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Breast Cancer

Free Subscription Articles published in PLoS Comput Biol Retrieve available abstracts of 19 articles: HTML format Text format

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April 2019
1. VARENNES J, Moon HR, Saha S, Mugler A, et al
   Physical constraints on accuracy and persistence during breast cancer cell chemotaxis.
   PLoS Comput Biol. 2019;15:e1006961.
   PubMed     Text format     Abstract available
   
   
   March 2019
2. CHAPMAN MP, Risom T, Aswani AJ, Langer EM, et al
   Modeling differentiation-state transitions linked to therapeutic escape in triple-negative breast cancer.
   PLoS Comput Biol. 2019;15:e1006840.
   PubMed     Text format     Abstract available
   
   
   
3. DE ALMEIDA BP, Vieira AF, Paredes J, Bettencourt-Dias M, et al
   Pan-cancer association of a centrosome amplification gene expression signature with genomic alterations and clinical outcome.
   PLoS Comput Biol. 2019;15:e1006832.
   PubMed     Text format     Abstract available
   
   
   February 2019
4. RUFFALO M, Thomas R, Chen J, Lee AV, et al
   Network-guided prediction of aromatase inhibitor response in breast cancer.
   PLoS Comput Biol. 2019;15:e1006730.
   PubMed     Text format     Abstract available
   
   
   
5. ALLAHYAR A, Ubels J, de Ridder J
   A data-driven interactome of synergistic genes improves network-based cancer outcome prediction.
   PLoS Comput Biol. 2019;15:e1006657.
   PubMed     Text format     Abstract available
   
   
   
6. DAMIANI C, Maspero D, Di Filippo M, Colombo R, et al
   Integration of single-cell RNA-seq data into population models to characterize cancer metabolism.
   PLoS Comput Biol. 2019;15:e1006733.
   PubMed     Text format     Abstract available
   
   
   October 2018
7. BISMEIJER T, Canisius S, Wessels LFA
   Molecular characterization of breast and lung tumors by integration of multiple data types with functional sparse-factor analysis.
   PLoS Comput Biol. 2018;14:e1006520.
   PubMed     Text format     Abstract available
   
   
   September 2018
8. LYU Y, Xue L, Zhang F, Koch H, et al
   Condition-adaptive fused graphical lasso (CFGL): An adaptive procedure for inferring condition-specific gene co-expression network.
   PLoS Comput Biol. 2018;14:e1006436.
   PubMed     Text format     Abstract available
   
   
   June 2018
9. SHIN SY, Muller AK, Verma N, Lev S, et al
   Systems modelling of the EGFR-PYK2-c-Met interaction network predicts and prioritizes synergistic drug combinations for triple-negative breast cancer.
   PLoS Comput Biol. 2018;14:e1006192.
   PubMed     Text format     Abstract available
   
   
   May 2018
10. RANGAN AV, McGrouther CC, Kelsoe J, Schork N, et al
    A loop-counting method for covariate-corrected low-rank biclustering of gene-expression and genome-wide association study data.
    PLoS Comput Biol. 2018;14:e1006105.
    PubMed     Text format     Abstract available
    
    
    February 2018
11. GHAFFARIZADEH A, Heiland R, Friedman SH, Mumenthaler SM, et al
    PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems.
    PLoS Comput Biol. 2018;14:e1005991.
    PubMed     Text format     Abstract available
    
    
    
12. SHIMONI Y
    Association between expression of random gene sets and survival is evident in multiple cancer types and may be explained by sub-classification.
    PLoS Comput Biol. 2018;14:e1006026.
    PubMed     Text format     Abstract available
    
    
    
13. SUN JX, He Y, Sanford E, Montesion M, et al
    A computational approach to distinguish somatic vs. germline origin of genomic alterations from deep sequencing of cancer specimens without a matched normal.
    PLoS Comput Biol. 2018;14:e1005965.
    PubMed     Text format     Abstract available
    
    
    January 2018
14. ENGEL M, Longden J, Ferkinghoff-Borg J, Robin X, et al
    Bowhead: Bayesian modelling of cell velocity during concerted cell migration.
    PLoS Comput Biol. 2018;14:e1005900.
    PubMed     Text format     Abstract available
    
    
    November 2017
15. PATKAR S, Magen A, Sharan R, Hannenhalli S, et al
    A network diffusion approach to inferring sample-specific function reveals functional changes associated with breast cancer.
    PLoS Comput Biol. 2017;13:e1005793.
    PubMed     Text format     Abstract available
    
    
    October 2017
16. GABASOVA E, Reid J, Wernisch L
    Clusternomics: Integrative context-dependent clustering for heterogeneous datasets.
    PLoS Comput Biol. 2017;13:e1005781.
    PubMed     Text format     Abstract available
    
    
    
17. ROMAN T, Xie L, Schwartz R
    Automated deconvolution of structured mixtures from heterogeneous tumor genomic data.
    PLoS Comput Biol. 2017;13:e1005815.
    PubMed     Text format     Abstract available
    
    
    September 2017
18. DUMEAUX V, Fjukstad B, Fjosne HE, Frantzen JO, et al
    Interactions between the tumor and the blood systemic response of breast cancer patients.
    PLoS Comput Biol. 2017;13:e1005680.
    PubMed     Text format     Abstract available
    
    
    
19. SOLER-OLIVA ME, Guerrero-Martinez JA, Bachetti V, Reyes JC, et al
    Analysis of the relationship between coexpression domains and chromatin 3D organization.
    PLoS Comput Biol. 2017;13:e1005708.
    PubMed     Text format     Abstract available
    
    

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