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COVID-19: Daily Top 10 Papers

  Drug Resistance

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2 Antimicrob Agents Chemother
14 Clin Infect Dis
3 J Antimicrob Chemother
1 J Bacteriol
1 J Clin Microbiol
1 PLoS One
1 Proc Natl Acad Sci U S A

  Retrieve available abstracts of this week’s articles:
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Single Articles

    Antimicrob Agents Chemother

  1. LEY SD, Pillay S, Streicher EM, van der Heijden YF, et al
    Melting the Eis: non-detection of kanamycin resistance markers by routine diagnostic tests and identification of new eis-promoter variants.
    Antimicrob Agents Chemother. 2021 Apr 26. pii: AAC.02502.
    PubMed         Abstract available

  2. KIM DH, Kim SY, Koh WJ, Jhun BW, et al
    In Vitro Activity of Oxazolidinone against Nontuberculous Mycobacteria, Including Macrolide-Resistant Clinical Isolates.
    Antimicrob Agents Chemother. 2021 Apr 26. pii: AAC.02306.
    PubMed         Abstract available

    Clin Infect Dis

  3. POTTS CC, Retchless AC, McNamara LA, Marasini D, et al
    Acquisition of ciprofloxacin resistance among an expanding clade of beta-lactamase positive, serogroup Y Neisseria meningitidis in the United States.
    Clin Infect Dis. 2021 Apr 26. pii: 6253703. doi: 10.1093.
    PubMed         Abstract available

  4. SHAH M, Paradis S, Betz J, Beylis N, et al
    Multicenter Study of the Accuracy of the BD MAX MDR-TB Assay for Detection of Mycobacterium tuberculosis Complex and Mutations Associated with Resistance to Rifampin and Isoniazid.
    Clin Infect Dis. 2019 Sep 27. pii: 5574845. doi: 10.1093.
    PubMed         Abstract available

  5. WALLIS CL, Hughes MD, Ritz J, Viana R, et al
    Diverse HIV-1 Drug Resistance Profiles at Screening for ACTG A5288: A Study of People Experiencing Virologic Failure on Second-line ART in Resource Limited Settings.
    Clin Infect Dis. 2019 Nov 14. pii: 5625392. doi: 10.1093/cid/ciz1116.
    PubMed         Abstract available

  6. POPPING S, Verwijs R, Cuypers L, Claassen M, et al
    Transmission of NS5A resistance associated substitutions among men-who-have-sex-with-men recently infected with hepatitis C virus genotype 1a.
    Clin Infect Dis. 2020 Feb 14. pii: 5735665. doi: 10.1093.
    PubMed         Abstract available

  7. MCGEE L, Chochua S, Li Z, Mathis S, et al
    Multistate, population-based distributions of candidate vaccine targets, clonal complexes, and resistance features of invasive Group B Streptococci within the US: 2015-2017.
    Clin Infect Dis. 2020 Feb 15. pii: 5736375. doi: 10.1093.
    PubMed         Abstract available

  8. STRICH JR, Ricotta E, Warner S, Lai YL, et al
    Pharmacoepidemiology of Ceftazidime-Avibactam Use: A Retrospective Cohort Analysis of 210 US Hospitals.
    Clin Infect Dis. 2021;72:611-621.
    PubMed         Abstract available

  9. GORWOOD J, Bourgeois C, Pourcher V, Pourcher G, et al
    The integrase inhibitors dolutegravir and raltegravir exert pro-adipogenic and profibrotic effects and induce insulin resistance in human/simian adipose tissue and human adipocytes.
    Clin Infect Dis. 2020 Mar 13. pii: 5804258. doi: 10.1093.
    PubMed         Abstract available

  10. DE MAN TJB, Yaffee AQ, Zhu W, Batra D, et al
    Multispecies Outbreak of Verona Integron-Encoded Metallo-ss-Lactamase-Producing Multidrug Resistant Bacteria Driven by a Promiscuous Incompatibility Group A/C2 Plasmid.
    Clin Infect Dis. 2021;72:414-420.
    PubMed         Abstract available

  11. HARRIS PNA, Alexander M W
    Beyond the Core Genome: Tracking Plasmids in Outbreaks of Multidrug-resistant Bacteria.
    Clin Infect Dis. 2021;72:421-422.

  12. DOOKIE N, Padayatchi N, Lessells RJ, Naicker CL, et al
    Individualised treatment of Multi-Drug Resistant Tuberculosis using Whole Genome Sequencing and Expanded Drug Susceptibility Testing.
    Clin Infect Dis. 2020 May 8. pii: 5834727. doi: 10.1093.
    PubMed         Abstract available

  13. SULTAN AS, Vila T, Montelongo-Jauregui D, Jabra-Rizk MA, et al
    The Global Emergence of the Fungal Pathogen Candida auris.
    Clin Infect Dis. 2020 May 18. pii: 5838782. doi: 10.1093.

  14. NELSON RE, Hatfield KM, Wolford H, Samore MH, et al
    National Estimates of Healthcare Costs Associated With Multidrug-Resistant Bacterial Infections Among Hospitalized Patients in the United States.
    Clin Infect Dis. 2021;72.
    PubMed         Abstract available

  15. TANNER WD, Leecaster MK, Zhang Y, Stratford KM, et al
    Environmental Contamination of Contact Precaution and Non-Contact Precaution Patient Rooms in Six Acute Care Facilities.
    Clin Infect Dis. 2021;72.
    PubMed         Abstract available

  16. CAREY ME, Jain R, Yousuf M, Maes M, et al
    Spontaneous Emergence of Azithromycin Resistance in Independent Lineages of Salmonella Typhi in Northern India.
    Clin Infect Dis. 2021;72:e120-e127.
    PubMed         Abstract available

    J Antimicrob Chemother

  17. RAOULT D, Hadjadj L, Baron SA, Rolain JM, et al
    Role of glyphosate in the emergence of antimicrobial resistance in bacteria?
    J Antimicrob Chemother. 2021 Apr 24. pii: 6248211. doi: 10.1093.
    PubMed         Abstract available

  18. TRUSWELL A, Abraham R, O'Dea M, Lee ZZ, et al
    Robotic Antimicrobial Susceptibility Platform (RASP): a next-generation approach to One Health surveillance of antimicrobial resistance.
    J Antimicrob Chemother. 2021 Apr 24. pii: 6248215. doi: 10.1093.
    PubMed         Abstract available

  19. PUTSATHIT P, Hong S, George N, Hemphill C, et al
    Antimicrobial resistance surveillance of Clostridioides difficile in Australia, 2015-18.
    J Antimicrob Chemother. 2021 Apr 25. pii: 6250920. doi: 10.1093.
    PubMed         Abstract available

    J Bacteriol

  20. MARISCOTTI JF, Garcia Vescovi E
    Serratia marcescens RamA expression is under PhoP-dependent control and modulates lipid A-related genes transcription and antibiotic resistance phenotypes.
    J Bacteriol. 2021 Apr 29. pii: JB.00523-20. doi: 10.1128/JB.00523.
    PubMed         Abstract available

    J Clin Microbiol

  21. KAKIUCHI T, Miyata I, Kimura R, Shimomura G, et al
    Clinical evaluation of a novel point-of-care assay to detect Mycoplasma pneumoniae and associated macrolide resistant mutations.
    J Clin Microbiol. 2021 Apr 28. pii: JCM.03245-20. doi: 10.1128/JCM.03245.
    PubMed         Abstract available

    PLoS One

  22. GUEVARRA RB, Magez S, Peeters E, Chung MS, et al
    Comprehensive genomic analysis reveals virulence factors and antibiotic resistance genes in Pantoea agglomerans KM1, a potential opportunistic pathogen.
    PLoS One. 2021;16:e0239792.
    PubMed         Abstract available

    Proc Natl Acad Sci U S A

  23. GIRGIS HS, DuPai CD, Lund J, Reeder J, et al
    Single-molecule nanopore sequencing reveals extreme target copy number heterogeneity in arylomycin-resistant mutants.
    Proc Natl Acad Sci U S A. 2021;118.
    PubMed         Abstract available

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