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	Amedeo Prize 2008 The 21 Finalists

Bacterial Infections and Mycoses

Free Subscription Articles published in J Clin Microbiol Retrieve available abstracts of 605 articles: HTML format

Single Articles

April 2008
1. BUHLMANN M , Bogli-Stuber K, Droz S, Muhlemann K, et al
   Rapid screening for carriage of Methicillin-resistant Staphylococcus aureus by polymerase chain reaction and associated costs.
   J Clin Microbiol. 2008;.
   PubMed     Related articles    Abstract available
   
   
   
2. DESNOS-OLLIVIER M , Dromer F, Dannaoui E
   Detection of caspofungin resistance in Candida spp. by Etest(R).
   J Clin Microbiol. 2008;.
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3. GRANDJEAN L , Martin L, Gilman RH, Valencia T, et al
   Direct Tuberculosis Culture in Selective Broth Without Decontamination or Centrifugation.
   J Clin Microbiol. 2008;.
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4. MEHTA MS , Paule SM, Hacek DM, Thomson RB, et al
   Optimization of the Roche PCR Analyte Specific Reagent Assay for Detection of Staphylococcus aureus, Methicillin-Resistant S. aureus (MRSA) and Vancomycin-Resistant Enterococcus species.
   J Clin Microbiol. 2008;.
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5. GRABSCH EA , Chua K, Xie S, Byrne J, et al
   vanB2 Enterococcus faecium with Vancomycin Susceptible Phenotype - Improved Detection by Etest Using Oxgall Supplementation.
   J Clin Microbiol. 2008;.
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6. SEVERIN JA , Lestari ES, Kuntaman K, Melles DC, et al
   Unusually High Prevalence of Panton-Valentine Leukocidin Genes among Methicillin-Sensitive Staphylococcus aureus carried in the Indonesian Population.
   J Clin Microbiol. 2008;.
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7. CORTES PR , Albarracin Orio AG, Regueira M, Pinas GE, et al
   Characterization of in vitro-generated and clinical optochin-resistant strains of Streptococcus pneumoniae isolated from Argentina.
   J Clin Microbiol. 2008;.
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8. MEISAL R , Hoiby EA, Aaberge IS, Caugant DA, et al
   Sequence Type and emm-Type Diversity in Streptococcus pyogenes Isolates Causing Invasive Disease in Norway between 1988 and 2003.
   J Clin Microbiol. 2008;.
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9. COLLINS J , Buckling A, Massey RC
   The identification of factors contributing to the T-cell toxicity of Staphylococcus aureus clinical isolates.
   J Clin Microbiol. 2008;.
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10. LEVETT PN , Brandt K, Olenius K, Brown C, et al
    Evaluation of three automated nucleic acid amplification systems for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in first void urine specimens.
    J Clin Microbiol. 2008;.
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11. CHEE CB , Gan SH, Khinmar KW, Barkham TM, et al
    SENSITIVITY COMPARISON OF TWO COMMERCIAL INTERFERON-GAMMA RELEASE ASSAYS IN PULMONARY TUBERCULOSIS.
    J Clin Microbiol. 2008;.
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12. PIAU C , Jehan J, Leclercq R, Daurel C, et al
    A Catalase Negative Staphylococcus aureus with Point Mutations in the katA Gene.
    J Clin Microbiol. 2008;.
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13. HUI M , Lam WH, Ho WH, Chan CY, et al
    Endophthalmitis: potential benefits of repeated intravitreal injections of antibiotics.
    J Clin Microbiol. 2008;46:1573.
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14. LI Y , Li Q, Du Y, Jiang X, et al
    Prevalence of plasmid-mediated AmpC beta-lactamases in a Chinese university hospital from 2003 to 2005: first report of CMY-2-Type AmpC beta-lactamase resistance in China.
    J Clin Microbiol. 2008;46:1317-21.
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15. RIEDEL S , Bourbeau P, Swartz B, Brecher S, et al
    Timing of specimen collection for blood cultures from febrile patients with bacteremia.
    J Clin Microbiol. 2008;46:1381-5.
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16. YANG S , Ramachandran P, Hardick A, Hsieh YH, et al
    Rapid PCR-based diagnosis of septic arthritis by early Gram-type classification and pathogen identification.
    J Clin Microbiol. 2008;46:1386-90.
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17. TRNOVSKY J , Merz W, Della-Latta P, Wu F, et al
    Rapid and accurate identification of Candida albicans isolates by use of PNA FISHFlow.
    J Clin Microbiol. 2008;46:1537-40.
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18. CREMNITER J , Bauer T, Lortat-Jacob A, Vodovar D, et al
    Prosthetic hip infection caused by Tropheryma whipplei.
    J Clin Microbiol. 2008;46:1556-7.
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19. DAMBORG P , Guardabassi L, Pedersen K, Kokotovic B, et al
    Comparative analysis of human and canine Campylobacter upsaliensis isolates by amplified fragment length polymorphism.
    J Clin Microbiol. 2008;46:1504-6.
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20. AKERLUND T , Persson I, Unemo M, Noren T, et al
    Increased sporulation rate of epidemic Clostridium difficile Type 027/NAP1.
    J Clin Microbiol. 2008;46:1530-3.
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21. TALUKDER KA , Aslam M, Islam Z, Azmi IJ, et al
    Prevalence of virulence genes and cytolethal distending toxin production in Campylobacter jejuni isolates from diarrheal patients in Bangladesh.
    J Clin Microbiol. 2008;46:1485-8.
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22. ESPOSITO S , Bosis S, Niesters HG, Tremolati E, et al
    Impact of human bocavirus on children and their families.
    J Clin Microbiol. 2008;46:1337-42.
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23. GIAKKOUPI P , Vourli S, Polemis M, Kalapothaki V, et al
    Supplementation of growth media with Zn2+ facilitates detection of VIM-2-producing Pseudomonas aeruginosa.
    J Clin Microbiol. 2008;46:1568-9.
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24. ALVAREZ J , Garcia IG, Aranaz A, Bezos J, et al
    Genetic diversity of Mycobacterium avium isolates recovered from clinical samples and from the environment: molecular characterization for diagnostic purposes.
    J Clin Microbiol. 2008;46:1246-51.
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25. SULAIMAN IM , Sammons SA, Wohlhueter RM
    Smallpox virus resequencing GeneChips can also rapidly ascertain species status for some zoonotic non-variola orthopoxviruses.
    J Clin Microbiol. 2008;46:1507-9.
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26. GRIFFITHS TA , Rioux K, De Buck J
    Sequence polymorphisms in a surface PPE protein distinguish types I, II, and III of Mycobacterium avium subsp. paratuberculosis.
    J Clin Microbiol. 2008;46:1207-12.
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27. IVANCIC V , Mastali M, Percy N, Gornbein J, et al
    Rapid antimicrobial susceptibility determination of uropathogens in clinical urine specimens by use of ATP bioluminescence.
    J Clin Microbiol. 2008;46:1213-9.
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28. SHARMA S , Ray P, Gentsch JR, Glass RI, et al
    Emergence of G12 rotavirus strains in Delhi, India, in 2000 to 2007.
    J Clin Microbiol. 2008;46:1343-8.
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29. HU Q , Coburn B, Deng W, Li Y, et al
    Salmonella enterica serovar Senftenberg human clinical isolates lacking SPI-1.
    J Clin Microbiol. 2008;46:1330-6.
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30. GLASSON JH , Guthrie LH, Nielsen DJ, Bethell FA, et al
    Evaluation of an Automated Instrument for Inoculating and Spreading Samples onto Agar Plates.
    J Clin Microbiol. 2008;46:1281-4.
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31. SAVINI V , Catavitello C, Talia M, Manna A, et al
    Multidrug-resistant Escherichia fergusonii: a case of acute cystitis.
    J Clin Microbiol. 2008;46:1551-2.
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32. CHEN Y , Knabel SJ
    Prophages in Listeria monocytogenes contain single-nucleotide polymorphisms that differentiate outbreak clones within epidemic clones.
    J Clin Microbiol. 2008;46:1478-84.
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33. CONVILLE PS , Brown JM, Steigerwalt AG, Brown-Elliott BA, et al
    Nocardia wallacei sp. nov. and Nocardia blacklockiae sp. nov., human pathogens and members of the "Nocardia transvalensis Complex".
    J Clin Microbiol. 2008;46:1178-84.
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34. GILLIGAN PH
    Is a two-step glutamate dehyrogenase antigen-cytotoxicity neutralization assay algorithm superior to the premier toxin A and B enzyme immunoassay for laboratory detection of Clostridium difficile?
    J Clin Microbiol. 2008;46:1523-5.
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35. KAWATSU K , Kumeda Y, Taguchi M, Yamazaki-Matsune W, et al
    Development and evaluation of immunochromatographic assay for simple and rapid detection of Campylobacter jejuni and Campylobacter coli in human stool specimens.
    J Clin Microbiol. 2008;46:1226-31.
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36. MOREIRA FC , Vieira MA, Ferreira AJ, Girao DM, et al
    Escherichia coli strains of serotype O51:H40 comprise typical and atypical enteropathogenic E. coli strains and are potentially diarrheagenic.
    J Clin Microbiol. 2008;46:1462-5.
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37. ZLOSNIK JE , Hird TJ, Fraenkel MC, Moreira LM, et al
    Differential mucoid exopolysaccharide production by members of the Burkholderia cepacia complex.
    J Clin Microbiol. 2008;46:1470-3.
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38. VALESCO M
    Stability of frozen, heat-killed cultures of Coccidioides immitis as positive- control material in the gen-probe AccuProbe Coccidioides immitis culture identification test.
    J Clin Microbiol. 2008;46:1565.
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39. SPERRY KE , Kathariou S, Edwards JS, Wolf LA, et al
    Multiple-locus variable-number tandem-repeat analysis as a tool for subtyping Listeria monocytogenes strains.
    J Clin Microbiol. 2008;46:1435-50.
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40. NAGANO N , Isomine S, Kato H, Sasaki Y, et al
    Human fulminant gas gangrene caused by Clostridium chauvoei.
    J Clin Microbiol. 2008;46:1545-7.
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41. AMBERT-BALAY K , Lorrot M, Bon F, Giraudon H, et al
    Prevalence and genetic diversity of Aichi virus strains in stool samples from community and hospitalized patients.
    J Clin Microbiol. 2008;46:1252-8.
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42. CASSON N , Posfay-Barbe KM, Gervaix A, Greub G, et al
    New diagnostic real-time PCR for specific detection of Parachlamydia acanthamoebae DNA in clinical samples.
    J Clin Microbiol. 2008;46:1491-3.
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43. TRIBBLE DR , Baqar S, Pang LW, Mason C, et al
    Diagnostic approach to acute diarrheal illness in a military population on training exercises in Thailand, a region of campylobacter hyperendemicity.
    J Clin Microbiol. 2008;46:1418-25.
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44. MAIGRE L , Citti C, Marenda M, Poumarat F, et al
    Suppression-subtractive hybridization as a strategy to identify taxon-specific sequences within the Mycoplasma mycoides Cluster: design and validation of an M. capricolum subsp. capricolum-specific PCR assay.
    J Clin Microbiol. 2008;46:1307-16.
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45. LAGACE-WIENS PR , Alfa MJ, Manickam K, Harding GK, et al
    Reductions in workload and reporting time by use of methicillin-resistant Staphylococcus aureus screening with MRSASelect medium compared to mannitol-salt medium supplemented with oxacillin.
    J Clin Microbiol. 2008;46:1174-7.
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46. BARENFANGER J , Mueller T, O'Brien J, Drake C, et al
    Prevalence of human metapneumovirus in central illinois in patients thought to have respiratory viral infection.
    J Clin Microbiol. 2008;46:1489-90.
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47. KHARE S , Adams LG, Osterstock J, Roussel A, et al
    Effects of shipping and storage conditions of fecal samples on viability of Mycobacterium paratuberculosis.
    J Clin Microbiol. 2008;46:1561-2.
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48. AAS JA , Griffen AL, Dardis SR, Lee AM, et al
    Bacteria of dental caries in primary and permanent teeth in children and young adults.
    J Clin Microbiol. 2008;46:1407-17.
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49. KIM DM , Kang DW, Kim JO, Chung JH, et al
    Acute renal failure due to acute tubular necrosis caused by direct invasion of Orientia tsutsugamushi.
    J Clin Microbiol. 2008;46:1548-50.
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    March 2008
50. HANSEN D , Healy M, Reece K, Smith C, et al
    Repetitive-Sequenced-Based PCR using the DiversiLab System for Identification of Aspergillus species.
    J Clin Microbiol. 2008;.
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51. PETTI CA , Simmon KE, Miro JM, Hoen B, et al
    Genotypic Diversity of Coagulase-Negative Staphylococcal Endocarditis: A Global Perspective.
    J Clin Microbiol. 2008;.
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52. SOMOSKOVI A , Dormandy J, Rivenburg J, Pedrosa M, et al
    Direct comparison of the Genotype MTBC and genomic deletion assays in terms of their ability to distinguish between members of the Mycobacterium tuberculosis complex in clinical isolates and in clinical specimens.
    J Clin Microbiol. 2008;.
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53. FRANCOIS P , Uckay I, Iten A, Renzi G, et al
    In vivo detection of clonally-derived methicillin-resistant/methicillin-susceptible Staphylococcus aureus is not a rare event.
    J Clin Microbiol. 2008;.
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54. FRANCESCONI A , Kasai M, Harrington SM, Beveridge MG, et al
    Automated and Manual Methods of DNA Extraction for Aspergillus fumigatus and Rhizopus oryzae Analyzed by Quantitative Real-Time Polymerase Chain Reaction.
    J Clin Microbiol. 2008;.
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55. TAKAHASHI T , Tamura M, Asami Y, Kitamura E, et al
    Novel "wide range" quantitative nested real-time PCR assay for Mycobacterium tuberculosis DNA --Development and Methodology--
    J Clin Microbiol. 2008;.
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56. TAKAHASHI T , Tamura M, Asami Y, Kitamura E, et al
    Novel "wide range" quantitative nested real-time PCR assay for Mycobacterium tuberculosis DNA--Clinical Application for Diagnosis of Tuberculous Meningitis--
    J Clin Microbiol. 2008;.
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57. SOLA C , Saka HA, Vindel A, Bocco JL, et al
    Emergence and Dissemination of a Community-Associated Methicillin resistant Staphylococcus aureus clone - Panton-Valentin Leucocidin positive sharing the ST5 lineage with the most prevalent nosocomial clone in the same region of Argentina.
    J Clin Microbiol. 2008;.
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58. MALHOTRA-KUMAR S , Haccuria K, Michiels M, Ieven M, et al
    Current Trends in Rapid Diagnostics for Methicillin-Resistant Staphylococcus aureus and Glycopeptide-Resistant Enterococcus.
    J Clin Microbiol. 2008;.
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59. BRIDGEFORD EC , Fox JG, Nambiar PR, Rogers AB, et al
    Agammaglobulinemia and Staphylococcus aureus botryomycosis in a cohort of related sentinel Swiss Webster mice.
    J Clin Microbiol. 2008;.
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60. SCHNEIDER M , Muhlemann K, Droz S, Couzinet S, et al
    Clinical Characteristics Associated with the Isolation of Small Colony Variants of Staphylococcus aureus and Pseudomonas aeruginosa from Respiratory Secretions of Patients with Cystic Fibrosis.
    J Clin Microbiol. 2008;.
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61. SZABO Z , Toth B, Kovacs M, Kardos G, et al
    Evaluation of the new MICRONAUT-Candida system for yeast identification against the API ID32C method.
    J Clin Microbiol. 2008;.
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62. CLANCY CJ , Nguyen ML, Cheng S, Huang H, et al
    IgG responses against a panel of Candida albicans antigens are accurate and early markers for systemic candidiasis.
    J Clin Microbiol. 2008;.
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63. GOORHUIS A , Debast SB, van Leengoed LA, Harmanus C, et al
    Clostridium difficile PCR ribotype 078: an emerging strain in humans and in pigs?
    J Clin Microbiol. 2008;46:1157.
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64. NICOLA FG
    Assessing how many blood cultures are needed for detecting bloodstream infections.
    J Clin Microbiol. 2008;46:1155-6.
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65. BIENDO M , Canarelli B, Thomas D, Rousseau F, et al
    Successive emergence of extended-spectrum beta-lactamase-producing and carbapenemase-producing Enterobacter aerogenes isolates in a university hospital.
    J Clin Microbiol. 2008;46:1037-44.
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66. SCHMOLDT S , Schuhegger R, Wendler T, Huber I, et al
    Molecular evidence of nosocomial Pneumocystis jirovecii transmission among 16 patients after kidney transplantation.
    J Clin Microbiol. 2008;46:966-71.
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67. GORGE O , Lopez S, Hilaire V, Lisanti O, et al
    Selection and validation of a multilocus variable-number tandem-repeat analysis panel for typing Shigella spp.
    J Clin Microbiol. 2008;46:1026-36.
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68. FAWLEY WN , Freeman J, Smith C, Harmanus C, et al
    Use of highly discriminatory fingerprinting to analyze clusters of Clostridium difficile infection cases due to epidemic ribotype 027 strains.
    J Clin Microbiol. 2008;46:954-60.
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69. JORDA-VARGAS L , Castaneda NC, Centron D, Degrossi J, et al
    Prevalence of indeterminate genetic species of Burkholderia cepacia complex in a cystic fibrosis center in Argentina.
    J Clin Microbiol. 2008;46:1151-2.
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70. KIM H , Riley TV, Kim M, Kim CK, et al
    Increasing prevalence of toxin A-negative, toxin B-positive isolates of Clostridium difficile in Korea: impact on laboratory diagnosis.
    J Clin Microbiol. 2008;46:1116-7.
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71. MAUS MV , Posencheg MA, Geddes K, Elkan M, et al
    Detection of echovirus 18 in human breast milk.
    J Clin Microbiol. 2008;46:1137-40.
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72. TOKATLIDOU D , Tsivitanidou M, Pournaras S, Ikonomidis A, et al
    Outbreak caused by a multidrug-resistant Klebsiella pneumoniae clone carrying blaVIM-12 in a university hospital.
    J Clin Microbiol. 2008;46:1005-8.
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73. LAU SH , Reddy S, Cheesbrough J, Bolton FJ, et al
    Major uropathogenic Escherichia coli strain isolated in the northwest of England identified by multilocus sequence typing.
    J Clin Microbiol. 2008;46:1076-80.
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74. CHEN KJ , Hou CH, Sun MH, Lai CC, et al
    Endophthalmitis caused by Acinetobacter baumannii: report of two cases.
    J Clin Microbiol. 2008;46:1148-50.
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75. HASHIDA K , Shiomori T, Hohchi N, Muratani T, et al
    Nasopharyngeal Haemophilus influenzae carriage in Japanese children attending day-care centers.
    J Clin Microbiol. 2008;46:876-81.
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76. GONULLU N , Aktas Z, Kayacan CB, Salcioglu M, et al
    Dissemination of CTX-M-15 beta-lactamase genes carried on Inc FI and FII plasmids among clinical isolates of Escherichia coli in a university hospital in Istanbul, Turkey.
    J Clin Microbiol. 2008;46:1110-2.
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77. VIANA-NIERO C , Lima KV, Lopes ML, Rabello MC, et al
    Molecular characterization of Mycobacterium massiliense and Mycobacterium bolletii in isolates collected from outbreaks of infections after laparoscopic surgeries and cosmetic procedures.
    J Clin Microbiol. 2008;46:850-5.
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78. MOBIUS P , Luyven G, Hotzel H, Kohler H, et al
    High genetic diversity among Mycobacterium avium subsp. paratuberculosis strains from German cattle herds shown by combination of IS900 restriction fragment length polymorphism analysis and mycobacterial interspersed repetitive unit-variable-number tande
    J Clin Microbiol. 2008;46:972-81.
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79. ARIAS CA , Vallejo M, Reyes J, Panesso D, et al
    Clinical and microbiological aspects of linezolid resistance mediated by the cfr gene encoding a 23S rRNA methyltransferase.
    J Clin Microbiol. 2008;46:892-6.
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80. BUIJTELS PC , Willemse-Erix HF, Petit PL, Endtz HP, et al
    Rapid identification of mycobacteria by Raman spectroscopy.
    J Clin Microbiol. 2008;46:961-5.
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81. VAN RIE A , Fitzgerald D, Kabuya G, Van Deun A, et al
    Sputum smear microscopy: evaluation of impact of training, microscope distribution, and use of external quality assessment guidelines for resource-poor settings.
    J Clin Microbiol. 2008;46:897-901.
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82. KIKUTA H , Sakata C, Gamo R, Ishizaka A, et al
    Comparison of a lateral-flow immunochromatography assay with real-time reverse transcription-PCR for detection of human metapneumovirus.
    J Clin Microbiol. 2008;46:928-32.
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83. HIEN BT , Scheutz F, Cam PD, Serichantalergs O, et al
    Diarrheagenic Escherichia coli and Shigella strains isolated from children in a hospital case-control study in Hanoi, Vietnam.
    J Clin Microbiol. 2008;46:996-1004.
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84. GUARRO J , Gugnani HC, Sood N, Batra R, et al
    Subcutaneous phaeohyphomycosis caused by Wallemia sebi in an immunocompetent host.
    J Clin Microbiol. 2008;46:1129-31.
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85. PERSAT F , Ranque S, Derouin F, Michel-Nguyen A, et al
    Contribution of the (1-->3)-beta-D-glucan assay for diagnosis of invasive fungal infections.
    J Clin Microbiol. 2008;46:1009-13.
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86. CAMPA D , Tavanti A, Gemignani F, Mogavero CS, et al
    DNA microarray based on arrayed-primer extension technique for identification of pathogenic fungi responsible for invasive and superficial mycoses.
    J Clin Microbiol. 2008;46:909-15.
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87. ADDERSON EE , Boudreaux JW, Cummings JR, Pounds S, et al
    Identification of clinical coryneform bacterial isolates: comparison of biochemical methods and sequence analysis of 16S rRNA and rpoB genes.
    J Clin Microbiol. 2008;46:921-7.
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88. SEKI M , Poulsen K, Haubek D, Kilian M, et al
    Novel loop-mediated isothermal amplification method for detection of the JP2 clone of Aggregatibacter actinomycetemcomitans in subgingival plaque.
    J Clin Microbiol. 2008;46:1113-5.
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    February 2008
89. VERMITSKY JP , Self MJ, Chadwick SG, Trama JP, et al
    A Survey of Vaginal-flora Candida species of Different Age Groups Using species-specific PCR Detection.
    J Clin Microbiol. 2008;.
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90. TANAKA D , Isobe J, Watahiki M, Nagai Y, et al
    Genetic features of clinical isolates of Streptococcus dysgalactiae subsp. equisimilis possessing Lancefield's group A antigen.
    J Clin Microbiol. 2008;.
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91. HOEK PK , Gey van Pittius CN, Moolman-Smook H, Carelse-Tofa K, et al
    Fluorometric Assay For Susceptibility Testing of Rifampicin in Mycobacterium tuberculosis Complex (FAST-Rif).
    J Clin Microbiol. 2008;.
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92. DESCLOUX S , Rossano A, Perreten V
    Characterization of new Staphylococcal Cassette Chromosome mec (SCCmec) and topoisomerase genes in fluoroquinolone and methicillin-resistant Staphylococcus pseudintermedius.
    J Clin Microbiol. 2008;.
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93. MENNINK-KERSTEN MA , Ruegebrink D, Klont RR, Warris A, et al
    Improved Detection of Circulating Aspergillus Antigen Using a Modified Pre-treatment Procedure.
    J Clin Microbiol. 2008;.
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