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  Genetics

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15.12.2025

5 Am J Hum Genet
1 BMC Cancer
1 Br J Cancer
1 Cell
1 Genome Res
3 Nat Rev Genet
2 Nat Rev Microbiol
2 Nature
2 PLoS Biol
2 PLoS Comput Biol
1 PLoS Genet
8 PLoS One
1 Proc Natl Acad Sci U S A


  Retrieve available abstracts of this week’s articles:
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Single Articles


    Am J Hum Genet


  1. Collaborative science in genomics: The value of data sharing and thoughtful stewardship.
    Am J Hum Genet. 2025;112:2819-2821.
    PubMed         Abstract available

  2. XUE D, Blue EE, Fullerton SM, Henrikson NB, et al
    Training competencies and recommendations for the next generation of public health genetics: Reflections from current leaders in the field.
    Am J Hum Genet. 2025;112:2860-2869.
    PubMed         Abstract available

  3. SOUILMI Y, Oliva A, Davidson R, Williams MP, et al
    Lessons learned: Recommendations for reproducible paleogenomic data analyses.
    Am J Hum Genet. 2025;112:2830-2841.
    PubMed         Abstract available

  4. TIBBEN BM, Gaedigk A, Gong L, Sangkuhl K, et al
    The Clinical Pharmacogenetics Implementation Consortium's consensus-based framework for assigning allele function.
    Am J Hum Genet. 2025;112:2842-2859.
    PubMed         Abstract available

  5. MEJIA-GARCIA A, Diaz-Papkovich A, Sillon G, D'Agostino D, et al
    Using the ancestral recombination graph to study the history of rare variants in founder populations.
    Am J Hum Genet. 2025;112:2973-2981.
    PubMed         Abstract available


    BMC Cancer

  6. ALLSOPP RC, Page K, Wren E, Nteliopoulos G, et al
    Concurrent genomic assessment of circulating tumour cells and ctDNA to guide therapy in metastatic breast cancer.
    BMC Cancer. 2025;25:1858.
    PubMed         Abstract available


    Br J Cancer

  7. WU WZ, Huang HC, Zhu GH, Liao LD, et al
    Serum multiomics prediction of prognosis and adverse reactions to concurrent chemoradiotherapy in patients with esophageal cancer.
    Br J Cancer. 2025 Oct 8. doi: 10.1038/s41416-025-03229.
    PubMed         Abstract available


    Cell

  8. LU T, Xie Y, Wang Y, Lin X, et al
    Protein restriction reprograms the multi-organ proteomic landscape of mouse aging.
    Cell. 2025;188:7309-7326.
    PubMed         Abstract available


    Genome Res

  9. RAEISI DEHKORDI S, Jia Z, Estabrook J, Hauenstein J, et al
    OMKar automates genome karyotyping using optical maps to identify constitutional abnormalities.
    Genome Res. 2025;35:2671-2681.
    PubMed         Abstract available


    Nat Rev Genet

  10. FERRETTI P, Johnson K, Priya S, Blekhman R, et al
    Genomics of host-microbiome interactions in humans.
    Nat Rev Genet. 2026;27:62-80.
    PubMed         Abstract available

  11. SZABO G, Eloe-Fadrosh EA, Pett-Ridge J, Woyke T, et al
    A genomic view of Earth's biomes.
    Nat Rev Genet. 2026;27:13-31.
    PubMed         Abstract available

  12. ROUX S, Coclet C
    Viromics approaches for the study of viral diversity and ecology in microbiomes.
    Nat Rev Genet. 2026;27:32-46.
    PubMed         Abstract available


    Nat Rev Microbiol

  13. GUNTHARD HF, Kusejko K, Kouyos RD
    Phylogenetics and molecular evolution to understand and curb the HIV pandemic.
    Nat Rev Microbiol. 2026;24:76-92.
    PubMed         Abstract available

  14. TORRES MONTAGUTH OE, Buddle S, Morfopoulou S, Breuer J, et al
    Clinical metagenomics for diagnosis and surveillance of viral pathogens.
    Nat Rev Microbiol. 2026;24:61-75.
    PubMed         Abstract available


    Nature

  15. LEVY S, Grau-Bove X, Kim IV, Najle SR, et al
    The evolution of facultative symbiosis in stony corals.
    Nature. 2025;648:368-376.
    PubMed         Abstract available

  16. COSENZA MR, Gaiatto A, Erarslan Uysal B, Andrades A, et al
    Origins of chromosome instability unveiled by coupled imaging and genomics.
    Nature. 2025;648:383-393.
    PubMed         Abstract available


    PLoS Biol

  17. VEZINA B, Cooper HB, Barlow CK, Rethoret-Pasty M, et al
    A metabolic atlas of the Klebsiella pneumoniae species complex reveals lineage-specific metabolism and capacity for intra-species co-operation.
    PLoS Biol. 2025;23:e3003559.
    PubMed         Abstract available

  18. HAMMOND MJ, Iorillo O, Faktorova D, Svobodova M, et al
    Subcellular proteomics of the protist Paradiplonema papillatum reveals the digestive capacity of the cell membrane and the plasticity of peroxisomes across euglenozoans.
    PLoS Biol. 2025;23:e3003319.
    PubMed         Abstract available


    PLoS Comput Biol

  19. REYNOLDS J, Pan C
    Benchmarking interpretability of deep learning for predictive genomics: Recall, precision, and variability of feature attribution.
    PLoS Comput Biol. 2025;21:e1013784.
    PubMed         Abstract available

  20. DODERO-ROJAS E, Mendieta A, Fehlis Y, Mayala N, et al
    Epigenetics is all you need: A transformer to decode chromatin structural compartments from the epigenome.
    PLoS Comput Biol. 2025;21:e1012326.
    PubMed         Abstract available


    PLoS Genet

  21. HUANG B, Durvasula A, Mousavi N, Ziaei-Jam H, et al
    Genome-wide selection inference at short tandem repeats.
    PLoS Genet. 2025;21:e1011959.
    PubMed         Abstract available


    PLoS One

  22. YARNES SC, Palladino N, Meidlinger DJ, Philips DR, et al
    DeltaBreed: A BrAPI-centric breeding data information system.
    PLoS One. 2025;20:e0324104.
    PubMed         Abstract available

  23. AHMED TF, Ahmed A, Haque Z, Azmi MB, et al
    Mapping the microRNA-mediated crosstalk between insulin resistance and Alzheimer's disease: A computational genomic insight.
    PLoS One. 2025;20:e0329056.
    PubMed         Abstract available

  24. GOMARD Y, Sanchez M, Caubit M, Roesch MA, et al
    First evaluation of genetic diversity and population structure of Phelsuma inexpectata (Gekkonidae), a critically endangered gecko endemic to Reunion Island.
    PLoS One. 2025;20:e0338217.
    PubMed         Abstract available

  25. OK L, Ohlund L, Inkster AM, Campbell KSJ, et al
    Effect of depression and serotonin reuptake inhibitors antidepressant treatment during pregnancy on protein expression in the human placenta: A quantitative proteomics analysis.
    PLoS One. 2025;20:e0322090.
    PubMed         Abstract available

  26. VASQUEZ JN, Doncel P, Camacho J, Ruiz E, et al
    Targeted virome deep sequencing reveals frequent herpesvirus detection in intestinal biopsies of inflammatory bowel disease patients.
    PLoS One. 2025;20:e0337322.
    PubMed         Abstract available

  27. SIGILAI H, Ogola E, Ilovi S
    Utilization of genomic services among physicians in Kenya.
    PLoS One. 2025;20:e0319364.
    PubMed         Abstract available

  28. SALLAH S, Warwicker J
    Computation suggests that the cell adhesion sub-proteome is enriched for sites of pH-dependence and charge burial.
    PLoS One. 2025;20:e0338186.
    PubMed         Abstract available

  29. YANG S, Kim HG
    Biologically-informed regional subset analysis with CatBoost for robust tissue-of-origin prediction.
    PLoS One. 2025;20:e0337106.
    PubMed         Abstract available


    Proc Natl Acad Sci U S A

  30. JANET-MAITRE M, Di Venanzio G, Jackson-Litteken CD, Scott NE, et al
    Intracellular Acinetobacter baumannii acts as a transient reservoir in lung infection via a "persist and resist" strategy.
    Proc Natl Acad Sci U S A. 2025;122:e2511369122.
    PubMed         Abstract available


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