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Influenza

Free Subscription Articles published in PLoS Comput Biol Retrieve available abstracts of 170 articles: HTML format

Single Articles

January 2026
1. WU SX, Davis CN, Arnold M, Tildesley MJ, et al
   The role of ducks in detecting Highly Pathogenic Avian Influenza in small-scale backyard poultry farms.
   PLoS Comput Biol. 2026;22:e1013357.
   PubMed     Abstract available
   
   
   
2. DAVIS CN, Hill EM, Jewell CP, Rysava K, et al
   A modelling assessment of the impact of control measures on highly pathogenic avian influenza transmission in poultry in Great Britain.
   PLoS Comput Biol. 2026;22:e1013874.
   PubMed     Abstract available
   
   
   
3. MAYER-BLACKWELL K, Minervina A, Pogorelyy M, Rawat P, et al
   TCR2HLA: Calibrated inference of HLA genotypes from TCR repertoires enables identification of immunologically relevant metaclonotypes.
   PLoS Comput Biol. 2026;22:e1013767.
   PubMed     Abstract available
   
   
   
4. WANG Z, Zhou Z, Wang J, Yang L, et al
   Characterization of the heterogeneity in SARS-CoV-2 fitness dynamics via graph representation learning.
   PLoS Comput Biol. 2026;22:e1013582.
   PubMed     Abstract available
   
   
   December 2025
5. MORRIS DJ, Kennedy L, Black AJ
   Random time-shift approximation enables hierarchical Bayesian inference of mechanistic within-host viral dynamics models on large datasets.
   PLoS Comput Biol. 2025;21:e1013775.
   PubMed     Abstract available
   
   
   
6. LEFEBVRE A, Marechal V, Gloaguen A, Lambert A, et al
   Unsupervised detection and fitness estimation of emerging SARS-CoV-2 variants: Application to wastewater samples (ANRS0160).
   PLoS Comput Biol. 2025;21:e1013749.
   PubMed     Abstract available
   
   
   
7. PINERO S, Li X, Liu L, Li J, et al
   Integrative multi-omics framework for causal gene discovery in Long COVID.
   PLoS Comput Biol. 2025;21:e1013725.
   PubMed     Abstract available
   
   
   
8. SOMSEN ED, Septer KM, Field CJ, Patel DR, et al
   Quantifying viral pandemic potential from experimental transmission studies.
   PLoS Comput Biol. 2025;21:e1013808.
   PubMed     Abstract available
   
   
   November 2025
9. PARKER NT, Hong V, Davis GS, Pomichowski M, et al
   Clinical progression parameters associated with SARS-CoV-2, influenza, and respiratory syncytial virus infections in a large US integrated healthcare population.
   PLoS Comput Biol. 2025;21:e1013723.
   PubMed     Abstract available
   
   
   
10. ROY M, Clapham HE, Mishra S
    Incorporating human mobility to enhance epidemic response and estimate real-time reproduction numbers.
    PLoS Comput Biol. 2025;21:e1013642.
    PubMed     Abstract available
    
    
    
11. BILLINGS WZ, Ge Y, Skarlupka AL, Miller SL, et al
    Different antigenic distance metrics generate similar predictions of influenza vaccine response breadth despite moderate correlation.
    PLoS Comput Biol. 2025;21:e1013720.
    PubMed     Abstract available
    
    
    
12. WICHMANN RM, Robiati Bigoto MA, Chiavegatto Filho ADP
    Federated learning for COVID-19 mortality prediction in a multicentric sample of 21 hospitals.
    PLoS Comput Biol. 2025;21:e1013695.
    PubMed     Abstract available
    
    
    
13. TANG J, Rumack A, Wilder B, Rosenfeld R, et al
    Real-time forecasting of data revisions in epidemic surveillance streams.
    PLoS Comput Biol. 2025;21:e1013709.
    PubMed     Abstract available
    
    
    
14. GOZZI N, Chinazzi M, Davis JT, Gioannini C, et al
    Epydemix: An open-source Python package for epidemic modeling with integrated approximate Bayesian calibration.
    PLoS Comput Biol. 2025;21:e1013735.
    PubMed     Abstract available
    
    
    October 2025
15. O'NEILL X, White A, Northrup GR, Saad-Roy CM, et al
    Superspreading and the evolution of virulence.
    PLoS Comput Biol. 2025;21:e1013517.
    PubMed     Abstract available
    
    
    
16. TEITELBAUM CS, Casazza ML, Overton CT, Matchett EL, et al
    Host responses and viral traits interact to shape the impacts of climate warming on highly pathogenic avian influenza in migratory waterfowl.
    PLoS Comput Biol. 2025;21:e1013451.
    PubMed     Abstract available
    
    
    
17. PINETTES T, Leclerc QJ, Jean K, Temime L, et al
    The quarantine hospital strategy as a way to reduce both community and nosocomial transmission in the context of a COVID-like epidemic.
    PLoS Comput Biol. 2025;21:e1013548.
    PubMed     Abstract available
    
    
    
18. STEYN N, Chadeau-Hyam M, Elliott P, Donnelly CA, et al
    A Bayesian model for repeated cross-sectional epidemic prevalence survey data.
    PLoS Comput Biol. 2025;21:e1013515.
    PubMed     Abstract available
    
    
    
19. DU H, Zahn MV, Loo SL, Alleman TW, et al
    Improving policy design and epidemic response using integrated models of economic choice and disease dynamics with behavioral feedback.
    PLoS Comput Biol. 2025;21:e1013549.
    PubMed     Abstract available
    
    
    
20. TORRAS-PEREZ M, Yoon IHR, Weeratunga P, Ho LP, et al
    Topology across scales on heterogeneous cell data.
    PLoS Comput Biol. 2025;21:e1013460.
    PubMed     Abstract available
    
    
    
21. ERANTI P, Hegde M, Al Sium SM, Parra RG, et al
    Impact of the COVID-19 pandemic on computational biology early career researchers: A global retrospective study.
    PLoS Comput Biol. 2025;21:e1013554.
    PubMed     Abstract available
    
    
    
22. JOUBBI S, Micheli A, Milazzo P, Ciano G, et al
    Enhancing antibody-antigen interaction prediction with atomic flexibility.
    PLoS Comput Biol. 2025;21:e1013576.
    PubMed     Abstract available
    
    
    September 2025
23. HODGSON D, Hay J, Jarju S, Jobe D, et al
    serojump: A Bayesian tool for inferring infection timing and antibody kinetics from longitudinal serological data.
    PLoS Comput Biol. 2025;21:e1013467.
    PubMed     Abstract available
    
    
    
24. LIM D, Ko KT, Hong H, Lee H, et al
    A history-dependent approach for accurate initial condition estimation in epidemic models.
    PLoS Comput Biol. 2025;21:e1013438.
    PubMed     Abstract available
    
    
    
25. LOOKER J, Rock KS, Dyson L
    Identifying COVID-19 peaks using early warning signals.
    PLoS Comput Biol. 2025;21:e1013524.
    PubMed     Abstract available
    
    
    
26. BACKER JA, Klinkenberg D, Miura F, Wallinga J, et al
    Estimating the effectiveness of non-pharmaceutical interventions against COVID-19 transmission in the Netherlands.
    PLoS Comput Biol. 2025;21:e1013502.
    PubMed     Abstract available
    
    
    
27. BEREGI S, Parag KV
    Optimal algorithms for controlling infectious diseases in real time using noisy infection data.
    PLoS Comput Biol. 2025;21:e1013426.
    PubMed     Abstract available
    
    
    
28. LIN Y, Hay JA, Meng Y, Cowling BJ, et al
    Generalizing population RT-qPCR cycle threshold values-informed estimation of epidemiological dynamics: Impact of surveillance practices and pathogen variability.
    PLoS Comput Biol. 2025;21:e1013527.
    PubMed     Abstract available
    
    
    August 2025
29. TORRES-FLOREZ S, Flores Anato JL, He JH, Portilla VG, et al
    Evaluating COVID-19 vaccination policy in Quebec (Canada) using a data-driven dynamic transmission model.
    PLoS Comput Biol. 2025;21:e1013207.
    PubMed     Abstract available
    
    
    
30. SCIANNA M, Gallotti R, Tizzoni M, Artime O, et al
    Comparing the effectiveness of ring and block-vaccination strategies on networks.
    PLoS Comput Biol. 2025;21:e1013274.
    PubMed     Abstract available
    
    
    
31. TIZZANI M, Gauvin L
    Socioeconomic determinants of protective behaviors and contact patterns in the post-COVID-19 pandemic era: A cross-sectional study in Italy.
    PLoS Comput Biol. 2025;21:e1013262.
    PubMed     Abstract available
    
    
    
32. STEWART L, Evans S, Brevini T, Sampaziotis F, et al
    Modelling the potential use of pre-exposure prophylaxis to reduce nosocomial SARS-CoV-2 transmission.
    PLoS Comput Biol. 2025;21:e1013361.
    PubMed     Abstract available
    
    
    
33. REYNE B, Kamiya T, Djidjou-Demasse R, Alizon S, et al
    Leaky or polarised immunity: Non-Markovian modelling highlights the impact of immune memory assumptions.
    PLoS Comput Biol. 2025;21:e1013399.
    PubMed     Abstract available
    
    
    July 2025
34. NGANDU NK, Fielding BC, van Heusden P, Mcinga K, et al
    Population-level toggling of T cell immune escape at human leukocyte antigen anchor residues in SARS-CoV-2 Spike proteins, in an ethnically diverse population region.
    PLoS Comput Biol. 2025;21:e1013261.
    PubMed     Abstract available
    
    
    
35. LI Y, Gozzi N, Perra N
    Estimating behavioural relaxation induced by COVID-19 vaccines in the first months of their rollout.
    PLoS Comput Biol. 2025;21:e1013266.
    PubMed     Abstract available
    
    
    
36. JING S, Wang H
    Infectivity and fatality of influenza in pre- and post-COVID-19 pandemic year.
    PLoS Comput Biol. 2025;21:e1013229.
    PubMed     Abstract available
    
    
    
37. NGUYEN QD, Chang SL, Suster CJE, Rockett RJ, et al
    Multi-scale phylodynamic modelling of rapid punctuated pathogen evolution.
    PLoS Comput Biol. 2025;21:e1013295.
    PubMed     Abstract available
    
    
    
38. ABER R, Di Y, Dalziel BD
    Time-series modeling of epidemics in complex populations: Detecting changes in incidence volatility over time.
    PLoS Comput Biol. 2025;21:e1012882.
    PubMed     Abstract available
    
    
    
39. GONG R, Feng Z, Zhang Y
    Using homologous network to identify reassortment risk in H5Nx avian influenza viruses.
    PLoS Comput Biol. 2025;21:e1013301.
    PubMed     Abstract available
    
    
    
40. KEITHLEY J, Choudhuri A, Adhikari B, Pemmaraju SV, et al
    Analyzing greedy vaccine allocation algorithms for metapopulation disease models.
    PLoS Comput Biol. 2025;21:e1012539.
    PubMed     Abstract available
    
    
    June 2025
41. DEICHMANN J, Barda N, Canetti M, Peretz Y, et al
    Predicting antibody kinetics and duration of protection against SARS-CoV-2 following vaccination from sparse serological data.
    PLoS Comput Biol. 2025;21:e1013192.
    PubMed     Abstract available
    
    
    
42. VOUTOURI C, Munn LL, Stylianopoulos T, Jain RK, et al
    Biomarkers of mRNA vaccine efficacy derived from mechanistic modeling of tumor-immune interactions.
    PLoS Comput Biol. 2025;21:e1013163.
    PubMed     Abstract available
    
    
    
43. CHEN S, Venkatesan S, Arnetorp S, Bergenheim K, et al
    Features influencing the health and economic impact of preventing COVID-19 in immunocompromised individuals.
    PLoS Comput Biol. 2025;21:e1013072.
    PubMed     Abstract available
    
    
    
44. GAZEAU ST, Deng X, Brunet-Ratnasingham E, Kaufmann DE, et al
    Using virtual patient cohorts to uncover immune response differences in cancer and immunosuppressed COVID-19 patients.
    PLoS Comput Biol. 2025;21:e1013170.
    PubMed     Abstract available
    
    
    
45. MURPH AC, Gibson GC, Amona EB, Beesley LJ, et al
    Synthetic method of analogues for emerging infectious disease forecasting.
    PLoS Comput Biol. 2025;21:e1013203.
    PubMed     Abstract available
    
    
    May 2025
46. POLCZ P, Reguly IZ, Tornai K, Juhasz J, et al
    Smart epidemic control: A hybrid model blending ODEs and agent-based simulations for optimal, real-world intervention planning.
    PLoS Comput Biol. 2025;21:e1013028.
    PubMed     Abstract available
    
    
    
47. MEDINA CM, Palacios JA, Minin VM
    Accounting for reporting delays in real-time phylodynamic analyses with preferential sampling.
    PLoS Comput Biol. 2025;21:e1012970.
    PubMed     Abstract available
    
    
    April 2025
48. WU L, Baker CM, Tierney N, Carville K, et al
    Quantifying the impact of contact tracing interview prioritisation strategies on disease transmission: A modelling study.
    PLoS Comput Biol. 2025;21:e1012906.
    PubMed     Abstract available
    
    
    
49. POZZATI G, Flores SC
    Combining flipped-classroom and spaced-repetition learning in a master-level bioinformatics course.
    PLoS Comput Biol. 2025;21:e1012863.
    PubMed     Abstract available
    
    
    
50. TEOH YC, Noor MS, Aghakhani S, Girton J, et al
    Viral escape-inspired framework for structure-guided dual bait protein biosensor design.
    PLoS Comput Biol. 2025;21:e1012964.
    PubMed     Abstract available
    
    
    
51. HODCROFT EB, Wohlfender MS, Neher RA, Riou J, et al
    Estimating Re and overdispersion in secondary cases from the size of identical sequence clusters of SARS-CoV-2.
    PLoS Comput Biol. 2025;21:e1012960.
    PubMed     Abstract available
    
    
    
52. GROTBERG JB, Romano F, Grotberg JC
    Flow mechanisms of the air-blood barrier.
    PLoS Comput Biol. 2025;21:e1012917.
    PubMed     Abstract available
    
    
    
53. FERRAZ MVF, Adan WCS, Lima TE, Santos AJC, et al
    Design of nanobody targeting SARS-CoV-2 spike glycoprotein using CDR-grafting assisted by molecular simulation and machine learning.
    PLoS Comput Biol. 2025;21:e1012921.
    PubMed     Abstract available
    
    
    
54. ZHANG R, Tai J, Yao Q, Yang W, et al
    Behavior-driven forecasts of neighborhood-level COVID-19 spread in New York City.
    PLoS Comput Biol. 2025;21:e1012979.
    PubMed     Abstract available
    
    
    
55. KOLAR MR, Kobzarenko V, Mitra D
    Efficient discovery of frequently co-occurring mutations in a sequence database with matrix factorization.
    PLoS Comput Biol. 2025;21:e1012391.
    PubMed     Abstract available
    
    
    March 2025
56. EALES O, Shearer FM, McCaw JM
    How immunity shapes the long-term dynamics of influenza H3N2.
    PLoS Comput Biol. 2025;21:e1012893.
    PubMed     Abstract available
    
    
    
57. AMARAL AVR, Wolffram D, Moraga P, Bracher J, et al
    Post-processing and weighted combination of infectious disease nowcasts.
    PLoS Comput Biol. 2025;21:e1012836.
    PubMed     Abstract available
    
    
    
58. VON HOENE E, Roess A, Kavak H, Anderson T, et al
    Synthetic population generation with public health characteristics for spatial agent-based models.
    PLoS Comput Biol. 2025;21:e1012439.
    PubMed     Abstract available
    
    
    
59. WANG M, Patsenker J, Li H, Kluger Y, et al
    Supervised fine-tuning of pre-trained antibody language models improves antigen specificity prediction.
    PLoS Comput Biol. 2025;21:e1012153.
    PubMed     Abstract available
    
    
    February 2025
60. BANHOLZER N, Middelkoop K, Leukes J, Weingartner E, et al
    Estimating Mycobacterium tuberculosis transmission in a South African clinic: Spatiotemporal model based on person movements.
    PLoS Comput Biol. 2025;21:e1012823.
    PubMed     Abstract available
    
    
    
61. LOMBARD B, Moultrie H, Pulliam JRC, van Schalkwyk C, et al
    Simulation-based validation of a method to detect changes in SARS-CoV-2 reinfection risk.
    PLoS Comput Biol. 2025;21:e1012792.
    PubMed     Abstract available
    
    
    
62. LI W, Chen X, Liu S, Zhang C, et al
    Using a multi-strain infectious disease model with physical information neural networks to study the time dependence of SARS-CoV-2 variants of concern.
    PLoS Comput Biol. 2025;21:e1012778.
    PubMed     Abstract available
    
    
    
63. SIMPSON J, Kasson PM
    Structural prediction of chimeric immunogen candidates to elicit targeted antibodies against betacoronaviruses.
    PLoS Comput Biol. 2025;21:e1012812.
    PubMed     Abstract available
    
    
    
64. SHEN X, Rumack A, Wilder B, Tibshirani RJ, et al
    Nowcasting reported covid-19 hospitalizations using de-identified, aggregated medical insurance claims data.
    PLoS Comput Biol. 2025;21:e1012717.
    PubMed     Abstract available
    
    
    
65. GAO S, Chakraborty AK, Greiner R, Lewis MA, et al
    Early detection of disease outbreaks and non-outbreaks using incidence data: A framework using feature-based time series classification and machine learning.
    PLoS Comput Biol. 2025;21:e1012782.
    PubMed     Abstract available
    
    
    
66. CASABURI P, Dall'Amico L, Gozzi N, Kalimeri K, et al
    Resilience of mobility network to dynamic population response across COVID-19 interventions: Evidences from Chile.
    PLoS Comput Biol. 2025;21:e1012802.
    PubMed     Abstract available
    
    
    
67. ZHAN X, Xu Q, Zheng Y, Lu G, et al
    Reliability-enhanced data cleaning in biomedical machine learning using inductive conformal prediction.
    PLoS Comput Biol. 2025;21:e1012803.
    PubMed     Abstract available
    
    
    January 2025
68. BADROU A, Mariano CA, Ramirez GO, Shankel M, et al
    Towards constructing a generalized structural 3D breathing human lung model based on experimental volumes, pressures, and strains.
    PLoS Comput Biol. 2025;21:e1012680.
    PubMed     Abstract available
    
    
    
69. BOTTCHER L, D'Orsogna MR, Chou T
    Aggregating multiple test results to improve medical decision-making.
    PLoS Comput Biol. 2025;21:e1012749.
    PubMed     Abstract available
    
    
    December 2024
70. ABRAHAM AA, Tan ZC, Shrestha P, Bozich ER, et al
    A multivalent binding model infers antibody Fc species from systems serology.
    PLoS Comput Biol. 2024;20:e1012663.
    PubMed     Abstract available
    
    
    
71. ZAARAOUI H, Schumer C, Duval X, Hoen B, et al
    Modelling the effectiveness of antiviral treatment strategies to prevent household transmission of acute respiratory viruses.
    PLoS Comput Biol. 2024;20:e1012573.
    PubMed     Abstract available
    
    
    
72. CALMON L, Colosi E, Bassignana G, Barrat A, et al
    Preserving friendships in school contacts: An algorithm to construct synthetic temporal networks for epidemic modelling.
    PLoS Comput Biol. 2024;20:e1012661.
    PubMed     Abstract available
    
    
    
73. FAJARDO-FONTIVEROS O, Mattei M, Burgio G, Granell C, et al
    Machine learning mathematical models for incidence estimation during pandemics.
    PLoS Comput Biol. 2024;20:e1012687.
    PubMed     Abstract available
    
    
    
74. ZHANG XY, Yu LL, Wang WY, Sun GQ, et al
    Estimating the time-varying effective reproduction number via Cycle Threshold-based Transformer.
    PLoS Comput Biol. 2024;20:e1012694.
    PubMed     Abstract available
    
    
    
75. ZUNKER H, Schmieding R, Kerkmann D, Schengen A, et al
    Novel travel time aware metapopulation models and multi-layer waning immunity for late-phase epidemic and endemic scenarios.
    PLoS Comput Biol. 2024;20:e1012630.
    PubMed     Abstract available
    
    
    
76. CHERIAN P, Kshirsagar J, Neekhra B, Deshkar G, et al
    BharatSim: An agent-based modelling framework for India.
    PLoS Comput Biol. 2024;20:e1012682.
    PubMed     Abstract available
    
    
    November 2024
77. SHE B, Smith RL, Pytlarz I, Sundaram S, et al
    A framework for counterfactual analysis, strategy evaluation, and control of epidemics using reproduction number estimates.
    PLoS Comput Biol. 2024;20:e1012569.
    PubMed     Abstract available
    
    
    October 2024
78. XIA F, Xiao Y, Ma J
    The optimal spatially-dependent control measures to effectively and economically eliminate emerging infectious diseases.
    PLoS Comput Biol. 2024;20:e1012498.
    PubMed     Abstract available
    
    
    
79. MATHEBULA D, Amankwah A, Amouzouvi K, Assamagan KA, et al
    Modelling the impact of vaccination on COVID-19 in African countries.
    PLoS Comput Biol. 2024;20:e1012456.
    PubMed     Abstract available
    
    
    
80. ANDRONICO A, Paireau J, Cauchemez S
    Integrating information from historical data into mechanistic models for influenza forecasting.
    PLoS Comput Biol. 2024;20:e1012523.
    PubMed     Abstract available
    
    
    September 2024
81. JIANG J, Meng X, Wang Y, Zhuang Z, et al
    Effect of aberrant fructose metabolism following SARS-CoV-2 infection on colorectal cancer patients' poor prognosis.
    PLoS Comput Biol. 2024;20:e1012412.
    PubMed     Abstract available
    
    
    
82. ABOUSAMRA E, Figgins M, Bedford T
    Fitness models provide accurate short-term forecasts of SARS-CoV-2 variant frequency.
    PLoS Comput Biol. 2024;20:e1012443.
    PubMed     Abstract available
    
    
    
83. OLIVEIRA ROSTER KI, Kissler SM, Omoregie E, Wang JC, et al
    Surveillance strategies for the detection of new pathogen variants across epidemiological contexts.
    PLoS Comput Biol. 2024;20:e1012416.
    PubMed     Abstract available
    
    
    
84. MILLEVOI C, Pasetto D, Ferronato M
    A Physics-Informed Neural Network approach for compartmental epidemiological models.
    PLoS Comput Biol. 2024;20:e1012387.
    PubMed     Abstract available
    
    
    
85. LI K, Chaguza C, Stamp J, Chew YT, et al
    Genome-wide association study between SARS-CoV-2 single nucleotide polymorphisms and virus copies during infections.
    PLoS Comput Biol. 2024;20:e1012469.
    PubMed     Abstract available
    
    
    
86. TANG B, Ma K, Liu Y, Wang X, et al
    Managing spatio-temporal heterogeneity of susceptibles by embedding it into an homogeneous model: A mechanistic and deep learning study.
    PLoS Comput Biol. 2024;20:e1012497.
    PubMed     Abstract available
    
    
    
87. KUMAGAI Y
    BootCellNet, a resampling-based procedure, promotes unsupervised identification of cell populations via robust inference of gene regulatory networks.
    PLoS Comput Biol. 2024;20:e1012480.
    PubMed     Abstract available
    
    
    
88. KEELING MJ, Dyson L
    A retrospective assessment of forecasting the peak of the SARS-CoV-2 Omicron BA.1 wave in England.
    PLoS Comput Biol. 2024;20:e1012452.
    PubMed     Abstract available
    
    
    August 2024
89. BOUROS I, Hill EM, Keeling MJ, Moore S, et al
    Prioritising older individuals for COVID-19 booster vaccination leads to optimal public health outcomes in a range of socio-economic settings.
    PLoS Comput Biol. 2024;20:e1012309.
    PubMed     Abstract available
    
    
    
90. SAAD-ROY CM, Morris SE, Boots M, Baker RE, et al
    Impact of waning immunity against SARS-CoV-2 severity exacerbated by vaccine hesitancy.
    PLoS Comput Biol. 2024;20:e1012211.
    PubMed     Abstract available
    
    
    
91. LIN J, Aprahamian H, Golovko G
    A proactive/reactive mass screening approach with uncertain symptomatic cases.
    PLoS Comput Biol. 2024;20:e1012308.
    PubMed     Abstract available
    
    
    
92. BOLAJI AJ, Duggan AT
    In silico analyses identify sequence contamination thresholds for Nanopore-generated SARS-CoV-2 sequences.
    PLoS Comput Biol. 2024;20:e1011539.
    PubMed     Abstract available
    
    
    July 2024
93. LAU YC, Shan S, Wang D, Chen D, et al
    Forecasting of influenza activity and associated hospital admission burden and estimating the impact of COVID-19 pandemic on 2019/20 winter season in Hong Kong.
    PLoS Comput Biol. 2024;20:e1012311.
    PubMed     Abstract available
    
    
    
94. DOYLE NJ, Cumming F, Thompson RN, Tildesley MJ, et al
    When should lockdown be implemented? Devising cost-effective strategies for managing epidemics amid vaccine uncertainty.
    PLoS Comput Biol. 2024;20:e1012010.
    PubMed     Abstract available
    
    
    
95. ROSENBLATT E, Cook JD, DiRenzo GV, Grant EHC, et al
    Epidemiological modeling of SARS-CoV-2 in white-tailed deer (Odocoileus virginianus) reveals conditions for introduction and widespread transmission.
    PLoS Comput Biol. 2024;20:e1012263.
    PubMed     Abstract available
    
    
    
96. GABERNET G, Marquez S, Bjornson R, Peltzer A, et al
    nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework.
    PLoS Comput Biol. 2024;20:e1012265.
    PubMed     Abstract available
    
    
    June 2024
97. HILL EM, Petrou S, de Lusignan S, Yonova I, et al
    Correction: Seasonal influenza: Modelling approaches to capture immunity propagation.
    PLoS Comput Biol. 2024;20:e1012213.
    PubMed     Abstract available
    
    
    
98. ROJAS CHAVEZ RA, Fili M, Han C, Rahman SA, et al
    Mapping the Evolutionary Space of SARS-CoV-2 Variants to Anticipate Emergence of Subvariants Resistant to COVID-19 Therapeutics.
    PLoS Comput Biol. 2024;20:e1012215.
    PubMed     Abstract available
    
    
    
99. SHUBIN M, Brustad HK, Midtbo JE, Gunther F, et al
    The influence of cross-border mobility on the COVID-19 epidemic in Nordic countries.
    PLoS Comput Biol. 2024;20:e1012182.
    PubMed     Abstract available
    
    
    
100. SALWIG S, Drefs J, Lucke J
     Zero-shot denoising of microscopy images recorded at high-resolution limits.
     PLoS Comput Biol. 2024;20:e1012192.
     PubMed     Abstract available
     
     
     May 2024
101. HLADISH TJ, Pillai AN, Pearson CAB, Toh KB, et al
     Evaluating targeted COVID-19 vaccination strategies with agent-based modeling.
     PLoS Comput Biol. 2024;20:e1012128.
     PubMed     Abstract available
     
     
     
102. LOPEZ VK, Cramer EY, Pagano R, Drake JM, et al
     Challenges of COVID-19 Case Forecasting in the US, 2020-2021.
     PLoS Comput Biol. 2024;20:e1011200.
     PubMed     Abstract available
     
     
     
103. ASPLIN P, Keeling MJ, Mancy R, Hill EM, et al
     Epidemiological and health economic implications of symptom propagation in respiratory pathogens: A mathematical modelling investigation.
     PLoS Comput Biol. 2024;20:e1012096.
     PubMed     Abstract available
     
     
     
104. TRINITY L, Stege U, Jabbari H
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117. SHIN B, An G, Cockrell RC
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118. GRUNNILL M, Arino J, McCarthy Z, Bragazzi NL, et al
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120. RAMACHANDRAN A, Lumetta SS, Chen D
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126. ALAHAKOON P, Taylor PG, McCaw JM
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135. MUNDAY JD, Abbott S, Meakin S, Funk S, et al
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150. YANG W, Shaman J
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156. MICHALSKI M, Setny P
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