Retrieve available abstracts of 72 articles: HTML format
Single Articles
October 2025
YUKAWA K, Harada S, Komori K, Hayama B, et al Corynebacterium striatum infections in oncologic patients: clinical spectrum,
resistance profiles, and evidence of nosocomial transmission.
J Clin Microbiol. 2025;63:e0082925. PubMedAbstract available
ARMSTRONG DT, Baird ECE, Pretty L, D'Agostino K, et al Diagnostics and new treatment regimens for TB: can the Xpert MTB/XDR assay fill
the gap for fluoroquinolone testing?
J Clin Microbiol. 2025;63:e0064325. PubMedAbstract available
September 2025
BRANDAO AP, Ferreira FMdA, Simeao FCdS, Ferrazoli L, et al Off-label evaluation of the BD MAX MDR-TB assay for rapid diagnosis of rifampicin
and isoniazid resistance of Mycobacterium tuberculosis clinical isolates in a
high-volume reference laboratory.
J Clin Microbiol. 2025 Sep 23:e0091225. doi: 10.1128/jcm.00912. PubMedAbstract available
SCHUETZ AN, Ferrell A, Hindler JA, Humphries R, et al Overview of changes in the Clinical and Laboratory Standards Institute
Performance Standards for Antimicrobial Susceptibility Testing: M100 32nd and
33rd editions.
J Clin Microbiol. 2025;63:e0162323. PubMedAbstract available
FISCHER-WELLENBORN M, Imkamp F, Pereira Pires V, Zbinden R, et al Antibiotic resistance profiles of seven genomospecies of Corynebacterium jeikeium
analyzed by whole genome sequencing.
J Clin Microbiol. 2025 Sep 3:e0041825. doi: 10.1128/jcm.00418. PubMedAbstract available
SANCHEZ BC, Sayeed H, Niles DT, Dunn JJ, et al ?Clinical performance of a syndromic panel for direct identification of pathogens
and antimicrobial resistance markers in pediatric osteoarticular and pleural
space infections.
J Clin Microbiol. 2025 Sep 2:e0062125. doi: 10.1128/jcm.00621. PubMedAbstract available
August 2025
RAJAGOPALAN S, Das L, Kohlerschmidt DJ, Rourke AK, et al Luciferase reporter mycobacteriophage (TM4::GeNL) enables rapid assessment of
drug susceptibilities and inducible macrolide resistance in Mycobacterium
abscessus complex.
J Clin Microbiol. 2025 Aug 20:e0084125. doi: 10.1128/jcm.00841. PubMedAbstract available
SIMNER PJ, Harris H, Jacobs E, Stambaugh H, et al Establishing Clinical and Laboratory Standards Institute M45 antimicrobial
susceptibility testing methods and breakpoints for Pseudomonas other than
Pseudomonas aeruginosa.
J Clin Microbiol. 2025;63:e0036825. PubMedAbstract available
July 2025
KOENIG C, Nicolau DP, Asempa T Sulbactam-durlobactam in combination with aztreonam and carbapenems against
carbapenem-resistant Acinetobacter baumannii: an assessment using the MIC-based
broth disk elution.
J Clin Microbiol. 2025 Jul 24:e0070925. doi: 10.1128/jcm.00709. PubMed
HARADA S, Komori K, Yukawa K, Hayama B, et al Genomic epidemiology and antimicrobial resistance of Corynebacterium
macclintockiae, the predominant species of human pathogens within the
Corynebacterium jeikeium complex.
J Clin Microbiol. 2025 Jul 24:e0050025. doi: 10.1128/jcm.00500. PubMedAbstract available
KUTI JL, Lutgring JD, Simner PJ, Naccache SN, et al Point-Counterpoint: Cascade reporting-useful tool to support antimicrobial
stewardship, or dangerously misleading.
J Clin Microbiol. 2025;63:e0170824. PubMedAbstract available
PRIOR K, Becker K, Brandt C, Cabal Rosel A, et al Accurate and reproducible whole-genome genotyping for bacterial genomic
surveillance with Nanopore sequencing data.
J Clin Microbiol. 2025;63:e0036925. PubMedAbstract available
SIOPI M, Leventaki S, Pachoulis I, Spruijtenburg B, et al Evaluation of the MIC test strips for antifungal susceptibility testing of
Candidozyma auris (Candida auris) using a representative international collection
of isolates.
J Clin Microbiol. 2025 Jul 3:e0039925. doi: 10.1128/jcm.00399. PubMedAbstract available
CALDERA JR, Dayo A, Wiederhold N, Yang S, et al Development and validation of next-generation sequencing-based clinical test for
triazole resistance prediction in Aspergillus fumigatus.
J Clin Microbiol. 2025 Jul 1:e0029125. doi: 10.1128/jcm.00291. PubMedAbstract available
June 2025
MARBANIANG YV, Leto D, Almohri H, Hasan MR, et al Treatment and diagnostic challenges associated with the novel and rapidly
emerging antifungal-resistant dermatophyte, Trichophyton indotineae.
J Clin Microbiol. 2025;63:e0140724. PubMedAbstract available
HARRIS H, Stambaugh H, Jacobs E, Bhalodi A, et al Defining antimicrobial susceptibility testing methods and breakpoints among
Achromobacter species.
J Clin Microbiol. 2025;63:e0026425. PubMedAbstract available
TU C, Su B, Xiong Y, Xia Z, et al Identification and quantification of gyrA variants in fluoroquinolone-resistant
Mycobacterium tuberculosis in a MeltArray reaction.
J Clin Microbiol. 2025 Jun 3:e0014625. doi: 10.1128/jcm.00146. PubMedAbstract available
May 2025
SMITH DJ, Melhem MSC, Dirven J, de Azevedo CMPeS, et al Establishment of epidemiological cutoff values for Fonsecaea pedrosoi, the
primary etiologic agent of chromoblastomycosis, and eight antifungal medications.
J Clin Microbiol. 2025;63:e0190324. PubMedAbstract available
DEMARCO MG, Field AM, Donohue LE, Cox HL, et al Impact of media brand on cefiderocol disk diffusion results.
J Clin Microbiol. 2025;63:e0164824. PubMedAbstract available
SOBKOWIAK A, Schwierzeck V, van Almsick V, Scherff N, et al The dark matter of bacterial genomic surveillance-antimicrobial resistance
plasmid transmissions in the hospital setting.
J Clin Microbiol. 2025 May 12:e0012125. doi: 10.1128/jcm.00121. PubMedAbstract available
April 2025
HUMPHRIES RM, Simner PJ Major updates to FDA-recognized Clinical and Laboratory Standards Institute
breakpoints are a win for the fight against antimicrobial resistance.
J Clin Microbiol. 2025 Apr 14:e0010625. doi: 10.1128/jcm.00106. PubMedAbstract available
JIN Q-Y, Torres RC, Yang C, He LH, et al Population structure of Helicobacter pylori and antibiotic resistance-associated
variants in a high-risk area of gastric cancer.
J Clin Microbiol. 2025 Apr 11:e0003325. doi: 10.1128/jcm.00033. PubMedAbstract available
DIERCKX L, Rodriguez-Ruiz JP, Ekinci E, van Heirstraeten L, et al Pneumococcal genotype 23B1 as a driver of increased 23B serotype carriage,
penicillin non-susceptibility, and invasive disease in Belgium: a retrospective
analysis.
J Clin Microbiol. 2025;63:e0169624. PubMedAbstract available
CZECH MM, Cuellar-Rodriguez J, Kwon-Chung KJ, Stock F, et al Clinical significance and antifungal susceptibility profile of 103 clinical
isolates of Scedosporium species complex and Lomentospora prolificans obtained
from NIH patients.
J Clin Microbiol. 2025;63:e0155024. PubMedAbstract available
March 2025
EIGNER U, Koffer J, Betz U, Koglin J, et al Evaluation of the cobas MTB and MTB-RIF/INH assay in clinical samples for the
detection of Mycobacterium tuberculosis in respiratory specimens.
J Clin Microbiol. 2025 Mar 25:e0195924. doi: 10.1128/jcm.01959. PubMedAbstract available
YU S, Liu N, Xie Z, Zeng Y, et al Nanopore sequencing for precise detection of Mycobacterium tuberculosis and drug
resistance: a retrospective multicenter study in China.
J Clin Microbiol. 2025 Mar 19:e0181324. doi: 10.1128/jcm.01813. PubMedAbstract available
February 2025
PEIRANO G, Pitout JDD Rapidly spreading Enterobacterales with OXA-48-like carbapenemases.
J Clin Microbiol. 2025;63:e0151524. PubMedAbstract available
January 2025
MCTAGGART LR, Cronin K, Ruscica S, Patel SN, et al Emergence of terbinafine-resistant Trichophyton indotineae in Ontario, Canada,
2014-2023.
J Clin Microbiol. 2025;63:e0153524. PubMedAbstract available
December 2024
PENVEN M, Louazon M, Freret C, Sauron A, et al Comparative performances of the Qvella FAST system and conventional methods for
rapid identification and antibiotic susceptibility testing on monomicrobial
positive blood cultures.
J Clin Microbiol. 2024 Dec 20:e0133224. doi: 10.1128/jcm.01332. PubMedAbstract available
WINKLER ML, Rhomberg PR, Fedler KA, Huband MD, et al Use of voriconazole to predict susceptibility and resistance to isavuconazole for
Aspergillus fumigatus using CLSI methods and interpretive criteria.
J Clin Microbiol. 2024 Dec 20:e0120724. doi: 10.1128/jcm.01207. PubMedAbstract available
REN X, Suo B, Li C, Ping G, et al Comparative analysis of the detection of antibiotic genotypic resistance with
gastric mucosa, gastric fluid, and fecal samples in patients with Helicobacter
pylori infection.
J Clin Microbiol. 2024 Dec 16:e0103424. doi: 10.1128/jcm.01034. PubMedAbstract available
KHODADADI RB, El Zein S, Rivera O'Connor CG, Stevens RW, et al Retrospective analysis of antimicrobial susceptibility profiles of
non-diphtheriae Corynebacterium species from a tertiary hospital and reference
laboratory, 2012-2023.
J Clin Microbiol. 2024;62:e0119924. PubMedAbstract available
November 2024
SABOUR S, Harrington KRV, Martinson E, Bhatnagar AS, et al Characterization of carbapenem-resistant Enterobacterales and Pseudomonas
aeruginosa carrying multiple carbapenemase genes-Antimicrobial Resistance
Laboratory Network, 2018-2022.
J Clin Microbiol. 2024 Nov 20:e0122024. doi: 10.1128/jcm.01220. PubMedAbstract available
CHAN H-H, Wang Y-C, Jou R A simplified pyrazinamidase test for Mycobacterium tuberculosis pyrazinamide
antimicrobial susceptibility testing.
J Clin Microbiol. 2024 Nov 18:e0122724. doi: 10.1128/jcm.01227. PubMedAbstract available
OSTERMANN G, Korber-Irrgang B, Kruger A, Singh P, et al Performance evaluation of the Specific Reveal system for rapid antibiotic
susceptibility testing from positive blood cultures containing Gram-negative
pathogens.
J Clin Microbiol. 2024 Nov 15:e0069224. doi: 10.1128/jcm.00692. PubMedAbstract available
VALERIO DE LIMA A, Lima KdO, Cappellano P, Cifuentes S, et al Evaluation of the KPC/IMP/NDM/VIM/OXA-48 Combo Test Kit and Carbapenem-Resistant
K.N.I.V.O. Detection K-Set in detecting KPC variants.
J Clin Microbiol. 2024 Nov 14:e0112324. doi: 10.1128/jcm.01123. PubMed
YOUNG EL, Roach DJ, Martinsen MA, McGrath GEG, et al Clinical pilot of bacterial transcriptional profiling as a combined genotypic and
phenotypic antimicrobial susceptibility test.
J Clin Microbiol. 2024;62:e0099724. PubMedAbstract available
NG S, Tan CY, Yah JY, Osman NAB, et al Evaluation of the QIAstat-Dx BCID GN and GPF kits for direct identification and
antimicrobial resistance prediction from blood culture bottles.
J Clin Microbiol. 2024 Nov 6:e0116924. doi: 10.1128/jcm.01169. PubMedAbstract available
October 2024
MCHUGH JW, Bayless DR, Ranganath N, Stevens RW, et al Candida guilliermondii fungemia: a 12-year retrospective review of antimicrobial
susceptibility patterns at a reference laboratory and tertiary care center.
J Clin Microbiol. 2024 Oct 23:e0105724. doi: 10.1128/jcm.01057. PubMedAbstract available
GISKE CG, Bressan M, Fiechter F, Hinic V, et al GPT-4-based AI agents-the new expert system for detection of antimicrobial
resistance mechanisms?
J Clin Microbiol. 2024 Oct 17:e0068924. doi: 10.1128/jcm.00689. PubMedAbstract available
September 2024
MANUEL C, Maynard R, Simpkins S, Haro M, et al Evaluation of an expanded antibiotic resistance gene panel on prediction of
antimicrobial susceptibility results for Gram-negative bacteria in blood
cultures.
J Clin Microbiol. 2024 Sep 19:e0102024. doi: 10.1128/jcm.01020. PubMedAbstract available
LUUKINEN B, Aittoniemi J, Miikkulainen-Lahti T, Mentula S, et al Evaluation of the STANDARD M10 MDR-TB and MTB/NTM assays for the detection of
Mycobacterium tuberculosis, rifampicin and isoniazid resistance, and
nontuberculous mycobacteria in a low-incidence setting.
J Clin Microbiol. 2024 Sep 19:e0040224. doi: 10.1128/jcm.00402. PubMedAbstract available
CABIBBE AM, Moghaddasi K, Batignani V, Morgan GSK, et al Nanopore-based targeted sequencing test for direct tuberculosis identification,
genotyping, and detection of drug resistance mutations: a side-by-side comparison
of targeted next-generation sequencing technologies.
J Clin Microbiol. 2024 Sep 6:e0081524. doi: 10.1128/jcm.00815. PubMedAbstract available
August 2024
CHRISTIANS FC, Akhund-Zade J, Jarman K, Venkatasubrahmanyam S, et al Analytical and clinical validation of direct detection of antimicrobial
resistance markers by plasma microbial cell-free DNA sequencing.
J Clin Microbiol. 2024 Aug 28:e0042524. doi: 10.1128/jcm.00425. PubMedAbstract available
SMITH A, Wong-O'Brien B, Lieberman JA, Cookson BT, et al The Brief Case: A case of tinea corporis caused by drug-resistant Trichophyton
indotineae identified by broad-range fungal DNA sequencing.
J Clin Microbiol. 2024;62:e0023424. PubMed
PARANOS P, Pournaras S, Meletiadis J A single-layer spot assay for easy, fast, and high-throughput quantitation of
phages against multidrug-resistant Gram-negative pathogens.
J Clin Microbiol. 2024;62:e0074324. PubMedAbstract available
WANG H Practical updates in clinical antiviral resistance testing.
J Clin Microbiol. 2024;62:e0072823. PubMedAbstract available
July 2024
OMAR SV, Louw G, Ismail F, Liu X, et al Performance evaluation of the Xpert MTB/XDR test for the detection of drug
resistance to Mycobacterium tuberculosis among people diagnosed with tuberculosis
in South Africa.
J Clin Microbiol. 2024 Jul 26:e0022924. doi: 10.1128/jcm.00229. PubMedAbstract available
June 2024
MOORE HP, Palumbo PJ, Notarte KI, Fogel JM, et al Performance of the Applied Biosystems HIV-1 Genotyping Kit with Integrase.
J Clin Microbiol. 2024;62:e0013624. PubMedAbstract available
PEREYRE S, Henin N, Dolzy A, Guiraud J, et al Evaluation of commercial, customized microdilution plates for Ureaplasma parvum,
Ureaplasma urealyticum, and Mycoplasma hominis antimicrobial susceptibility
testing and determination of antimicrobial resistance prevalence in France.
J Clin Microbiol. 2024 Jun 4:e0022624. doi: 10.1128/jcm.00226. PubMedAbstract available
May 2024
SERRANO-LOBO J, Reigadas E, Munoz P, Escribano P, et al Azole resistance screening in Aspergillus fumigatus sensu stricto using the
azole-containing agar method (EUCAST E.Def 10.2): conidial suspension filtration
and inoculum adjustment before inoculum preparation may not be needed.
J Clin Microbiol. 2024 May 31:e0036924. doi: 10.1128/jcm.00369. PubMedAbstract available
MUNSON E, Moore J, Krueger T, Zapp A, et al Mycoplasmoides genitalium nucleic acid semi-quantitation and molecular macrolide
resistance detection via automated assays: gender and specimen source
considerations.
J Clin Microbiol. 2024 May 24:e0048524. doi: 10.1128/jcm.00485. PubMedAbstract available
FOUAD A, Simner PJ, Nicolau DP, Asempa TE, et al Comparison of BD Phoenix and disk diffusion to broth microdilution for
determining cefepime susceptibility among carbapenem-resistant Enterobacterales.
J Clin Microbiol. 2024 May 7:e0152023. doi: 10.1128/jcm.01520. PubMedAbstract available
April 2024
BROWN-ELLIOTT BA, Wallace RJ Jr, Wengenack NL, Workman SD, et al Erratum for Brown-Elliott et al., "Emergence of Inducible Macrolide Resistance in
Mycobacterium chelonae Due to Broad-Host-Range Plasmid and Chromosomal Variants
of the Novel 23S rRNA Methylase Gene, erm(55)".
J Clin Microbiol. 2024 Apr 4:e0041524. doi: 10.1128/jcm.00415. PubMed
MCELVANIA E, Mindel S, Lemstra J, Brands K, et al Automated detection of methicillin-resistant Staphylococcus aureus with the MRSA
CHROM imaging application on BD Kiestra Total Lab Automation System.
J Clin Microbiol. 2024 Apr 1:e0144523. doi: 10.1128/jcm.01445. PubMedAbstract available
March 2024
PEIRANO G, Castellanos LR, Matsumura Y, Chaffee R, et al Clinical validation of loop-mediated isothermal amplification for the detection
of Escherichia coli sequence type complex 131.
J Clin Microbiol. 2024;62:e0168723. PubMedAbstract available
January 2024
MISAS E, Seagle E, Jenkins EN, Rajeev M, et al Genomic description of acquired fluconazole- and echinocandin-resistance in
patients with serial Candida glabrata isolates.
J Clin Microbiol. 2024 Jan 24:e0114023. doi: 10.1128/jcm.01140. PubMedAbstract available
SIOPI M, Efstathiou I, Arendrup MC, Meletiadis J, et al Development of an agar-based screening method for terbinafine, itraconazole, and
amorolfine susceptibility testing of Trichophyton spp.
J Clin Microbiol. 2024;62:e0130823. PubMedAbstract available
FRATONI AJ, Roberts AL, Nicolau DP, Kuti JL, et al Effects of clinically achievable pulmonary antibiotic concentrations on the
recovery of bacteria: in vitro comparison of the BioFire FILMARRAY Pneumonia
Panel versus conventional culture methods in bronchoalveolar lavage fluid.
J Clin Microbiol. 2024;62:e0113323. PubMedAbstract available
SCHUETZ AN, Theel ES, Cole NC, Rothstein TE, et al Testing for Helicobacter pylori in an era of antimicrobial resistance.
J Clin Microbiol. 2024 Jan 9:e0073223. doi: 10.1128/jcm.00732. PubMedAbstract available
PFALLER MA, Carvalhaes CG, Rhomberg PR, Desphande LM, et al Trends in the activity of mold-active azole agents against Aspergillus fumigatus
clinical isolates with and without cyp51 alterations from Europe and North
America (2017-2021).
J Clin Microbiol. 2024 Jan 9:e0114123. doi: 10.1128/jcm.01141. PubMedAbstract available
December 2023
LOCKHART SR, Smith DJ, Gold JAW Trichophyton indotineae and other terbinafine-resistant dermatophytes in North
America.
J Clin Microbiol. 2023;61:e0090323. PubMedAbstract available
MCTAGGART LR, Eshaghi A, Hota S, Poutanen SM, et al First Canadian report of transmission of fluconazole-resistant Candida
parapsilosis within two hospital networks confirmed by genomic analysis.
J Clin Microbiol. 2023 Dec 19:e0116123. doi: 10.1128/jcm.01161. PubMedAbstract available
PRYCE TM, Foti OR, Haygarth EJ, Whiley DM, et al Maximizing the Neisseria gonorrhoeae confirmatory rate and the genotypic
detection of ciprofloxacin resistance for samples screened with cobas CT/NG.
J Clin Microbiol. 2023 Dec 12:e0103923. doi: 10.1128/jcm.01039. PubMedAbstract available
FREY E, Stapleton GS, Nichols MC, Gollarza LM, et al Antimicrobial resistance in multistate outbreaks of nontyphoidal Salmonella
infections linked to animal contact-United States, 2015-2018.
J Clin Microbiol. 2023 Dec 12:e0098123. doi: 10.1128/jcm.00981. PubMedAbstract available
November 2023
MOSTAFA HH Next-generation sequencing for cytomegalovirus genotypic antiviral resistance
testing.
J Clin Microbiol. 2023 Nov 22:e0130223. doi: 10.1128/jcm.01302. PubMedAbstract available
MALLORY MA, Hymas WC, Simmon KE, Pyne MT, et al Development and validation of a next-generation sequencing assay with open-access
analysis software for detecting resistance-associated mutations in CMV.
J Clin Microbiol. 2023 Nov 21:e0082923. doi: 10.1128/jcm.00829. PubMedAbstract available
BHATNAGAR AS, Machado M-J, Patterson L, Anderson K, et al Antimicrobial Resistance Laboratory Network's multisite evaluation of the
ThermoFisher Sensititre GN7F broth microdilution panel for antimicrobial
susceptibility testing.
J Clin Microbiol. 2023 Nov 16:e0079923. doi: 10.1128/jcm.00799. PubMedAbstract available
October 2023
DERBYSHIRE KM, Salfinger M Plasmid-mediated drug resistance in mycobacteria: the tip of the iceberg?
J Clin Microbiol. 2023;61:e0062823. PubMedAbstract available
LIU B, Gao J, Liu XF, Rao G, et al Direct prediction of carbapenem resistance in Pseudomonas aeruginosa by whole
genome sequencing and metagenomic sequencing.
J Clin Microbiol. 2023 Oct 12:e0061723. doi: 10.1128/jcm.00617. PubMedAbstract available
September 2023
SY I, Buhler N, Becker SL, Jung P, et al Evaluation of the Qvella FAST System and the FAST-PBC cartridge for rapid species
identification and antimicrobial resistance testing directly from positive blood
cultures.
J Clin Microbiol. 2023 Sep 28:e0056923. doi: 10.1128/jcm.00569. PubMedAbstract available
STRECK NT, Espy MJ, Ferber MJ, Klee EW, et al Use of next-generation sequencing to detect mutations associated with antiviral
drug resistance in cytomegalovirus.
J Clin Microbiol. 2023 Sep 26:e0042923. doi: 10.1128/jcm.00429. PubMedAbstract available