Home The Word Brain My Amedeo FAQ Privacy About Flying Publisher   


The Angels Initiative

Stroke prevention


  Drug Resistance

  Free Subscription


Articles published in J Clin Microbiol

Retrieve available abstracts of 47 articles:
HTML format



Single Articles


    November 2022
  1. ABE R, Akeda Y, Sakamoto N, Takeuchi D, et al
    A Nationwide Plasmidome Surveillance in Thailand Reveals a Limited Variety of New Delhi Metallo-beta-Lactamase-Producing Carbapenem-Resistant Enterobacteriaceae Clones and Spreading Plasmids.
    J Clin Microbiol. 2022 Nov 29:e0108022. doi: 10.1128/jcm.01080.
    PubMed     Abstract available


  2. ZHANG P, Wang Q, Zhou C, Zhang F, et al
    A Pooling Strategy for Detecting Carbapenem Resistance Genes by the Xpert Carba-R Test in Rectal Swab Specimens.
    J Clin Microbiol. 2022 Nov 14:e0118122. doi: 10.1128/jcm.01181.
    PubMed     Abstract available


  3. GARDETTE M, Henin N, Le Roy C, Guiraud J, et al
    Clinical Performance of Three Commercial Molecular Diagnostic Assays for the Detection of Fluoroquinolone Resistance-Associated Mutations in Mycoplasma genitalium.
    J Clin Microbiol. 2022 Nov 2:e0113522. doi: 10.1128/jcm.01135.
    PubMed     Abstract available


    July 2022
  4. NGANGUE YR, Mbuli C, Neh A, Nshom E, et al
    Diagnostic Accuracy of the Truenat MTB Plus Assay and Comparison with the Xpert MTB/RIF Assay to Detect Tuberculosis among Hospital Outpatients in Cameroon.
    J Clin Microbiol. 2022 Jul 21:e0015522. doi: 10.1128/jcm.00155.
    PubMed     Abstract available


  5. PYNE MT, Simmon KE, Mallory MA, Hymas WC, et al
    HIV-1 Drug Resistance Assay Using Ion Torrent Next Generation Sequencing and On-Instrument End-to-End Analysis Software.
    J Clin Microbiol. 2022;60:e0025322.
    PubMed     Abstract available


    June 2022
  6. RUZIN A, Barraud O, Yu L, Francois B, et al
    Performance of the Cepheid Methicillin-Resistant Staphylococcus aureus/S. aureus Skin and Soft Tissue Infection PCR Assay on Respiratory Samples from Mechanically Ventilated Patients for S. aureus Screening during the Phase 2 Double-Blind SAATELLITE S
    J Clin Microbiol. 2022 Jun 27:e0034722. doi: 10.1128/jcm.00347.
    PubMed     Abstract available


  7. JEAN S, Wallace MJ, Dantas G, Burnham CD, et al
    Time for Some Group Therapy: Update on Identification, Antimicrobial Resistance, Taxonomy, and Clinical Significance of the Bacteroides fragilis Group.
    J Clin Microbiol. 2022 Jun 14:e0236120. doi: 10.1128/jcm.02361.
    PubMed     Abstract available


  8. KUBIAK JM, Hovan M, Davidson E, Douglass C, et al
    Comparison between Perianal Swab and Stool Specimens for Detecting Colonization with Extended-Spectrum Beta-Lactamase-Producing and Fluoroquinolone-Resistant Enterobacterales.
    J Clin Microbiol. 2022 Jun 13:e0023422. doi: 10.1128/jcm.00234.
    PubMed     Abstract available


    May 2022
  9. TIBBETTS R, George S, Burwell R, Rajeev L, et al
    Performance of the Reveal Rapid Antibiotic Susceptibility Testing System on Gram-Negative Blood Cultures at a Large Urban Hospital.
    J Clin Microbiol. 2022 May 24:e0009822. doi: 10.1128/jcm.00098.
    PubMed     Abstract available


    April 2022
  10. SHALLOM SJ, Zelazny AM
    Detection of Mixed Populations of Clarithromycin-Susceptible and -Resistant Mycobacterium abscessus Strains.
    J Clin Microbiol. 2022;60:e0169421.
    PubMed     Abstract available


  11. CARVALHAES CG, Klauer AL, Rhomberg PR, Pfaller MA, et al
    Evaluation of Rezafungin Provisional CLSI Clinical Breakpoints and Epidemiological Cutoff Values Tested against a Worldwide Collection of Contemporaneous Invasive Fungal Isolates (2019 to 2020).
    J Clin Microbiol. 2022;60:e0244921.
    PubMed     Abstract available


  12. BADALI H, Canete-Gibas C, McCarthy D, Patterson H, et al
    Species Distribution and Antifungal Susceptibilities of Aspergillus Section Fumigati Isolates in Clinical Samples from the United States.
    J Clin Microbiol. 2022 Apr 11:e0028022. doi: 10.1128/jcm.00280.
    PubMed     Abstract available


    March 2022
  13. STREET TL, Sanderson ND, Kolenda C, Kavanagh J, et al
    Clinical Metagenomic Sequencing for Species Identification and Antimicrobial Resistance Prediction in Orthopedic Device Infection.
    J Clin Microbiol. 2022 Mar 31:e0215621. doi: 10.1128/jcm.02156.
    PubMed     Abstract available


    February 2022
  14. ARMSTRONG DT, Fisher S, Totten M, Schwartz M, et al
    Clinical Validation of the Xpert MTB/RIF Test for Identification of the Mycobacterium tuberculosis Complex in Acid-Fast Bacillus Smear-Positive MGIT Broth Cultures.
    J Clin Microbiol. 2022;60:e0216421.
    PubMed     Abstract available


  15. VILORIA WINNETT A, Srinivasan V, Davis M, Vijayan T, et al
    The Path of More Resistance: a Comparison of National Healthcare Safety Network and Clinical Laboratory Standards Institute Criteria in Developing Cumulative Antimicrobial Susceptibility Test Reports and Institutional Antibiograms.
    J Clin Microbiol. 2022;60:e0136621.
    PubMed     Abstract available


  16. SIMNER PJ, Musser KA, Mitchell K, Wise MG, et al
    Multicenter Evaluation of the Acuitas (R) AMR Gene Panel for Detection of an Extended Panel of Antimicrobial Resistance Genes among Bacterial Isolates.
    J Clin Microbiol. 2022 Feb 9:JCM0209821. doi: 10.1128/JCM.02098.
    PubMed     Abstract available


    January 2022
  17. PHOLWAT S, Liu J, Taniuchi M, Haque R, et al
    Use of Molecular Methods To Detect Shigella and Infer Phenotypic Resistance in a Shigella Treatment Study.
    J Clin Microbiol. 2022;60:e0177421.
    PubMed     Abstract available


  18. WALTENBURG MA, Shugart A, Loy JD, Tewari D, et al
    A survey of current activities and technologies used to detect carbapenem resistance in bacteria isolated from companion animals at veterinary diagnostic laboratories-United States, 2020.
    J Clin Microbiol. 2022 Jan 5:JCM0215421. doi: 10.1128/JCM.02154.
    PubMed     Abstract available


    November 2021
  19. HALPIN AL, McDonald LC, Elkins CA
    Framing Bacterial Genomics for Public Health (Care).
    J Clin Microbiol. 2021;59:e0013521.
    PubMed     Abstract available


  20. WHITFIELD MG, Engelthaler DM, Allender C, Folkerts M, et al
    Comparative Performance of Genomic Methods for the Detection of Pyrazinamide Resistance and Heteroresistance in Mycobacterium tuberculosis.
    J Clin Microbiol. 2021 Nov 10:JCM0190721. doi: 10.1128/JCM.01907.
    PubMed     Abstract available


    October 2021
  21. WOOD GE, Jensen NL, Astete S, Jensen JS, et al
    Azithromycin and Doxycycline Resistance Profiles of U.S. Mycoplasma genitalium Strains and Their Association with Treatment Outcomes.
    J Clin Microbiol. 2021;59:e0081921.
    PubMed     Abstract available


    September 2021
  22. BIZOT E, Cointe A, Smadja N, Sergentet D, et al
    Improved molecular diagnosis and culture of the emerging heteropathotype enterohemorrhagic Escherichia coli O80:H2 using its non-melibiose-fermenting and antibiotic-resistance properties.
    J Clin Microbiol. 2021 Sep 29:JCM0153021. doi: 10.1128/JCM.01530.
    PubMed     Abstract available


  23. ITO CAS, Bail L, Arend LNVS, Silva KO, et al
    Evaluation of Microscan WalkAway for determination of ceftazidime/avibactam and ceftolozane/tazobactam susceptibility in carbapenem-resistant Gram-negative bacilli.
    J Clin Microbiol. 2021 Sep 29:JCM0153621. doi: 10.1128/JCM.01536.
    PubMed     Abstract available


  24. IWAO Y, Mori S, Ato M, Nakata N, et al
    Simultaneous Determination of Mycobacterium leprae Drug Resistance and Single-Nucleotide Polymorphism Genotype by Use of Nested Multiplex PCR with Amplicon Sequencing.
    J Clin Microbiol. 2021;59:e0081421.
    PubMed     Abstract available


    August 2021
  25. GAMMEL N, Ross TL, Lewis S, Olson M, et al
    Comparison of an Automated Plate Assessment System (APAS Independence) and Artificial Intelligence (AI) to Manual Plate Reading of Methicillin-resistant and Methicillin-susceptible Staphylococcus aureus Chromagar Surveillance Cultures.
    J Clin Microbiol. 2021 Aug 11:JCM0097121. doi: 10.1128/JCM.00971.
    PubMed     Abstract available


  26. VENTER JME, Muller EE, Mahlangu MP, Kularatne RS, et al
    Treponema pallidum macrolide resistance and molecular epidemiology in southern Africa, 2008-2018.
    J Clin Microbiol. 2021 Aug 4:JCM0238520. doi: 10.1128/JCM.02385.
    PubMed     Abstract available


    July 2021
  27. EROL E, Scortti M, Fortner J, Patel M, et al
    Antimicrobial resistance spectrum conferred by pRErm46 of emerging macrolide (multidrug)-resistant Rhodococcus equi.
    J Clin Microbiol. 2021 Jul 28:JCM0114921. doi: 10.1128/JCM.01149.
    PubMed     Abstract available


  28. CHU SV, Vu ST, Nguyen HM, Le NT, et al
    Fast and sensitive real-time PCR detection of major antiviral drug-resistance mutations in chronic hepatitis B patients using a predesigned panel of Locked-Nucleic-Acid TaqMan probes.
    J Clin Microbiol. 2021 Jul 28:JCM0093621. doi: 10.1128/JCM.00936.
    PubMed     Abstract available


  29. MARRAS SAE, Chen L, Shashkina E, Davidson RM, et al
    A Molecular-Beacon-Based Multiplex Real-Time PCR Assay To Distinguish Mycobacterium abscessus Subspecies and Determine Macrolide Susceptibility.
    J Clin Microbiol. 2021;59:e0045521.
    PubMed     Abstract available


  30. BERINSON B, Both A, Berneking L, Christner M, et al
    Usefulness of BioFire FilmArray BCID2 for Blood Culture Processing in Clinical Practice.
    J Clin Microbiol. 2021;59:e0054321.
    PubMed     Abstract available


    June 2021
  31. FOUDRAINE DE, Strepis N, Klaassen CHW, Raaphorst MN, et al
    Rapid and Accurate Detection of Aminoglycoside-Modifying Enzymes and 16S rRNA Methyltransferases by Targeted Liquid Chromatography-Tandem Mass Spectrometry.
    J Clin Microbiol. 2021;59:e0046421.
    PubMed     Abstract available


  32. MEYER SAUTEUR PM, Panisova E, Seiler M, Theiler M, et al
    Mycoplasma pneumoniae Genotypes and Clinical Outcome in Children.
    J Clin Microbiol. 2021;59:e0074821.
    PubMed     Abstract available


    May 2021
  33. KHAN A, Rivas LM, Spencer M, Martinez R, et al
    Correction for Khan et al., "A Multicenter Study To Evaluate Ceftaroline Breakpoints: Performance in an Area with High Prevalence of Methicillin-Resistant Staphylococcus aureus Sequence Type 5 Lineage".
    J Clin Microbiol. 2021;59.
    PubMed    


  34. YEE R, Dien Bard J, Simner PJ
    The Genotype-to-Phenotype Dilemma: How Should Laboratories Approach Discordant Susceptibility Results?
    J Clin Microbiol. 2021;59.
    PubMed     Abstract available


    April 2021
  35. KAKIUCHI T, Miyata I, Kimura R, Shimomura G, et al
    Clinical evaluation of a novel point-of-care assay to detect Mycoplasma pneumoniae and associated macrolide resistant mutations.
    J Clin Microbiol. 2021 Apr 28. pii: JCM.03245-20. doi: 10.1128/JCM.03245.
    PubMed     Abstract available


    February 2021
  36. KLEIN M, Bacher J, Barth S, Atrzadeh F, et al
    Multicenter Evaluation of the Unyvero Platform for Testing Bronchoalveolar Lavage Fluid.
    J Clin Microbiol. 2021;59.
    PubMed     Abstract available


  37. MARRERO ROLON R, Cunningham SA, Mandrekar JN, Polo ET, et al
    Clinical Evaluation of a Real-Time PCR Assay for Simultaneous Detection of Helicobacter pylori and Genotypic Markers of Clarithromycin Resistance Directly from Stool.
    J Clin Microbiol. 2021 Feb 3. pii: JCM.03040-20. doi: 10.1128/JCM.03040.
    PubMed     Abstract available


    January 2021
  38. SUKHUM KV, Jean S, Wallace M, Anderson N, et al
    Genomic Characterization of Emerging Bacterial Uropathogen Neisseria meningitidis, Which Was Misidentified as Neisseria gonorrhoeae by Nucleic Acid Amplification Testing.
    J Clin Microbiol. 2021;59.
    PubMed     Abstract available


    December 2020
  39. CAO Y, Parmar H, Gaur RL, Lieu D, et al
    Xpert MTB/XDR: A ten-color reflex assay suitable for point of care settings to detect isoniazid-, fluoroquinolone-, and second-line injectable drug-resistance directly from Mycobacterium tuberculosis positive sputum.
    J Clin Microbiol. 2020 Dec 9. pii: JCM.02314-20. doi: 10.1128/JCM.02314.
    PubMed     Abstract available


    November 2020
  40. LIU HC, Gao YL, Li DF, Zhao XY, et al
    Value of Xpert MTB/RIF Using Bronchoalveolar Lavage Fluid for the Diagnosis of Pulmonary Tuberculosis: A Systematic Review and Meta-Analysis.
    J Clin Microbiol. 2020 Nov 11. pii: JCM.02170-20. doi: 10.1128/JCM.02170.
    PubMed     Abstract available


    September 2020
  41. SORIA ME, Garcia-Crespo C, Martinez-Gonzalez B, Vazquez-Sirvent L, et al
    Amino acid substitutions associated with treatment failure of hepatitis C virus infection.
    J Clin Microbiol. 2020 Sep 30. pii: JCM.01985-20. doi: 10.1128/JCM.01985.
    PubMed     Abstract available


  42. YU LS, Rodriguez-Manzano J, Moser N, Moniri A, et al
    Rapid detection of azole-resistant Aspergillus fumigatus in clinical and environmental isolates using lab-on-a-chip diagnostic system.
    J Clin Microbiol. 2020 Sep 9. pii: JCM.00843-20. doi: 10.1128/JCM.00843.
    PubMed     Abstract available


    August 2020
  43. CATANZARO DG, Colman RE, Linger Y, Georghiou SB, et al
    Laboratory evaluation of a lateral-flow cell for molecular detection of first-line and second-line anti-tuberculosis drug resistance.
    J Clin Microbiol. 2020 Aug 19. pii: JCM.01417-20. doi: 10.1128/JCM.01417.
    PubMed     Abstract available


    January 2020
  44. GARGIS AS, Yoo BB, Lonsway DR, Anderson K, et al
    Difficult-to-Detect Staphylococcus aureus: mecA-positive Isolates Associated with Oxacillin and Cefoxitin False-Susceptible Results.
    J Clin Microbiol. 2020 Jan 29. pii: JCM.02038-19. doi: 10.1128/JCM.02038.
    PubMed     Abstract available


  45. PICHON M, Pichard B, Barrioz T, Plouzeau C, et al
    Diagnostic accuracy of a non-invasive test for the detection of Helicobacter pylori and resistance to clarithromycin in stool by Real-Time PCR Amplidiag((R)) H. pylori + ClariR assay.
    J Clin Microbiol. 2020 Jan 29. pii: JCM.01787-19. doi: 10.1128/JCM.01787.
    PubMed     Abstract available


  46. GREEN DA, Macesic N, Uhlemann AC, Lopez M, et al
    Evaluation of Calcium-Enhanced Media for Colistin Susceptibility Testing by Gradient Agar Diffusion and Broth Microdilution.
    J Clin Microbiol. 2020;58.
    PubMed     Abstract available


  47. BIAGI M, Tan X, Wu T, Jurkovic M, et al
    Activity of Potential Alternative Treatment Agents for Stenotrophomonas maltophilia Isolates Nonsusceptible to Levofloxacin and/or Trimethoprim-Sulfamethoxazole.
    J Clin Microbiol. 2020;58.
    PubMed     Abstract available


Thank you for your interest in scientific medicine.


AMEDEO Drug Resistance is free of charge.
This policy is made possible thanks to a media sponsorship by Boehringer Ingelheim.

Design: