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02.07.2018

2 JAMA
3 PLoS Comput Biol
9 PLoS Genet
29 PLoS One
2 Proc Natl Acad Sci U S A
2 Science


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Single Articles


    JAMA

  1. GILL J, Obley AJ, Prasad V
    Direct-to-Consumer Genetic Testing: The Implications of the US FDA's First Marketing Authorization for BRCA Mutation Testing.
    JAMA. 2018;319:2377-2378.
    PubMed     Text format    

  2. PHILLIPS KA
    Evolving Payer Coverage Policies on Genomic Sequencing Tests: Beginning of the End or End of the Beginning?
    JAMA. 2018;319:2379-2380.
    PubMed     Text format    


    PLoS Comput Biol

  3. BAILLIE JK, Bretherick A, Haley CS, Clohisey S, et al
    Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease.
    PLoS Comput Biol. 2018;14:e1005934.
    PubMed     Text format     Abstract available

  4. BAADEN M, Delalande O, Ferey N, Pasquali S, et al
    Ten simple rules to create a serious game, illustrated with examples from structural biology.
    PLoS Comput Biol. 2018;14:e1005955.
    PubMed     Text format    

  5. CORPAS M, Kovalevskaya NV, McMurray A, Nielsen FGG, et al
    A FAIR guide for data providers to maximise sharing of human genomic data.
    PLoS Comput Biol. 2018;14:e1005873.
    PubMed     Text format     Abstract available


    PLoS Genet

  6. COLLINO A, Termanini A, Nicoli P, Diaferia G, et al
    Sustained activation of detoxification pathways promotes liver carcinogenesis in response to chronic bile acid-mediated damage.
    PLoS Genet. 2018;14:e1007380.
    PubMed     Text format     Abstract available

  7. KEY FM, Abdul-Aziz MA, Mundry R, Peter BM, et al
    Human local adaptation of the TRPM8 cold receptor along a latitudinal cline.
    PLoS Genet. 2018;14:e1007298.
    PubMed     Text format     Abstract available

  8. SPROUFFSKE K, Aguilar-Rodriguez J, Sniegowski P, Wagner A, et al
    High mutation rates limit evolutionary adaptation in Escherichia coli.
    PLoS Genet. 2018;14:e1007324.
    PubMed     Text format     Abstract available

  9. RUBIN BE, Huynh TN, Welkie DG, Diamond S, et al
    High-throughput interaction screens illuminate the role of c-di-AMP in cyanobacterial nighttime survival.
    PLoS Genet. 2018;14:e1007301.
    PubMed     Text format     Abstract available

  10. CLEMENTE F, Gautier M, Vitalis R
    Inferring sex-specific demographic history from SNP data.
    PLoS Genet. 2018;14:e1007191.
    PubMed     Text format     Abstract available

  11. CHAO MJ, Kim KH, Shin JW, Lucente D, et al
    Population-specific genetic modification of Huntington's disease in Venezuela.
    PLoS Genet. 2018;14:e1007274.
    PubMed     Text format     Abstract available

  12. BROWNING SR, Browning BL, Daviglus ML, Durazo-Arvizu RA, et al
    Ancestry-specific recent effective population size in the Americas.
    PLoS Genet. 2018;14:e1007385.
    PubMed     Text format     Abstract available

  13. WOLF AB, Akey JM
    Outstanding questions in the study of archaic hominin admixture.
    PLoS Genet. 2018;14:e1007349.
    PubMed     Text format     Abstract available

  14. RIVAS MA, Avila BE, Koskela J, Huang H, et al
    Insights into the genetic epidemiology of Crohn's and rare diseases in the Ashkenazi Jewish population.
    PLoS Genet. 2018;14:e1007329.
    PubMed     Text format     Abstract available


    PLoS One

  15. GOMES VIANA JP, Bohrer Monteiro Siqueira MV, Araujo FL, Grando C, et al
    Genomic diversity is similar between Atlantic Forest restorations and natural remnants for the native tree Casearia sylvestris Sw.
    PLoS One. 2018;13:e0192165.
    PubMed     Text format     Abstract available

  16. XING M, Sun C, Li H, Hu S, et al
    Integrated analysis of transcriptome and proteome changes related to the Ogura cytoplasmic male sterility in cabbage.
    PLoS One. 2018;13:e0193462.
    PubMed     Text format     Abstract available

  17. AGARAS BC, Iriarte A, Valverde CF
    Genomic insights into the broad antifungal activity, plant-probiotic properties, and their regulation, in Pseudomonas donghuensis strain SVBP6.
    PLoS One. 2018;13:e0194088.
    PubMed     Text format     Abstract available

  18. RUSU I, Modi A, Vai S, Pilli E, et al
    Maternal DNA lineages at the gate of Europe in the 10th century AD.
    PLoS One. 2018;13:e0193578.
    PubMed     Text format     Abstract available

  19. ZENG L, Kortschak RD, Raison JM, Bertozzi T, et al
    Superior ab initio identification, annotation and characterisation of TEs and segmental duplications from genome assemblies.
    PLoS One. 2018;13:e0193588.
    PubMed     Text format     Abstract available

  20. BEKKER EI, Karabanov DP, Galimov YR, Haag CR, et al
    Phylogeography of Daphnia magna Straus (Crustacea: Cladocera) in Northern Eurasia: Evidence for a deep longitudinal split between mitochondrial lineages.
    PLoS One. 2018;13:e0194045.
    PubMed     Text format     Abstract available

  21. HARVEY AJ, O'Brien C, Lambshead J, Sheedy JR, et al
    Physiological oxygen culture reveals retention of metabolic memory in human induced pluripotent stem cells.
    PLoS One. 2018;13:e0193949.
    PubMed     Text format     Abstract available

  22. BUHNER S, Hahne H, Hartwig K, Li Q, et al
    Protease signaling through protease activated receptor 1 mediate nerve activation by mucosal supernatants from irritable bowel syndrome but not from ulcerative colitis patients.
    PLoS One. 2018;13:e0193943.
    PubMed     Text format     Abstract available

  23. SKEIE JM, Aldrich BT, Goldstein AS, Schmidt GA, et al
    Proteomic analysis of corneal endothelial cell-descemet membrane tissues reveals influence of insulin dependence and disease severity in type 2 diabetes mellitus.
    PLoS One. 2018;13:e0192287.
    PubMed     Text format     Abstract available

  24. BERG AT, Chakravorty S, Koh S, Grinspan ZM, et al
    Why West? Comparisons of clinical, genetic and molecular features of infants with and without spasms.
    PLoS One. 2018;13:e0193599.
    PubMed     Text format     Abstract available

  25. MIYAUCHI E, Furuta T, Ohtsuki S, Tachikawa M, et al
    Identification of blood biomarkers in glioblastoma by SWATH mass spectrometry and quantitative targeted absolute proteomics.
    PLoS One. 2018;13:e0193799.
    PubMed     Text format     Abstract available

  26. HUANG J, Wei H, Li L, Yu S, et al
    Transcriptome analysis of nitric oxide-responsive genes in upland cotton (Gossypium hirsutum).
    PLoS One. 2018;13:e0192367.
    PubMed     Text format     Abstract available

  27. NEWBERG LA, Chen X, Kodira CD, Zavodszky MI, et al
    Computational de novo discovery of distinguishing genes for biological processes and cell types in complex tissues.
    PLoS One. 2018;13:e0193067.
    PubMed     Text format     Abstract available

  28. CRONA K
    Recombination and peak jumping.
    PLoS One. 2018;13:e0193123.
    PubMed     Text format     Abstract available

  29. AUMAILLEY L, Roux-Dalvai F, Kelly I, Droit A, et al
    Vitamin C alters the amount of specific endoplasmic reticulum associated proteins involved in lipid metabolism in the liver of mice synthesizing a nonfunctional Werner syndrome (Wrn) mutant protein.
    PLoS One. 2018;13:e0193170.
    PubMed     Text format     Abstract available

  30. ZHANG X, Chen D, Xu G, Huang W, et al
    Molecular epidemiology and drug resistant mechanism in carbapenem-resistant Klebsiella pneumoniae isolated from pediatric patients in Shanghai, China.
    PLoS One. 2018;13:e0194000.
    PubMed     Text format     Abstract available

  31. DE OLIVEIRA UC, Nishiyama MY Jr, Dos Santos MBV, Santos-da-Silva AP, et al
    Proteomic endorsed transcriptomic profiles of venom glands from Tityus obscurus and T. serrulatus scorpions.
    PLoS One. 2018;13:e0193739.
    PubMed     Text format     Abstract available

  32. THAPA K, Manandhar S, Bista M, Shakya J, et al
    Assessment of genetic diversity, population structure, and gene flow of tigers (Panthera tigris tigris) across Nepal's Terai Arc Landscape.
    PLoS One. 2018;13:e0193495.
    PubMed     Text format     Abstract available

  33. TEIXEIRA MA, Sela N, Atamian HS, Bao E, et al
    Sequence analysis of the potato aphid Macrosiphum euphorbiae transcriptome identified two new viruses.
    PLoS One. 2018;13:e0193239.
    PubMed     Text format     Abstract available

  34. XI T, Zhang G
    Integrated analysis of tumor differentiation genes in pancreatic adenocarcinoma.
    PLoS One. 2018;13:e0193427.
    PubMed     Text format     Abstract available

  35. WOLDESEMAYAT AA, Modise DM, Gemeildien J, Ndimba BK, et al
    Cross-species multiple environmental stress responses: An integrated approach to identify candidate genes for multiple stress tolerance in sorghum (Sorghum bicolor (L.) Moench) and related model species.
    PLoS One. 2018;13:e0192678.
    PubMed     Text format     Abstract available

  36. PAGNUCO IA, Revuelta MV, Bondino HG, Brun M, et al
    HMMER Cut-off Threshold Tool (HMMERCTTER): Supervised classification of superfamily protein sequences with a reliable cut-off threshold.
    PLoS One. 2018;13:e0193757.
    PubMed     Text format     Abstract available

  37. ABEYRATNE SAE, Amarasekera SSC, Ranaweera LT, Salpadoru TB, et al
    The phylogenetic analysis of VP1 genomic region in foot-and-mouth disease virus serotype O isolates in Sri Lanka reveals the existence of 'Srl-97', a newly named endemic lineage.
    PLoS One. 2018;13:e0194077.
    PubMed     Text format     Abstract available

  38. CHAVARIE L, Howland KL, Harris LN, Hansen MJ, et al
    From top to bottom: Do Lake Trout diversify along a depth gradient in Great Bear Lake, NT, Canada?
    PLoS One. 2018;13:e0193925.
    PubMed     Text format     Abstract available

  39. JOHNSON M, Alsaleh N, Mendoza RP, Persaud I, et al
    Genomic and transcriptomic comparison of allergen and silver nanoparticle-induced mast cell degranulation reveals novel non-immunoglobulin E mediated mechanisms.
    PLoS One. 2018;13:e0193499.
    PubMed     Text format     Abstract available

  40. DAANE KM, Middleton MC, Sforza RFH, Kamps-Hughes N, et al
    Determining the geographic origin of invasive populations of the mealybug Planococcus ficus based on molecular genetic analysis.
    PLoS One. 2018;13:e0193852.
    PubMed     Text format     Abstract available

  41. BARTOSOVA-SOJKOVA P, Lovy A, Reed CC, Lisnerova M, et al
    Life in a rock pool: Radiation and population genetics of myxozoan parasites in hosts inhabiting restricted spaces.
    PLoS One. 2018;13:e0194042.
    PubMed     Text format     Abstract available

  42. KIM K, Jung J, Caetano-Anolles K, Sung S, et al
    Artificial selection increased body weight but induced increase of runs of homozygosity in Hanwoo cattle.
    PLoS One. 2018;13:e0193701.
    PubMed     Text format     Abstract available

  43. ZHANG Z, Du H, Bai L, Yang C, et al
    Whole genome bisulfite sequencing reveals unique adaptations to high-altitude environments in Tibetan chickens.
    PLoS One. 2018;13:e0193597.
    PubMed     Text format     Abstract available


    Proc Natl Acad Sci U S A

  44. BERER K, Gerdes LA, Cekanaviciute E, Jia X, et al
    Gut microbiota from multiple sclerosis patients enables spontaneous autoimmune encephalomyelitis in mice.
    Proc Natl Acad Sci U S A. 2017 Sep 11. pii: 201711233.
    PubMed     Text format     Abstract available

  45. STRAUSS L, Stegger M, Akpaka PE, Alabi A, et al
    Origin, evolution, and global transmission of community-acquired Staphylococcus aureus ST8.
    Proc Natl Acad Sci U S A. 2017 Nov 20. pii: 201702472.
    PubMed     Text format     Abstract available


    Science

  46. PHILLIPS KA, Trosman JR, Deverka PA, Quinn B, et al
    Insurance coverage for genomic tests.
    Science. 2018;360:278-279.
    PubMed     Text format    

  47. BARDILL J, Bader AC, Garrison NA, Bolnick DA, et al
    Advancing the ethics of paleogenomics.
    Science. 2018;360:384-385.
    PubMed     Text format    


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