH , Mai RT, Wu Lee YH
    The Transcription Factor YY1 and Its Associated Acetyltransferases CBP and p300 Interact with Hepatitis Delta Antigens and Modulate the Hepatitis Delta Virus RNA Replication.
    J Virol. 2008;.
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    April 2008
19. MUNOZ DE RUEDA P , Casado J, Paton R, Quintero D, et al
    Prospective studies of mutations in the E2-PePHD, NS5A-PKRBD, NS5A-ISDR and NS5A-V3 regions of hepatitis C virus genotype 1 and their relationship to peginterferon and ribavirin treatment response.
    J Virol. 2008;.
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20. CLIPPINGER AJ , Bouchard MJ
    THE HEPATITIS B VIRUS HBX PROTEIN LOCALIZES TO MITOCHONDRIA IN PRIMARY RAT HEPATOCYTES AND MODULATES MITOCHONDRIAL MEMBRANE POTENTIAL.
    J Virol. 2008;.
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21. TURELLI P , Liagre-Quazzola A, Mangeat B, Verp S, et al
    APOBEC3-independent IFN-induced viral clearance in Hepatitis B virus transgenic mice.
    J Virol. 2008;.
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22. MACHIDA K , Kondo Y, Huang J, Chen YC, et al
    HCV-induced Immunoglobulin Hypermutation Reduces the Affinity and Neutralizing Activities of Antibodies against HCV Envelope Protein.
    J Virol. 2008;.
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23. KECK ZY , Li TK, Xia J, Gal-Tanamy M, et al
    Definition of a Conserved Immunodominant Domain on HCV E2 Glycoprotein by Neutralizing Human Monoclonal Antibodies.
    J Virol. 2008;.
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24. ZHANG Z , Harris D, Pandey VN
    The FUSE Binding Protein Is a Cellular Factor Required for Efficient Replication of Hepatitis C Virus.
    J Virol. 2008;.
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25. DAS SARMA J , Iacono K, Gard L, Marek R, et al
    Demyelinating and non-demyelinating strains of mouse hepatitis virus differ in their neural cell tropism.
    J Virol. 2008;.
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26. KECK ZY , Olson O, Gal-Tanamy M, Xia J, et al
    A point mutation leading to hepatitis C virus escape from neutralization by a monoclonal antibody to a conserved conformational epitope.
    J Virol. 2008;.
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27. SPARKS JS , Donaldson EF, Lu X, Baric RS, et al
    A Novel Mutation in Murine Hepatitis Virus nsp5, the Viral 3C-like Proteinase, Causes Temperature-Sensitive Defects in Viral Growth and Protein Processing.
    J Virol. 2008;.
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28. YANG F , Robotham JM, Nelson HB, Irsigler A, et al
    Cyclophilin A is an Essential Cofactor for Hepatitis C Virus Infection and the Principal Mediator of Cyclosporine A Resistance In Vitro.
    J Virol. 2008;.
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    March 2008
29. AIZAKI H , Morikawa K, Fukasawa M, Hara H, et al
    A Critical Role of Virion-Associated Cholesterol and Sphingolipid in Hepatitis C Virus Infection.
    J Virol. 2008;.
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30. HUY TT , Ngoc TT, Abe K
    New genotype of hepatitis B virus identified in Vietnam that showed complex recombinant.
    J Virol. 2008;.
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31. BOWEN DG , Shoukry NH, Grakoui A, Fuller MJ, et al
    Variable patterns of programmed death-1 (PD-1) expression on fully functional memory T cells following spontaneous resolution of hepatitis C virus infection.
    J Virol. 2008;.
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32. HARRIS HJ , Farquhar MJ, Mee CJ, Davis C, et al
    CD81 and Claudin 1 co-receptor association: a role in hepatitis C virus entry.
    J Virol. 2008;.
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33. EBINUMA H , Nakamoto N, Li Y, Price DA, et al
    Identification and in-vitro expansion of functional antigen-specific CD25+FoxP3+ regulatory T-cells in hepatitis C virus infection.
    J Virol. 2008;.
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34. WALSH KB , Lanier LL, Lane TE
    NKG2D receptor signaling enhances cytolytic activity by virus-specific CD8+ T cells: evidence for a protective role in virus-induced encephalitis.
    J Virol. 2008;82:3031-44.
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35. WOOLLARD DJ , Haqshenas G, Dong X, Pratt BF, et al
    Virus-specific T-cell immunity correlates with control of GB virus B infection in marmosets.
    J Virol. 2008;82:3054-60.
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    February 2008
36. TILTON JC , Manion MM, Luskin MR, Johnson AJ, et al
    HIV Viremia Induces Plasmacytoid Dendritic Cell Activation In Vivo and Diminished Interferon-{alpha} Production In Vitro.
    J Virol. 2008;.
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    January 2008
37. MEERTENS L , Bertaux C, Cukierman L, Cormier E, et al
    The tight junction proteins claudin-1, -6 and -9 are entry cofactors for the Hepatitis C virus.
    J Virol. 2008;.
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38. OROPEZA CE , Li L, McLachlan A
    DIFFERENTIAL INHIBITION OF NUCLEAR HORMONE RECEPTOR DEPENDENT HEPATITIS B VIRUS REPLICATION BY SMALL HETERODIMER PARTNER.
    J Virol. 2008;.
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39. OKAMOTO T , Omori H, Kaname Y, Abe T, et al
    A Single Amino Acid Mutation in Hepatitis C Virus NS5A Disrupting FKBP8 Interaction Impairs Viral Replication.
    J Virol. 2008;.
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40. NEUMANN-HAEFELIN C , Frick DN, Wang JJ, Pybus OG, et al
    Analysis of the evolutionary forces in an immunodominant CD8 epitope in the hepatitis C virus at a population level.
    J Virol. 2008;.
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41. SUNG JJ , Tsui SK, Tse CH, Ng EY, et al
    Genotype-Specific Genomic Markers Associated with Primary Hepatoma Based on Complete Genomic Sequencing of Hepatitis B Virus.
    J Virol. 2008;.
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42. BARTH H , Schnober EK, Neumann-Haefelin C, Thumann C, et al
    Scavenger Receptor Class B is Required for Hepatitis C Virus Uptake and Cross-presentation by Human Dendritic Cells.
    J Virol. 2008;.
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43. SAITO K , Ait-Goughoulte M, Truscott SM, Meyer K, et al
    HEPATITIS C VIRUS INHIBITS CELL SURFACE EXPRESSION OF HLA-DR, PREVENTS DENDRITIC CELL MATURATION AND INDUCES IL-10 PRODUCTION.
    J Virol. 2008;.
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44. YERLY D , Heckerman D, Allen TM, Chisholm JV 3rd, et al
    Increased CTL epitope variant cross-recognition and functional avidity are associated with HCV clearance.
    J Virol. 2008;.
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    December 2007
45. KASPROWICZ V , Schulze Zur Wiesch J, Kuntzen T, Nolan BE, et al
    High PD-1 expression on HCV-specific CD8+ and CD4+ T cells during acute Hepatitis C irrespective of clinical outcome.
    J Virol. 2007;.
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46. TAGUWA S , Okamoto T, Abe T, Mori Y, et al
    Human Butyrate-Induced Transcript 1 Interacts with Hepatitis C Virus NS5A and Regulates Viral Replication.
    J Virol. 2007;.
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47. BANERJEE S , Saito K, Ait-Goughoulte M, Meyer K, et al
    HEPATITIS C VIRUS CORE PROTEIN UPREGULATES SERINE PHOSPHORYLATION OF IRS-1 AND IMPAIRS DOWNSTREAM AKT/PKB SIGNALING PATHWAY FOR INSULIN RESISTANCE.
    J Virol. 2007;.
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48. MEYER K , Ait-Goughoulte M, Keck ZY, Foung S, et al
    ANTIBODY DEPENDENT ENHANCEMENT OF HEPATITIS C INFECTION.
    J Virol. 2007;.
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49. SHIH HH , Jeng KS, Syu WJ, Huang YH, et al
    HEPATITIS B SURFACE ANTIGEN LEVELS AND SEQUENCES OF NATURAL HEPATITIS B VIRUS VARIANTS INFLUENCE THE ASSEMBLY AND SECRETION OF HEPATITIS D VIRUS.
    J Virol. 2007;.
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50. STOHLMAN SA , Hinton DR, Parra B, Atkinson R, et al
    CD4 T cells contribute to virus control and pathology following CNS infection by neurotropic mouse hepatitis virus.
    J Virol. 2007;.
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51. TARGETT-ADAMS P , Boulant S, McLauchlan J
    Visualization of double-stranded RNA in cells supporting hepatitis C virus RNA replication.
    J Virol. 2007;.
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52. BAKHSHESH M , Groppelli E, Willcocks MM, Royall E, et al
    The Picornavirus Avian Encephalomyelitis Virus possesses a Hepatitis C Virus-like internal ribosome entry site (IRES) element.
    J Virol. 2007;.
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53. JIANG D , Guo H, Xu C, Chang J, et al
    Identification of Three Interferon Inducible Cellular Enzymes that Inhibit the Replication of Hepatitis C Virus.
    J Virol. 2007;.
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54. GASTAMINZA P , Cheng G, Wieland S, Zhong J, et al
    Cellular determinants of hepatitis C virus assembly, maturation, degradation and secretion.
    J Virol. 2007;.
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55. AIT-GOUGHOULTE M , Kanda T, Meyer K, Ryerse JS, et al
    HEPATITIS C VIRUS GENOTYPE 1a GROWTH AND INDUCTION OF AUTOPHAGY.
    J Virol. 2007;.
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56. ARAGONES L , Bosch A, Pinto RM
    Hepatitis A virus mutant spectra under the selective pressure of monoclonal antibodies: codon usage constraints limit capsid variability.
    J Virol. 2007;.
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57. VORREITER J , Leifer I, Rosler C, Jackevica L, et al
    Monoclonal antibodies providing topological information on the duck hepatitis B virus core protein and avihepadnaviral nucleocapsid structure.
    J Virol. 2007;81:13230-4.
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    November 2007
58. SMYK-PEARSON S , Tester IA, Klarquist J, Palmer BE, et al
    Spontaneous Recovery in Acute Human HCV Infection: Functional T Cell Thresholds and Relative Importance of CD4 Help.
    J Virol. 2007;.
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59. MEHTA AS , Long RE, Comunale MA, Rodemich L, et al
    Increased levels of galactose-deficient anti-gal IgG in the sera of HCV infected individuals with fibrosis and cirrhosis.
    J Virol. 2007;.
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60. CHANG J , Nie X, Chang HE, Han Z, et al
    Transcription of Hepatitis Delta Virus RNA by RNA Polymerase II.
    J Virol. 2007;.
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61. TELLINGHUISEN TL , Foss KL, Treadaway JC, Rice CM, et al
    Identification of Residues Required for RNA Replication in Domains II and III of the Hepatitis C Virus NS5A Protein.
    J Virol. 2007;.
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62. MCROY WC , Baric RS
    Amino Acid Substitutions in the S2 Subunit of Mouse Hepatitis Virus Variant V51 Encode Determinants of Host Range Expansion.
    J Virol. 2007;.
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63. GRAFF J , Zhou YH, Torian U, Nguyen H, et al
    MUTATIONS WITHIN POTENTIAL GLYCOSYLATION SITES IN THE CAPSID PROTEIN OF HEPATITIS E VIRUS PREVENT THE FORMATION OF INFECTIOUS VIRUS PARTICLES.
    J Virol. 2007;.
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64. HUANG WH , Chen YS, Chen PJ
    Nucleolar Targeting of Hepatitis Delta Antigen Abolishes Its Ability to Initiate Viral Antigenomic RNA Replication.
    J Virol. 2007;.
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65. PEROTTI M , Mancini N, Diotti RA, Tarr AW, et al
    IDENTIFICATION OF A BROADLY CROSS-REACTING AND NEUTRALIZING HUMAN MONOCLONAL ANTIBODY DIRECTED AGAINST THE HCV\E2 PROTEIN.
    J Virol. 2007;.
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66. MCCLAIN SL , Clippinger AJ, Lizzano R, Bouchard MJ, et al
    Hepatitis B virus replication is associated with an HBx-dependent mitochondrion-regulated increase in cytosolic calcium levels.
    J Virol. 2007;81:12061-5.
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67. ABRAHAM TM , Loeb DD
    The topology of hepatitis B virus pregenomic RNA promotes its replication.
    J Virol. 2007;81:11577-84.
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    October 2007
68. MEUNIER JC , Russell RS, Goossens V, Priem S, et al
    Isolation and characterization of broadly neutralizing human monoclonal antibodies to E1 glycoprotein of hepatitis C virus.
    J Virol. 2007;.
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69. MEE CJ , Grove J, Harris HJ, Hu K, et al
    Effect of cell polarization on hepatitis C virus viral entry.
    J Virol. 2007;.
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70. MOLINA S , Castet V, Pichard-Garcia L, Wychowski C, et al
    Serum derived HCV infection of primary human hepatocytes is tetraspanin CD81 dependent.
    J Virol. 2007;.
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71. YOU S , Rice CM
    3' RNA elements in hepatitis C virus replication: Kissing partners and long poly (U).
    J Virol. 2007;.
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72. DEPLA E , Van der Aa A, Livingston BD, Crimi C, et al
    Rational design of a multi-epitope vaccine encoding T-lymphocyte epitopes for treatment of chronic HBV infections.
    J Virol. 2007;.
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73. CHANG KS , Jiang J, Cai Z, Luo G, et al
    Human apolipoprotein E is required for Infectivity and Production of Hepatitis C Virus in Cell Culture.
    J Virol. 2007;.
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74. DEMING DJ , Graham RL, Denison MR, Baric RS, et al
    Processing of open reading frame 1a replicase proteins nsp7 to nsp10 in murine hepatitis virus strain A59 replication.
    J Virol. 2007;81:10280-91.
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    September 2007
75. ABOU-JAOUDE G , Sureau C
    Entry of hepatitis delta virus requires the conserved cysteine residues of the hepatitis B envelope protein antigenic loop and is blocked by inhibitors of thiol-disulphide exchange.
    J Virol. 2007;.
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76. KANG H , Bhardwaj K, Li Y, Palaninathan S, et al
    Biochemical and Genetic Analyses of the Mouse Hepatitis Virus Nsp15 Endoribonuclease.
    J Virol. 2007;.
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77. KAUL A , Woerz I, Meuleman P, Leroux-Roels G, et al
    Cell culture adaptation of hepatitis C virus and in vivo viability of an adapted variant.
    J Virol. 2007;.
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78. NASSAL M , Leifer I, Wingert I, Dallmeier K, et al
    A structural model for the duck hepatitis B virus core protein derived by extensive mutagenesis.
    J Virol. 2007;.
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79. SPARKS JS , Lu X, Denison MR
    Genetic Analysis of Murine Hepatitis Virus nsp4 in Virus Replication.
    J Virol. 2007;.
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80. ARIUMI Y , Kuroki M, Abe KI, Dansako H, et al
    DDX3 DEAD box RNA helicase is required for hepatitis C virus (HCV) RNA replication.
    J Virol. 2007;.
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81. KANDA T , Steele R, Ray R, Ray RB, et al
    HEPATITIS C VIRUS INFECTION INDUCES INTERFERON-{beta} SIGNALING PATHWAY IN IMMORTALIZED HUMAN HEPATOCYTES.
    J Virol. 2007;.
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82. ECKERLE LD , Lu X, Sperry SM, Choi L, et al
    High Fidelity of Murine Hepatitis Virus Replication Is Decreased in nsp14-Exoribonuclease Mutants.
    J Virol. 2007;.
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83. GUO H , Jiang D, Zhou T, Cuconati A, et al
    Characterization of the Intracellular Deproteinized Relaxed Circular DNA of Hepatitis B Virus: An Intermediate of Covalently Closed Circular DNA Formation.
    J Virol. 2007;.
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84. ZHENG A , Yuan F, Li Y, Zhu F, et al
    Claudin-6 and Claudin-9 Function as Additional co-Receptors for Hepatitis C Virus.
    J Virol. 2007;.
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    August 2007
85. NOPPORNPANTH S , Smits SL, Lien TX, Poovorawan Y, et al
    Characterization of Hepatitis C Virus Deletion Mutants Circulating in Chronically Infected Patients.
    J Virol. 2007;.
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86. KUNTZEN T , Timm J, Berical A, Lewis-Ximenez LL, et al
    Viral Sequence Evolution in Acute HCV Infection.
    J Virol. 2007;.
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87. SKLAN EH , Staschke K, Oakes TM, Elazar M, et al
    A Rab-GAP TBC Domain Protein Binds Hepatitis C Virus NS5A and Mediates Viral Replication.
    J Virol. 2007;.
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88. CHAI N , Chang HE, Nicolas E, Gudima S, et al
    Assembly of hepatitis B virus envelope proteins onto a lentivirus pseudotype that infects primary human hepatocytes.
    J Virol. 2007;.
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89. MURAYAMA A , Date T, Morikawa K, Akazawa D, et al
    The NS3 helicase and NS5B-to-3'X regions are important for efficient hepatitis C virus strain JFH-1 replication in Huh7 cells.
    J Virol. 2007;81:8030-40.
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    July 2007
90. MENNE S , Tennant BC, Gerin JL, Cote PJ, et al
    Chemo-Immunotherapy of Chronic Hepatitis B Virus Infection in, the Woodchuck Model Breaks Immunologic Tolerance and Restores, T cell Responses to PreS- and S-Regions of the Viral Envelope Protein.
    J Virol. 2007;.
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91. JOST S , Turelli P, Mangeat B, Protzer U, et al
    Induction of antiviral cytidine deaminases does not explain the inhibition of hepatitis B virus replication by interferons.
    J Virol. 2007;.
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92. MURRAY CL , Jones CT, Tassello J, Rice CM, et al
    Alanine Scanning of the Hepatitis C Virus Core Protein Reveals Numerous Residues Essential for Infectious Virus Production.
    J Virol. 2007;.
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93. REYES DEL VALLE J , Devaux P, Hodge G, Wegner NJ, et al
    A vectored measles virus induces hepatitis B surface antigen antibodies while protecting macaques against measles challenge.
    J Virol. 2007;.
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94. EIFART P , Ludwig K, Bottcher C, de Haan CA, et al
    The Role of Endocytosis and low pH in Cell Entry of the Murine Hepatitis Virus MHV-A59.
    J Virol. 2007;.
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95. NASIMUZZAMAN M , Waris G, Mikolon D, Stupack DG, et al
    Hepatitis C Virus Stabilizes Hypoxia-Inducible Factor-1{alpha} (HIF-1{alpha}) and Stimulates the Synthesis of Vascular Endothelial Growth Factor (VEGF).
    J Virol. 2007;.
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96. GUO H , Zhou T, Jiang D, Cuconati A, et al
    Regulation of Hepatitis B Virus Replication by Phosphoatidylinositol 3-kinase-Akt Signal Transduction Pathway.
    J Virol. 2007;.
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97. CHANG KO , George DW
    Bile Acids Promote the Expression of Hepatitis C Virus in Replicon-Harboring Cells.
    J Virol. 2007;.
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98. PURO R , Schneider RJ
    Tumor necrosis factor activates a conserved innate antiviral response to hepatitis B virus that destabilizes nucleocapsids and reduces nuclear viral DNA.
    J Virol. 2007;81:7351-62.
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    June 2007
99. MCCAFFREY K , Boo I, Poumbourios P, Drummer HE, et al
    Expression and characterisation of a minimal HCV glycoprotein E2 core domain that retains CD81 binding.
    J Virol. 2007;.
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