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Breast Cancer

Free Subscription Articles published in PLoS Comput Biol Retrieve available abstracts of 17 articles: HTML format

Single Articles

December 2025
1. HAN C, Song Z, Xu Z, Chen J, et al
   MAGNET: Multi-view graph autoencoder with cell-gene attention for cell interaction network reconstruction from spatial transcriptomics.
   PLoS Comput Biol. 2025;21:e1013810.
   PubMed     Abstract available
   
   
   November 2025
2. FAHMI NA, Cheng S, Overstreet J, Song Q, et al
   IPScan: Detecting novel intronic PolyAdenylation events with RNA-seq data.
   PLoS Comput Biol. 2025;21:e1013668.
   PubMed     Abstract available
   
   
   October 2025
3. MATACHE A, Lima-Junior JR, Kuznetsov M, Urbaniak K, et al
   Ligand discrimination in immune cells: Signal processing insights into immune dysfunction in ER+ breast cancer.
   PLoS Comput Biol. 2025;21:e1013615.
   PubMed     Abstract available
   
   
   September 2025
4. NOUIRA A, Azencott CA
   Sparse multitask group Lasso for genome-wide association studies.
   PLoS Comput Biol. 2025;21:e1012734.
   PubMed     Abstract available
   
   
   August 2025
5. YAVUZ BR, Sahin U, Jang H, Nussinov R, et al
   Mutations in tumor signaling, metastases, and synthetic lethality establish distinct patterns.
   PLoS Comput Biol. 2025;21:e1013351.
   PubMed     Abstract available
   
   
   May 2025
6. HOPFL S, Ozverin M, Nowack H, Tamas R, et al
   Integrated mathematical and experimental modeling uncovers enhanced EMT plasticity upon loss of the DLC1 tumor suppressor.
   PLoS Comput Biol. 2025;21:e1013076.
   PubMed     Abstract available
   
   
   April 2025
7. NOURBAKHSH M, Zheng Y, Noor H, Chen H, et al
   Revealing cancer driver genes through integrative transcriptomic and epigenomic analyses with Moonlight.
   PLoS Comput Biol. 2025;21:e1012999.
   PubMed     Abstract available
   
   
   February 2025
8. SAKAI SA, Nomura R, Nagasawa S, Chi S, et al
   SpatialKNifeY (SKNY): Extending from spatial domain to surrounding area to identify microenvironment features with single-cell spatial omics data.
   PLoS Comput Biol. 2025;21:e1012854.
   PubMed     Abstract available
   
   
   
9. ZHAN X, Xu Q, Zheng Y, Lu G, et al
   Reliability-enhanced data cleaning in biomedical machine learning using inductive conformal prediction.
   PLoS Comput Biol. 2025;21:e1012803.
   PubMed     Abstract available
   
   
   January 2025
10. SHI X, Wang X, Jin L, Halakivi-Clarke L, et al
    Bayesian identification of differentially expressed isoforms using a novel joint model of RNA-seq data.
    PLoS Comput Biol. 2025;21:e1012750.
    PubMed     Abstract available
    
    
    November 2024
11. HUANG HY, Zhang FW, Yu J, Xiao YH, et al
    A computational analysis of the oncogenic and anti-tumor immunity role of P4HA3 in human cancers.
    PLoS Comput Biol. 2024;20:e1012284.
    PubMed     Abstract available
    
    
    October 2024
12. CHEN L, Huang ZH, Sun Y, Domaratzki M, et al
    Conditional probabilistic diffusion model driven synthetic radiogenomic applications in breast cancer.
    PLoS Comput Biol. 2024;20:e1012490.
    PubMed     Abstract available
    
    
    June 2024
13. XIE X, Sinha S
    Quantitative estimates of the regulatory influence of long non-coding RNAs on global gene expression variation using TCGA breast cancer transcriptomic data.
    PLoS Comput Biol. 2024;20:e1012103.
    PubMed     Abstract available
    
    
    
14. VANDERDOES J, Marceaux C, Yokote K, Asselin-Labat ML, et al
    Using random forests to uncover the predictive power of distance-varying cell interactions in tumor microenvironments.
    PLoS Comput Biol. 2024;20:e1011361.
    PubMed     Abstract available
    
    
    
15. DIMITRIOU NM, Flores-Torres S, Kyriakidou M, Kinsella JM, et al
    Cancer cell sedimentation in 3D cultures reveals active migration regulated by self-generated gradients and adhesion sites.
    PLoS Comput Biol. 2024;20:e1012112.
    PubMed     Abstract available
    
    
    
16. PERRONE MC, Lerner MG, Dunworth M, Ewald AJ, et al
    Prioritizing drug targets by perturbing biological network response functions.
    PLoS Comput Biol. 2024;20:e1012195.
    PubMed     Abstract available
    
    
    May 2024
17. BENZEKRY S, Mastri M, Nicolo C, Ebos JML, et al
    Machine-learning and mechanistic modeling of metastatic breast cancer after neoadjuvant treatment.
    PLoS Comput Biol. 2024;20:e1012088.
    PubMed     Abstract available
    
    

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