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Articles published in J Clin Microbiol

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    May 2017
  1. MONTESINOS I, Argudin MA, Hites M, Ahajjam F, et al
    Culture based methods and molecular tools for azole-resistant Aspergillus fumigatus detection in a Belgian University hospital.
    J Clin Microbiol. 2017 May 17. pii: JCM.00520-17. doi: 10.1128/JCM.00520.
    PubMed     Text format     Abstract available


  2. SAHA SK, Ahmed ZB, Modak JK, Naziat H, et al
    Group B Streptococcus among pregnant women and newborns in Mirzapur, Bangladesh: Colonization, vertical transmission and serotype distribution.
    J Clin Microbiol. 2017 May 17. pii: JCM.00380-17. doi: 10.1128/JCM.00380.
    PubMed     Text format     Abstract available


  3. WHITE PL, Posso RB, Barnes RA
    An analytical and clinical evaluation of the PathoNostics AsperGenius(R) Assay for the detection of invasive aspergillosis and resistance to azole antifungal drugs direct from plasma samples.
    J Clin Microbiol. 2017 May 17. pii: JCM.00411-17. doi: 10.1128/JCM.00411.
    PubMed     Text format     Abstract available


  4. TOTTEN M, Ross T, Voskertchian A, Colantuoni E, et al
    Analysis of Morphologically Similar Staphylococcus aureus Colonies to Assess Phenotypic and Genotypic Correlation.
    J Clin Microbiol. 2017 May 10. pii: JCM.00402-17. doi: 10.1128/JCM.00402.
    PubMed     Text format     Abstract available


  5. FONVILLE JM, van Herk CMC, Das PHAC, van de Bovenkamp JHB, et al
    Single negative van qPCR on enrichment broth can replace five rectal swab cultures for the screening of vancomycin-resistent Enterococci.
    J Clin Microbiol. 2017 May 10. pii: JCM.00258-17. doi: 10.1128/JCM.00258.
    PubMed     Text format     Abstract available


  6. GORDON NC, Pichon B, Golubchik T, Wilson DJ, et al
    Whole Genome Sequencing reveals the contribution of long-term carriers in Staphylococcus aureus outbreak investigation.
    J Clin Microbiol. 2017 May 3. pii: JCM.00363-17. doi: 10.1128/JCM.00363.
    PubMed     Text format     Abstract available


  7. DE GROOTE MA, Higgins M, Hraha T, Wall K, et al
    Correction for De Groote et al., "Highly Multiplexed Proteomic Analysis of Quantiferon Supernatants To Identify Biomarkers of Latent Tuberculosis Infection".
    J Clin Microbiol. 2017;55:1598.
    PubMed     Text format    


    April 2017
  8. ANKRUM A, Hall BG
    Population dynamics of Staphylococcus aureus in Cystic Fibrosis patients to determine transmission events utilizing WGS.
    J Clin Microbiol. 2017 Apr 26. pii: JCM.00164-17. doi: 10.1128/JCM.00164.
    PubMed     Text format     Abstract available


  9. ZHOU W, Li H, Zhang Y, Huang M, et al
    Diagnostic Value of the Galactomannan Antigen Test in Serum and Bronchoalveolar Lavage Fluid Samples from Patients with Non-neutropenic Invasive Pulmonary Aspergillosis.
    J Clin Microbiol. 2017 Apr 26. pii: JCM.00345-17. doi: 10.1128/JCM.00345.
    PubMed     Text format     Abstract available


  10. CHURCH DL, Baxter H, Lloyd T, Larios O, et al
    Evaluation of StrepB Select Chromagar and the Fast Track Diagnostics Group B Streptococcus (GBS) real-time polymerase chain reaction assay compared to routine culture for detection of GBS during antepartum screening.
    J Clin Microbiol. 2017 Apr 26. pii: JCM.00043-17. doi: 10.1128/JCM.00043.
    PubMed     Text format     Abstract available


  11. ALAME-EMANE AK, Pierre-Audigier C, Aboumegone-Biyogo OC, Nzoghe-Mveang A, et al
    The use of GeneXpert remnants for drug resistance profiling and molecular epidemiology of tuberculosis in Libreville, Gabon.
    J Clin Microbiol. 2017 Apr 26. pii: JCM.02257-16. doi: 10.1128/JCM.02257.
    PubMed     Text format     Abstract available


  12. WERNGREN J, Alm E, Mansjo M
    Non pncA gene-mutated but pyrazinamide resistant M. tuberculosis, why is that?
    J Clin Microbiol. 2017 Apr 12. pii: JCM.02532-16. doi: 10.1128/JCM.02532.
    PubMed     Text format     Abstract available


  13. GITMAN MR, McTaggart L, Spinato J, Poopalarajah R, et al
    Antifungal susceptibility testing of Aspergillus spp. by using a CCI-based MALDI-ToF MS method appears to not offer benefit over the traditional broth microdilution testing.
    J Clin Microbiol. 2017 Apr 12. pii: JCM.00254-17. doi: 10.1128/JCM.00254.
    PubMed     Text format     Abstract available


  14. CUNNINGHAM SA, Chia N, Jeraldo PR, Quest DJ, et al
    Comparison of Two Whole-Genome Sequencing Methods for Analysis of Three Methicillin-Resistant Staphylococcus aureus Outbreaks.
    J Clin Microbiol. 2017 Apr 12. pii: JCM.00029-17. doi: 10.1128/JCM.00029.
    PubMed     Text format     Abstract available


  15. GEORGHIOU SB, Seifert M, Catanzaro DG, Garfein RS, et al
    Increased Tuberculosis Patient Mortality Associated with Mycobacterium tuberculosis Mutations Conferring Resistance to Second-line Antituberculous Drugs.
    J Clin Microbiol. 2017 Apr 12. pii: JCM.00152-17. doi: 10.1128/JCM.00152.
    PubMed     Text format     Abstract available


  16. SHEA J, Halse TA, Lapierre P, Shudt M, et al
    Comprehensive whole-genome sequencing and reporting of drug resistance profiles on clinical cases of Mycobacterium tuberculosis in New York State.
    J Clin Microbiol. 2017 Apr 5. pii: JCM.00298-17. doi: 10.1128/JCM.00298.
    PubMed     Text format     Abstract available


  17. MCCLURE JA, DeLongchamp JZ, Conly JM, Zhang K, et al
    A Novel Multiplex PCR Assay for the Detection of Chlorhexidine/Quaternary Ammonium, Mupirocin and Methicillin Resistance Genes with Simultaneous Discrimination of Staphylococcus aureus from Coagulase-Negative Staphylococci.
    J Clin Microbiol. 2017 Apr 5. pii: JCM.02488-16. doi: 10.1128/JCM.02488.
    PubMed     Text format     Abstract available


    March 2017
  18. CORNICK JE, Kiran AM, Vivancos R, Van Aartsen J, et al
    Epidemiological and molecular characterization of an invasive Group A Streptococcus emm32.2 outbreak.
    J Clin Microbiol. 2017 Mar 29. pii: JCM.00191-17. doi: 10.1128/JCM.00191.
    PubMed     Text format     Abstract available


  19. ADKINS PR, Middleton JR, Calcutt MJ, Stewart GC, et al
    Speciation and strain-typing of Staphylococcus agnetis and Staphylococcus hyicus isolated from bovine milk using a novel multiplex PCR and pulsed-field gel electrophoresis.
    J Clin Microbiol. 2017 Mar 22. pii: JCM.02239-16. doi: 10.1128/JCM.02239.
    PubMed     Text format     Abstract available


  20. ANTHWAL D, Gupta RK, Bhalla M, Bhatnagar S, et al
    Direct detection of Rifampicin and Isoniazid resistance in sputum samples from tuberculosis patients by High Resolution Melt curve analysis.
    J Clin Microbiol. 2017 Mar 22. pii: JCM.02104-16. doi: 10.1128/JCM.02104.
    PubMed     Text format     Abstract available


  21. URABE N, Sakamoto S, Sano G, Suzuki J, et al
    Usefulness of two Aspergillus PCR assays and Aspergillus galactomannan and beta-D-glucan testing of bronchoalveolar lavage fluid for diagnosis of chronic pulmonary aspergillosis.
    J Clin Microbiol. 2017 Mar 22. pii: JCM.02497-16. doi: 10.1128/JCM.02497.
    PubMed     Text format     Abstract available


  22. SIOPI M, Pournaras S, Meletiadis J
    Comparative evaluation of Sensititre YeastOne(R) and CLSI M38-A2 reference method for antifungal susceptibility testing of Aspergillus spp. against echinocandins.
    J Clin Microbiol. 2017 Mar 22. pii: JCM.00044-17. doi: 10.1128/JCM.00044.
    PubMed     Text format     Abstract available


  23. DUPIEUX C, Bouchiat C, Larsen AR, Pichon B, et al
    Detection of mecC-positive Staphylococcus aureus: what to expect from immunological tests targeting PBP2a?
    J Clin Microbiol. 2017 Mar 15. pii: JCM.00068-17. doi: 10.1128/JCM.00068.
    PubMed     Text format     Abstract available


  24. LEE RS, Pai M
    Real-time sequencing of Mycobacterium tuberculosis: are we there yet?
    J Clin Microbiol. 2017 Mar 15. pii: JCM.00358-17. doi: 10.1128/JCM.00358.
    PubMed     Text format     Abstract available


  25. VOTINTSEVA AA, Bradley P, Pankhurst L, Del Ojo Elias C, et al
    Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples.
    J Clin Microbiol. 2017 Mar 8. pii: JCM.02483-16. doi: 10.1128/JCM.02483.
    PubMed     Text format     Abstract available


  26. CHE N, Yang X, Liu Z, Li K, et al
    Rapid detection of cell-free Mycobacterium tuberculosis DNA in tuberculous pleural effusion.
    J Clin Microbiol. 2017 Mar 8. pii: JCM.02473-16. doi: 10.1128/JCM.02473.
    PubMed     Text format     Abstract available


  27. ROCKWOOD N, Wojno J, Ghebrekristos Y, Nicol MP, et al
    Utility of second generation line probe assay (Hain MTBDRplus) directly on 2-month sputa specimens to monitor tuberculosis treatment response.
    J Clin Microbiol. 2017 Mar 1. pii: JCM.00025-17. doi: 10.1128/JCM.00025.
    PubMed     Text format     Abstract available


    February 2017
  28. PEREZ-LAGO L, Herranz M, Navarro Y, Ruiz Serrano MJ, et al
    Clonal complexity in Mycobacterium tuberculosis can hamper diagnostic procedures.
    J Clin Microbiol. 2017 Feb 15. pii: JCM.00149-17. doi: 10.1128/JCM.00149.
    PubMed     Text format     Abstract available


  29. NORHEIM G, Seterelv S, Arnesen TM, Mengshoel AT, et al
    Tuberculosis outbreak in an educational institution in Norway.
    J Clin Microbiol. 2017 Feb 15. pii: JCM.01152-16. doi: 10.1128/JCM.01152.
    PubMed     Text format     Abstract available


  30. LI W, Sun X, Yuan F, Gao Q, et al
    Diagnostic Accuracy of Cerebrospinal Fluid Procalcitonin in Bacterial Meningitis Patients with Empiric Antibiotic Pretreatment.
    J Clin Microbiol. 2017 Feb 8. pii: JCM.02018-16. doi: 10.1128/JCM.02018.
    PubMed     Text format     Abstract available


    January 2017
  31. DENYS GA, Collazo-Velez V, Young S, Daly JA, et al
    Multicenter evaluation of the Portrait Staph ID/R blood culture panel for the rapid identification of Staphylococci and detection of mecA gene.
    J Clin Microbiol. 2017 Jan 25. pii: JCM.02348-16. doi: 10.1128/JCM.02348.
    PubMed     Text format     Abstract available


  32. TESSEMA B, Nabeta P, Valli E, Albertini A, et al
    FIND Tuberculosis Strain Bank: a resource for researchers and developers working on tests to detect Mycobacterium tuberculosis and related drug resistance.
    J Clin Microbiol. 2017 Jan 18. pii: JCM.01662-16. doi: 10.1128/JCM.01662.
    PubMed     Text format     Abstract available


  33. KIRBY JE, Branch-Elliman W, LaSalvia MT, Longhi L, et al
    Investigation of a Candida guilliermondii pseudo-outbreak reveals a novel source of laboratory contamination.
    J Clin Microbiol. 2017 Jan 18. pii: JCM.02336-16. doi: 10.1128/JCM.02336.
    PubMed     Text format     Abstract available


  34. HARJU I, Lange C, Kostrzewa M, Maier T, et al
    Improved Differentiation of Streptococcus pneumoniae and Other S. mitis group Streptococci by MALDI Biotyper Using an Improved MALDI Biotyper Database Content and a Novel Result Interpretation Algorithm.
    J Clin Microbiol. 2017 Jan 4. pii: JCM.01990-16. doi: 10.1128/JCM.01990.
    PubMed     Text format     Abstract available


  35. SIQUEIRA JP, Sutton DA, Gene J, Garcia D, et al
    Multilocus phylogeny and antifungal susceptibility of Aspergillus section Circumdati from clinical samples and description of A. pseudosclerotiorum sp. nov.
    J Clin Microbiol. 2017 Jan 4. pii: JCM.02012-16. doi: 10.1128/JCM.02012.
    PubMed     Text format     Abstract available


  36. SHEWMAKER PL, Whitney AM, Humrighouse BW
    Correction for Shewmaker et al., Phenotypic, Genotypic, and Antimicrobial Characteristics of Streptococcus halichoeri Isolates from Humans, Proposal To Rename Streptococcus halichoeri as Streptococcus halichoeri subsp. halichoeri, and Description of S
    J Clin Microbiol. 2016;55:346.
    PubMed     Text format    


  37. SHEWMAKER PL, Steigerwalt AG, Whitney AM, Morey RE, et al
    Correction for Shewmaker et al., Evaluation of Methods for Identification and Determination of the Taxonomic Status of Strains Belonging to the Streptococcus porcinus-Streptococcus pseudoporcinus Complex Isolated from Animal, Human, and Dairy Sources.
    J Clin Microbiol. 2016;55:345.
    PubMed     Text format    


  38. SHEWMAKER PL, Steigerwalt AG, Nicholson AC, Carvalho MD, et al
    Correction for Shewmaker et al., Reevaluation of the Taxonomic Status of Recently Described Species of Enterococcus: Evidence that E. thailandicus Is a Senior Subjective Synonym of "E. sanguinicola" and Confirmation of E. caccae as a Species Distinct
    J Clin Microbiol. 2016;55:344.
    PubMed     Text format    


  39. ALHHAZMI A, Hurteau D, Tyrrell GJ
    Correction for Alhhazmi et al., Epidemiology of Invasive Group B Streptococcal Disease in Alberta, Canada, from 2003 to 2013.
    J Clin Microbiol. 2016;55:342-343.
    PubMed     Text format    


    December 2016
  40. COMPTON ST, Robertson AE, Lawhon SD, Jenkins SG, et al
    Evaluation of Pyrrolidonyl Arylamidase Activity in Staphylococcus delphini.
    J Clin Microbiol. 2016 Dec 21. pii: JCM.02076-16. doi: 10.1128/JCM.02076.
    PubMed     Text format     Abstract available


  41. RICHTER SS, Musher DM
    The Ongoing Genetic Adaptation of Streptococcus pneumoniae.
    J Clin Microbiol. 2016 Dec 14. pii: JCM.02283.
    PubMed     Text format     Abstract available


  42. GARDEE Y, Dreyer AW, Koornhof HJ, Omar SV, et al
    Evaluation of the Genotype(R) MTBDRsl(R) VER 2.0 assay for second-line drug resistance detection of Mycobacterium tuberculosis isolates in South Africa.
    J Clin Microbiol. 2016 Dec 14. pii: JCM.01865.
    PubMed     Text format     Abstract available


  43. JAUNEIKAITE E, Khan-Orakzai Z, Kapatai G, Bloch S, et al
    Nosocomial outbreak of drug resistant Streptococcus pneumoniae serotype 9V in an adult respiratory medicine ward.
    J Clin Microbiol. 2016 Dec 14. pii: JCM.02405.
    PubMed     Text format     Abstract available


  44. MCHARDY IH, Veltman J, Hindler J, Bruxvoort K, et al
    Clinical and Microbiological Aspects of beta-lactam Resistance in Staphylococcus lugdunensis.
    J Clin Microbiol. 2016 Dec 7. pii: JCM.02092.
    PubMed     Text format     Abstract available


  45. ANAND V, Holmen J, Neely M, Pannaraj PS, et al
    Closing the Brief Case: Neonatal Meningitis Caused by Listeria monocytogenes Diagnosed by Multiplex Molecular Panel.
    J Clin Microbiol. 2016;54:3075.
    PubMed     Text format    


  46. ANAND V, Holmen J, Neely M, Pannaraj PS, et al
    The Brief Case: Neonatal Meningitis Caused by Listeria monocytogenes Diagnosed by Multiplex Molecular Panel.
    J Clin Microbiol. 2016;54:2846-2849.
    PubMed     Text format    


    November 2016
  47. MILLER SA, Karichu J, Kohner P, Cole N, et al
    Multicenter Evaluation of a Modified Cefoxitin Disk Diffusion Method and PBP2a Testing to Predict mecA-mediated oxacillin resistance in atypical Staphylococcus aureus.
    J Clin Microbiol. 2016 Nov 30. pii: JCM.02211.
    PubMed     Text format     Abstract available


  48. WOLLENBERG KR, Desjardins CA, Zalutskaya A, Slodovnikova V, et al
    Whole genome sequencing of Mycobacterium tuberculosis provides insight into the evolution and genetic composition of drug-resistant tuberculosis in Belarus.
    J Clin Microbiol. 2016 Nov 30. pii: JCM.02116.
    PubMed     Text format     Abstract available


  49. MIZUSAWA M, Miller H, Green R, Lee R, et al
    Can a multi-drug resistant Candida auris be reliably identified in clinical microbiology laboratories?
    J Clin Microbiol. 2016 Nov 23. pii: JCM.02202.
    PubMed     Text format     Abstract available


  50. TEATERO S, Ferrieri P, Martin I, Demczuk W, et al
    Serotype distribution, population structure and antimicrobial resistance of Group B Streptococcus strains recovered from colonized pregnant women.
    J Clin Microbiol. 2016 Nov 16. pii: JCM.01615.
    PubMed     Text format     Abstract available


  51. DE GROOTE MA, Higgins M, Hraha T, Wall K, et al
    Highly Multiplexed Proteomic Analysis of Quantiferon Supernatants to Identify Biomarkers of Latent Tuberculosis Infection.
    J Clin Microbiol. 2016 Nov 16. pii: JCM.01646.
    PubMed     Text format     Abstract available


  52. SADAKA C, Kanellos T, Guardabassi L, Boucher J, et al
    Evaluation of Veterinary-Specific Interpretive Criteria for Susceptibility Testing of Streptococcus equi subspecies with Trimethoprim-Sulfamethoxazole and Trimethoprim-Sulfadiazine.
    J Clin Microbiol. 2016 Nov 9. pii: JCM.01610.
    PubMed     Text format     Abstract available


  53. ALBRICH WC, Pride MW, Madhi SA, Callahan J, et al
    Multiplex urinary antigen detection for 13 Streptococcus pneumoniae serotypes improves diagnosis of pneumococcal pneumonia in South African HIV-infected adults.
    J Clin Microbiol. 2016 Nov 9. pii: JCM.01573.
    PubMed     Text format     Abstract available


  54. CHAKRAVORTY S, Roh SS, Glass J, Smith LE, et al
    Highly multiplexed, ten-color detection of isoniazid, fluoroquinolone, amikacin and kanamycin resistant tuberculosis in an automated assay suitable for point-of-care use.
    J Clin Microbiol. 2016 Nov 2. pii: JCM.01771.
    PubMed     Text format     Abstract available


    October 2016
  55. ESCRIBANO P, Munoz P, Montilla P, Padilla B, et al
    Genotyping of Aspergillus fumigatus reveals compartmentalization of genotypes in disseminated disease after invasive pulmonary aspergillosis.
    J Clin Microbiol. 2016 Oct 26. pii: JCM.02037.
    PubMed     Text format     Abstract available


  56. LAUNES C, Casas-Alba D, Fortuny C, Valero-Rello A, et al
    UTILITY OF FILMARRAY MENINGITIS/ENCEPHALITIS PANEL DURING AN OUTBREAK OF ENTEROVIRUS BRAINSTEM ENCEPHALITIS IN CATALONIA (2016).
    J Clin Microbiol. 2016 Oct 26. pii: JCM.01931.
    PubMed     Text format     Abstract available


  57. VAN DER POL B, Williams JA, Fuller D, Taylor SN, et al
    Chlamydia, Gonorrhea and Trichomonas Combined testing using the BD MAX CT/GC/TV Assay using Genitourinary Specimen Types.
    J Clin Microbiol. 2016 Oct 26. pii: JCM.01766.
    PubMed     Text format     Abstract available


  58. LOEFFLER J, Hafner J, Mengoli C, Wirth C, et al
    Prospective biomarker screening for the diagnosis of invasive aspergillosis in high-risk paediatric patients.
    J Clin Microbiol. 2016 Oct 19. pii: JCM.01682.
    PubMed     Text format     Abstract available


  59. JAYAKUMAR A, Savic RM, Everett CK, Benator D, et al
    Xpert MTB/RIF Assay shows faster clearance of M. tuberculosis DNA with higher rifapentine exposure.
    J Clin Microbiol. 2016 Oct 12. pii: JCM.01313.
    PubMed     Text format     Abstract available


  60. HOFMANN-THIEL S, Molodtsov N, Antonenka U, Hoffmann H, et al
    Evaluation of the Abbott RealTime MTB and RealTime MTB INH/RIF assays for direct detection of Mycobacterium tuberculosis complex and resistance markers in respiratory and extra-pulmonary specimens.
    J Clin Microbiol. 2016 Oct 12. pii: JCM.01144.
    PubMed     Text format     Abstract available


    September 2016
  61. DIEN BARD J, Naccache SN, Bender JM
    Use of a Molecular Panel to Aid in the Diagnosis of Culture-Negative Meningitis.
    J Clin Microbiol. 2016 Sep 28. pii: JCM.01957.
    PubMed     Text format     Abstract available


  62. PEREZ-LAGO L, Martinez-Lirola M, Garcia S, Herranz M, et al
    Urgent implementation in a hospital setting of a strategy to rule out secondary cases caused by imported XDR tuberculosis at diagnosis.
    J Clin Microbiol. 2016 Sep 28. pii: JCM.01718.
    PubMed     Text format     Abstract available


  63. ROCHEFORT C, Behr MA
    New-Data Letter - << Assessment of microbiological diagnosis of active pulmonary tuberculosis: culture on liquid media with or without solid media >>.
    J Clin Microbiol. 2016 Sep 21. pii: JCM.01902.
    PubMed     Text format     Abstract available


  64. BONJEAN M, Hodille E, Dumitrescu O, Dupieux C, et al
    Disk diffusion testing for the detection of methicillin-resistant staphylococci: does moxalactam improve upon cefoxitin?
    J Clin Microbiol. 2016 Sep 14. pii: JCM.01195.
    PubMed     Text format     Abstract available


  65. SALEHI E, Hedayati MT, Zoll J, Rafati H, et al
    Discrimination of aspergillosis, mucormycosis, fusariosis and scedosporiosis in formalin-fixed paraffin-embedded tissue specimens using multiple real-time quantitative PCR assays.
    J Clin Microbiol. 2016 Sep 7. pii: JCM.01185.
    PubMed     Text format     Abstract available


  66. HOLTFRETER S, Grumann D, Balau V, Barwich A, et al
    Molecular epidemiology of Staphylococcus aureus in the general population in Northeast Germany - results of the Study of Health in Pomerania (SHIP-TREND-0).
    J Clin Microbiol. 2016 Sep 7. pii: JCM.00312.
    PubMed     Text format     Abstract available


  67. BLOMFELDT A, Aamot HV, Eskesen AN, Muller F, et al
    Correction for Blomfeldt et al., Molecular Characterization of Methicillin-Sensitive Staphylococcus aureus Isolates from Bacteremic Patients in a Norwegian University Hospital.
    J Clin Microbiol. 2016;54:2404.
    PubMed     Text format    


  68. AAMOT HV, Blomfeldt A, Eskesen AN
    Correction for Aamot et al., Genotyping of 353 Staphylococcus aureus Bloodstream Isolates Collected between 2004 and 2009 at a Norwegian University Hospital and Potential Associations with Clinical Parameters.
    J Clin Microbiol. 2016;54:2403.
    PubMed     Text format    


    August 2016
  69. MOROZUMI M, Wajima T, Takata M, Iwata S, et al
    Molecular characteristics of Group B streptococci isolated from adults with invasive infections in Japan.
    J Clin Microbiol. 2016 Aug 24. pii: JCM.01183.
    PubMed     Text format     Abstract available


  70. HAYDEN MK, Lolans K, Haffenreffer K, Avery TR, et al
    Chlorhexidine and Mupirocin Susceptibility of Methicillin-Resistant Staphylococcus aureus Isolates in the REDUCE-MRSA Trial.
    J Clin Microbiol. 2016 Aug 24. pii: JCM.01444.
    PubMed     Text format     Abstract available


  71. STEVENS DA, Zhang Y, Finkelman MA, Demosthenes P, et al
    CSF (1,3)-beta-D-glucan Testing Is Useful in Diagnosis of Coccidioidal Meningitis.
    J Clin Microbiol. 2016 Aug 24. pii: JCM.01224.
    PubMed     Text format     Abstract available


  72. HOU X, Xiao M, Chen SC, Wang H, et al
    Candida haemulonii species complex: identification and antifungal susceptibility profiles of clinical isolates from a multi-center study in China.
    J Clin Microbiol. 2016 Aug 17. pii: JCM.01492.
    PubMed     Text format     Abstract available


  73. SAID HM, Krishnamani K, Omar SV, Dreyer AW, et al
    Evaluation of semi-automated IS6110 based RFLP typing for M. tuberculosis in a high burden setting.
    J Clin Microbiol. 2016 Aug 3. pii: JCM.00408.
    PubMed     Text format     Abstract available


  74. POWERS-FLETCHER MV, Hanson KE
    Molecular Diagnostic Testing for Aspergillus.
    J Clin Microbiol. 2016 Aug 3. pii: JCM.00818.
    PubMed     Text format     Abstract available


  75. MOLINA-MOYA B, Kazdaglis G, Lacoma A, Prat C, et al
    Correction for Molina-Moya et al., Evaluation of GenoFlow DR-MTB Array Test for Detection of Rifampin and Isoniazid Resistance in Mycobacterium tuberculosis.
    J Clin Microbiol. 2016;54:2211.
    PubMed     Text format    


  76. GUINEA J, Sandoval-Denis M, Escribano P, Pelaez T, et al
    Correction for Guinea et al., Aspergillus citrinoterreus, a New Species of Section Terrei Isolated from Samples of Patients with Nonhematological Predisposing Conditions.
    J Clin Microbiol. 2016;54:2210.
    PubMed     Text format    


  77. ESCRIBANO P, Pelaez T, Bouza E, Guinea J, et al
    Correction for Escribano et al., Microsatellite (STRAf) Genotyping Cannot Differentiate between Invasive and Colonizing Aspergillus fumigatus Isolates.
    J Clin Microbiol. 2016;54:2209.
    PubMed     Text format    


  78. KIM SH, Lee NE, Lee JS, Shin JH, et al
    Correction for Kim et al., Identification of Mycobacterial Antigens in Human Urine by Use of Immunoglobulin G Isolated from Sera of Patients with Active Pulmonary Tuberculosis.
    J Clin Microbiol. 2016;54:2208.
    PubMed     Text format    


    July 2016
  79. PRITT BS, Patel R, Kirn TJ, Thomson RB Jr, et al
    Point-Counterpoint: A Nucleic acid amplification test for Streptococcus pyogenes should replace antigen detection and culture for the detection of bacterial pharyngitis.
    J Clin Microbiol. 2016 Jul 20. pii: JCM.01472.
    PubMed     Text format     Abstract available


  80. FARON ML, Buchan BW, Coon C, Liebregts T, et al
    Automatic Digital Analysis of Chromogenic Media for Vancomycin Resistant Enterococci Screens using the Copan WASPLab.
    J Clin Microbiol. 2016 Jul 13. pii: JCM.01040.
    PubMed     Text format     Abstract available


  81. IATTA R, Nuccio F, Immediato D, Mosca A, et al
    Species distribution and in vitro azole susceptibility of Aspergillus section Nigri from clinical and environmental settings.
    J Clin Microbiol. 2016 Jul 13. pii: JCM.01075.
    PubMed     Text format     Abstract available


  82. HANSON KE
    The first fully automated molecular diagnostic panel for meningitis and encephalitis: how well does it perform and when should it be used?
    J Clin Microbiol. 2016 Jul 13. pii: JCM.01255.
    PubMed     Text format     Abstract available


  83. MASIH A, Singh PK, Kathuria S, Agarwal K, et al
    Clinically Significant Rare Aspergillus Species in a Referral Chest Hospital, Delhi, India: Molecular and MALDI TOF Identification and their Antifungal Susceptibility Profiles.
    J Clin Microbiol. 2016 Jul 13. pii: JCM.00962.
    PubMed     Text format     Abstract available


  84. WESTBLADE LF, Burd EM
    Closing the Brief Case: Cryptococcus gattii Meningitis with Ventriculitis.
    J Clin Microbiol. 2016;54:1934.
    PubMed     Text format    


  85. SIX A, Firon A, Plainvert C, Caplain C, et al
    Correction for Six et al., Molecular Characterization of Nonhemolytic and Nonpigmented Group B Streptococci Responsible for Human Invasive Infections.
    J Clin Microbiol. 2016;54:1932.
    PubMed     Text format    


  86. CHEN X, Wang B, Yang W, Kong F, et al
    Correction for Chen et al., Rolling Circle Amplification for Direct Detection of rpoB Gene Mutations in Mycobacterium tuberculosis Isolates from Clinical Specimens.
    J Clin Microbiol. 2016;54:1931.
    PubMed     Text format    


  87. DE HEER K, Kok MG, Fens N, Weersink EJ, et al
    Correction for de Heer et al., Detection of Airway Colonization by Aspergillus fumigatus by Use of Electronic Nose Technology in Patients with Cystic Fibrosis.
    J Clin Microbiol. 2016;54:1926.
    PubMed     Text format    


  88. WESTBLADE LF, Burd EM
    The Brief Case: Cryptococcus gattii Meningitis with Ventriculitis.
    J Clin Microbiol. 2016;54:1676-8.
    PubMed     Text format    


    June 2016
  89. DALPKE AH, Hofko M, Zimmermann S
    Development of a real-time PCR protocol requiring minimal handling for detection of vancomycin-resistant enterococci (VRE) with the fully automated BD MAX system.
    J Clin Microbiol. 2016 Jun 29. pii: JCM.00768.
    PubMed     Text format     Abstract available


  90. UPHOFF TS, Buchan BW, Ledeboer NA, Granato PA, et al
    Multicenter Evaluation of the Solana(R) Group A Streptococcus Assay: Comparison with Culture.
    J Clin Microbiol. 2016 Jun 29. pii: JCM.01268.
    PubMed     Text format     Abstract available


  91. SINGHAL R, Reynolds PR, Marola J, Epperson LE, et al
    Sequence analysis of fluoroquinolone resistance associated genes gyrA and gyrB in clinical Mycobacterium tuberculosis isolates from suspected multidrug-resistant tuberculosis patients in New Delhi, India.
    J Clin Microbiol. 2016 Jun 22. pii: JCM.00670.
    PubMed     Text format     Abstract available


  92. ZENG X, Li H, Zheng R, Kurepina N, et al
    Spoligotyping of Mycobacterium Tuberculosis Complex Isolates Using Ligation-based Amplification and Melting Curve Analysis.
    J Clin Microbiol. 2016 Jun 22. pii: JCM.00857.
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  93. LEBER AL, Everhart K, Balada-Llasat JM, Cullison J, et al
    Multicenter Evaluation of the BioFire FilmArray Meningitis Encephalitis Panel for the Detection of Bacteria, Viruses and Yeast in Cerebrospinal Fluid Specimens.
    J Clin Microbiol. 2016 Jun 22. pii: JCM.00730.
    PubMed     Text format     Abstract available


  94. ZANETTI S, Bua A, Molicotti P, Maiore I, et al
    Quantiferon plasma levels in presumed tuberculosis-related uveitis.
    J Clin Microbiol. 2016 Jun 1. pii: JCM.00848.
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  95. TANMOY AM, Saha S, Darmstadt GL, Whitney CG, et al
    PCR serotyping of Streptococcus pneumoniae from culture-negative specimens: Novel primers to detect serotypes within serogroup-18.
    J Clin Microbiol. 2016 Jun 1. pii: JCM.00419.
    PubMed     Text format     Abstract available


  96. CHENG JW, Yu SY, Xiao M, Wang H, et al
    Identification and antifungal susceptibility profile of Candida guilliermondii and Candida fermentati from a multi-center study in China.
    J Clin Microbiol. 2016 Jun 1. pii: JCM.00938.
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  97. SLEIMAN S, Halliday CL, Chapman B, Brown M, et al
    Performance of matrix-assisted laser desorption ionization-time of flight mass spectrometry for the identification of Aspergillus, Scedosporium, and Fusarium spp. in the Australian clinical setting.
    J Clin Microbiol. 2016 Jun 1. pii: JCM.00906.
    PubMed     Text format     Abstract available


    May 2016
  98. COLMAN RE, Anderson J, Lemmer D, Lehmkuhl E, et al
    Rapid Drug Susceptibility Testing of Drug Resistant Mycobacterium tuberculosis Directly from Clinical Samples using Amplicon Sequencing: A Proof of Concept Study.
    J Clin Microbiol. 2016 May 25. pii: JCM.00535.
    PubMed     Text format     Abstract available


  99. YEH CF, Chang SC, Cheng CW, Lin JF, et al
    Clinical features, outcome and molecular characteristics of community- and healthcare-associated Staphylococcus lugdunensis infections.
    J Clin Microbiol. 2016 May 25. pii: JCM.00847.
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  100. ADKINS PR, Middleton JR, Fox LK
    Comparison of Virulence Gene Identification, Ribosomal Spacer PCR, and Pulsed Field Gel Electrophoresis for Strain-Typing Staphylococcus aureus Isolated from Cases of Subclinical Bovine Mastitis in the USA.
    J Clin Microbiol. 2016 May 18. pii: JCM.03282.
    PubMed     Text format     Abstract available


  101. HAGEMANN JB, Simnacher U, Longbottom D, Livingstone M, et al
    Analysis of the Humoral Immune Response against Surface and Virulence-Associated Chlamydia abortus Proteins in Ovine and Human Abortion Using a Newly Developed Line Immunoassay.
    J Clin Microbiol. 2016 May 18. pii: JCM.00351.
    PubMed     Text format     Abstract available


  102. STUCKI D, Ballif M, Egger M, Furrer H, et al
    Standard genotyping overestimates transmission of Mycobacterium tuberculosis among immigrants in a low incidence country.
    J Clin Microbiol. 2016 May 18. pii: JCM.00126.
    PubMed     Text format     Abstract available


  103. LAGI F, Bartalesi F, Pecile P, Biagioli T, et al
    A proposal for a new score-based approach to improve the efficiency of diagnostic laboratory workflow for acute bacterial meningitis in adults.
    J Clin Microbiol. 2016 May 11. pii: JCM.00149.
    PubMed     Text format     Abstract available


  104. WIDERSTROM M
    Significance of Staphylococcus epidermidis in Healthcare-Associated Infections, from Contaminant to Clinically Relevant Pathogen-This Is a Wake-up Call!
    J Clin Microbiol. 2016 May 11. pii: JCM.00743.
    PubMed     Text format     Abstract available


    April 2016
  105. QIAN Q, Urman G, Cederroth T, Najarian R, et al
    Photo Quiz: A Man with Fever and Cough.
    J Clin Microbiol. 2016;54:825.
    PubMed     Text format    


    March 2016
  106. MCELVANIA TEKIPPE E
    The Brief Case: Kingella kingae Septic Arthritis in a 14-Month-Old Child.
    J Clin Microbiol. 2016;54:513-5.
    PubMed     Text format    


  107. MOREL F, Abdennour L, Belaid H, Renvoise A, et al
    Photo Quiz: A "Non-Gramable" Strain Isolated from a Cerebrospinal Fluid Sample.
    J Clin Microbiol. 2016;54:511.
    PubMed     Text format    


    February 2016
  108. CHONG GM, Maertens JA, Lagrou K, Driessen GJ, et al
    Diagnostic Performance of Galactomannan Antigen Testing in Cerebrospinal Fluid.
    J Clin Microbiol. 2016;54:428-31.
    PubMed     Text format     Abstract available


  109. POIREL L, Fernandez J, Nordmann P
    Comparison of Three Biochemical Tests for Rapid Detection of Extended-Spectrum-beta-Lactamase-Producing Enterobacteriaceae.
    J Clin Microbiol. 2016;54:423-7.
    PubMed     Text format     Abstract available


  110. MUNSON KL, Napierala M, Munson E
    Suboptimal Trichomonas vaginalis Antigen Test Performance in a Low-Prevalence Sexually Transmitted Infection Community.
    J Clin Microbiol. 2016;54:500-1.
    PubMed     Text format    


  111. MUNSON E
    Biographical Feature: Clyde Thornsberry, Ph.D.
    J Clin Microbiol. 2016;54:250-3.
    PubMed     Text format    


  112. ARAUJO R, Caramalho R, Coutinho C, Sa-Correia I, et al
    SNaPBceBcon: a Practical Tool for Identification and Genotyping of Burkholderia cepacia and Burkholderia contaminans.
    J Clin Microbiol. 2016;54:483-8.
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  113. MUNSON E, Bykowski H, Munson KL, Napierala M, et al
    Clinical Laboratory Assessment of Mycoplasma genitalium Transcription-Mediated Amplification Using Primary Female Urogenital Specimens.
    J Clin Microbiol. 2016;54:432-8.
    PubMed     Text format     Abstract available


  114. WORKENTINE M, Poonja A, Waddell B, Duong J, et al
    Development and Validation of a PCR Assay To Detect the Prairie Epidemic Strain of Pseudomonas aeruginosa from Patients with Cystic Fibrosis.
    J Clin Microbiol. 2016;54:489-91.
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  115. POLLOCK NR
    Ultrasensitive Detection and Quantification of Toxins for Optimized Diagnosis of Clostridium difficile Infection.
    J Clin Microbiol. 2016;54:259-64.
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  116. THOMAZ DY, Grenfell RC, Vidal MS, Giudice MC, et al
    Does the Capsule Interfere with Performance of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Cryptococcus neoformans and Cryptococcus gattii?
    J Clin Microbiol. 2016;54:474-7.
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  117. AVNI T, Bieber A, Green H, Steinmetz T, et al
    Diagnostic Accuracy of PCR Alone and Compared to Urinary Antigen Testing for Detection of Legionella spp.: a Systematic Review.
    J Clin Microbiol. 2016;54:401-11.
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  118. BEMER P, Leger J, Tande D, Plouzeau C, et al
    How Many Samples and How Many Culture Media To Diagnose a Prosthetic Joint Infection: a Clinical and Microbiological Prospective Multicenter Study.
    J Clin Microbiol. 2016;54:385-91.
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  119. BOGAERTS P, Yunus S, Massart M, Huang TD, et al
    Evaluation of the BYG Carba Test, a New Electrochemical Assay for Rapid Laboratory Detection of Carbapenemase-Producing Enterobacteriaceae.
    J Clin Microbiol. 2016;54:349-58.
    PubMed     Text format     Abstract available


    January 2016
  120. SUWANTARAT N, Romagnoli M, Carroll KC
    Photo Quiz: Isolation of an Unusual Gram-Positive Coccus from a Positive Blood Culture in a Patient with Pneumonia. Actinomyces radicidentis Bacteremia.
    J Clin Microbiol. 2016;54:1.
    PubMed     Text format    


  121. PARK BG, Yoon JG, Rim JH, Lee A, et al
    Comparison of Six Automated Treponema-Specific Antibody Assays.
    J Clin Microbiol. 2016;54:163-7.
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  122. XIAO M, Fan X, Chen XX, Wang H, et al
    Misidentification of a Rare Species, Cryptococcus laurentii, by Commonly Used Commercial Biochemical Methods and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Systems: Challenges for Clinical Mycology Laboratories.
    J Clin Microbiol. 2016;54:226-9.
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  123. CZURDA S, Smelik S, Preuner-Stix S, Nogueira F, et al
    Occurrence of Fungal DNA Contamination in PCR Reagents: Approaches to Control and Decontamination.
    J Clin Microbiol. 2016;54:148-52.
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  124. AGERGAARD CN, Hoegh SV, Holt HM, Justesen US, et al
    Two Serious Cases of Infection with Clostridium celatum after 40 Years in Hiding?
    J Clin Microbiol. 2016;54:236-8.
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  125. MELENDEZ DP, Greenwood-Quaintance KE, Berbari EF, Osmon DR, et al
    Evaluation of a Genus- and Group-Specific Rapid PCR Assay Panel on Synovial Fluid for Diagnosis of Prosthetic Knee Infection.
    J Clin Microbiol. 2016;54:120-6.
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  126. KOCIOLEK LK, Gerding DN
    Clinical Utility of Laboratory Detection of Clostridium difficile Strain BI/NAP1/027.
    J Clin Microbiol. 2016;54:19-24.
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  127. GASEM MH, Farida H, Ahmed A, Severin JA, et al
    Are Pathogenic Leptospira Species Agents of Community-Acquired Pneumonia? Case Reports of Leptospirosis Presenting as Pneumonia.
    J Clin Microbiol. 2016;54:197-9.
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  128. MOORE MS, McCarroll MG, McCann CD, May L, et al
    Direct Screening of Blood by PCR and Pyrosequencing for a 16S rRNA Gene Target from Emergency Department and Intensive Care Unit Patients Being Evaluated for Bloodstream Infection.
    J Clin Microbiol. 2016;54:99-105.
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  129. ALEXANDER DC, Fitzgerald SF, DePaulo R, Kitzul R, et al
    Laboratory-Acquired Infection with Salmonella enterica Serovar Typhimurium Exposed by Whole-Genome Sequencing.
    J Clin Microbiol. 2016;54:190-3.
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  130. EDOUARD S, Courtois GD, Gautret P, Jouve JL, et al
    High Prevalence of Mycoplasma faucium DNA in the Human Oropharynx.
    J Clin Microbiol. 2016;54:194-6.
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    December 2015
  131. HUMPHRIES RM, Dien Bard J
    Point-Counterpoint: Reflex cultures reduce laboratory workload and improve antimicrobial stewardship in patients suspected of having urinary tract infections.
    J Clin Microbiol. 2015 Dec 9. pii: JCM.03021.
    PubMed     Text format     Abstract available


    November 2015
  132. DOUTHWAITE ST, Walker C, Adams EJ, Mak C, et al
    Performance of a novel point-of-care molecular assay for the detection of Influenza A, B and Respiratory Syncytial Virus (Enigma(R) MiniLab) in children with acute respiratory infection.
    J Clin Microbiol. 2015 Nov 11. pii: JCM.02887.
    PubMed     Text format     Abstract available


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