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03.08.2020

2 Am J Hum Genet
1 PLoS Biol
1 PLoS Comput Biol
13 PLoS Genet
15 PLoS One
7 Proc Natl Acad Sci U S A


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Single Articles


    Am J Hum Genet

  1. VITSIOS D, Petrovski S
    Mantis-ml: Disease-Agnostic Gene Prioritization from High-Throughput Genomic Screens by Stochastic Semi-supervised Learning.
    Am J Hum Genet. 2020;106:659-678.
    PubMed         Abstract available

  2. DEBOEVER C, Tanigawa Y, Aguirre M, McInnes G, et al
    Assessing Digital Phenotyping to Enhance Genetic Studies of Human Diseases.
    Am J Hum Genet. 2020;106:611-622.
    PubMed         Abstract available


    PLoS Biol

  3. WATSA M, Erkenswick GA, Pomerantz A, Prost S, et al
    Portable sequencing as a teaching tool in conservation and biodiversity research.
    PLoS Biol. 2020;18:e3000667.
    PubMed         Abstract available


    PLoS Comput Biol

  4. BRUCKER A, Lu W, Marceau West R, Yu QY, et al
    Association test using Copy Number Profile Curves (CONCUR) enhances power in rare copy number variant analysis.
    PLoS Comput Biol. 2020;16:e1007797.
    PubMed         Abstract available


    PLoS Genet

  5. BRUDERS R, Van Hollebeke H, Osborne EJ, Kronenberg Z, et al
    A copy number variant is associated with a spectrum of pigmentation patterns in the rock pigeon (Columba livia).
    PLoS Genet. 2020;16:e1008274.
    PubMed         Abstract available

  6. HOLLAND D, Frei O, Desikan R, Fan CC, et al
    Beyond SNP heritability: Polygenicity and discoverability of phenotypes estimated with a univariate Gaussian mixture model.
    PLoS Genet. 2020;16:e1008612.
    PubMed         Abstract available

  7. CHEN Q, Samayoa LF, Yang CJ, Bradbury PJ, et al
    The genetic architecture of the maize progenitor, teosinte, and how it was altered during maize domestication.
    PLoS Genet. 2020;16:e1008791.
    PubMed         Abstract available

  8. FAN J, Hu J, Xue C, Zhang H, et al
    ASEP: Gene-based detection of allele-specific expression across individuals in a population by RNA sequencing.
    PLoS Genet. 2020;16:e1008786.
    PubMed         Abstract available

  9. BRASO-VIVES M, Povolotskaya IS, Hartasanchez DA, Farre X, et al
    Copy number variants and fixed duplications among 198 rhesus macaques (Macaca mulatta).
    PLoS Genet. 2020;16:e1008742.
    PubMed         Abstract available

  10. NELSON D, Kelleher J, Ragsdale AP, Moreau C, et al
    Accounting for long-range correlations in genome-wide simulations of large cohorts.
    PLoS Genet. 2020;16:e1008619.
    PubMed         Abstract available

  11. TANIGAWA Y, Wainberg M, Karjalainen J, Kiiskinen T, et al
    Rare protein-altering variants in ANGPTL7 lower intraocular pressure and protect against glaucoma.
    PLoS Genet. 2020;16:e1008682.
    PubMed         Abstract available

  12. BHATNAGAR SR, Yang Y, Lu T, Schurr E, et al
    Simultaneous SNP selection and adjustment for population structure in high dimensional prediction models.
    PLoS Genet. 2020;16:e1008766.
    PubMed         Abstract available

  13. NESPOLO RF, Villarroel CA, Oporto CI, Tapia SM, et al
    An Out-of-Patagonia migration explains the worldwide diversity and distribution of Saccharomyces eubayanus lineages.
    PLoS Genet. 2020;16:e1008777.
    PubMed         Abstract available

  14. NATRI HM, Bobowik KS, Kusuma P, Crenna Darusallam C, et al
    Genome-wide DNA methylation and gene expression patterns reflect genetic ancestry and environmental differences across the Indonesian archipelago.
    PLoS Genet. 2020;16:e1008749.
    PubMed         Abstract available

  15. ROSS C, Szczepanek K, Lee M, Yang H, et al
    The genomic landscape of metastasis in treatment-naive breast cancer models.
    PLoS Genet. 2020;16:e1008743.
    PubMed         Abstract available

  16. HUBER CD, Kim BY, Lohmueller KE
    Population genetic models of GERP scores suggest pervasive turnover of constrained sites across mammalian evolution.
    PLoS Genet. 2020;16:e1008827.
    PubMed         Abstract available

  17. AGRAWAL A, Chiu AM, Le M, Halperin E, et al
    Scalable probabilistic PCA for large-scale genetic variation data.
    PLoS Genet. 2020;16:e1008773.
    PubMed         Abstract available


    PLoS One

  18. DAEMI-SAEIDABAD M, Shojaeiyan A, Vivian-Smith A, Stenoien HK, et al
    The taxonomic significance of ddRADseq based microsatellite markers in the closely related species of Heracleum (Apiaceae).
    PLoS One. 2020;15:e0232471.
    PubMed         Abstract available

  19. MELO DCM, Lira SMA, Moreira APB, Freitas L, et al
    Genetic diversity and connectivity of Flaccisagitta enflata (Chaetognatha: Sagittidae) in the tropical Atlantic ocean (northeastern Brazil).
    PLoS One. 2020;15:e0231574.
    PubMed         Abstract available

  20. LI J, Li J, Zhao WG, Sun HD, et al
    Comprehensive proteomics and functional annotation of mouse brown adipose tissue.
    PLoS One. 2020;15:e0232084.
    PubMed         Abstract available

  21. RINALDI J, Sokol ES, Hartmaier RJ, Trabucco SE, et al
    The genomic landscape of metastatic breast cancer: Insights from 11,000 tumors.
    PLoS One. 2020;15:e0231999.
    PubMed         Abstract available

  22. WOOD DA, Rose JP, Halstead BJ, Stoelting RE, et al
    Combining genetic and demographic monitoring better informs conservation of an endangered urban snake.
    PLoS One. 2020;15:e0231744.
    PubMed         Abstract available

  23. FANG H, Liu H, Ma R, Liu Y, et al
    Genome-wide assessment of population structure and genetic diversity of Chinese Lou onion using specific length amplified fragment (SLAF) sequencing.
    PLoS One. 2020;15:e0231753.
    PubMed         Abstract available

  24. CAI L, Tong J, Zhang Z, Zhang Y, et al
    Staphylococcus aureus-induced proteomic changes in the mammary tissue of rats: A TMT-based study.
    PLoS One. 2020;15:e0231168.
    PubMed         Abstract available

  25. HONG JY, Kim JH
    PG-path: Modeling and personalizing pharmacogenomics-based pathways.
    PLoS One. 2020;15:e0230950.
    PubMed         Abstract available

  26. BAI H, Sun K, Wu JH, Zhong ZH, et al
    Proteomic and metabolomic characterization of cardiac tissue in acute myocardial ischemia injury rats.
    PLoS One. 2020;15:e0231797.
    PubMed         Abstract available

  27. LARUPA SANTOS J, Rodriguez I, S Olesen M, Hjorth Bentzen B, et al
    Investigating gene-microRNA networks in atrial fibrillation patients with mitral valve regurgitation.
    PLoS One. 2020;15:e0232719.
    PubMed         Abstract available

  28. STRIJK JS, Binh HT, Ngoc NV, Pereira JT, et al
    Museomics for reconstructing historical floristic exchanges: Divergence of stone oaks across Wallacea.
    PLoS One. 2020;15:e0232936.
    PubMed         Abstract available

  29. ROJAS LA, Scully E, Enders L, Timm A, et al
    Comparative transcriptomics of Diuraphis noxia and Schizaphis graminum fed wheat plants containing different aphid-resistance genes.
    PLoS One. 2020;15:e0233077.
    PubMed         Abstract available

  30. AGARWAL A, Park S, Ha S, Kwon JS, et al
    Quantitative mass spectrometric analysis of the mouse cerebral cortex after ischemic stroke.
    PLoS One. 2020;15:e0231978.
    PubMed         Abstract available

  31. THORNE MAS, Britovsek NK, Hawkins L, Lilley KS, et al
    Proteomics of intracellular freezing survival.
    PLoS One. 2020;15:e0233048.
    PubMed         Abstract available

  32. KREDENS KV, Martins JV, Dordal OB, Ferrandin M, et al
    Vertical lossless genomic data compression tools for assembled genomes: A systematic literature review.
    PLoS One. 2020;15:e0232942.
    PubMed         Abstract available


    Proc Natl Acad Sci U S A

  33. LONG JZ
    Proteomics illuminates fat as key tissue in aging.
    Proc Natl Acad Sci U S A. 2020;117:10111-10112.
    PubMed        

  34. YU Q, Xiao H, Jedrychowski MP, Schweppe DK, et al
    Sample multiplexing for targeted pathway proteomics in aging mice.
    Proc Natl Acad Sci U S A. 2020;117:9723-9732.
    PubMed         Abstract available

  35. LEE S, Hu Y, Loo SK, Tan Y, et al
    Landscape analysis of adjacent gene rearrangements reveals BCL2L14-ETV6 gene fusions in more aggressive triple-negative breast cancer.
    Proc Natl Acad Sci U S A. 2020 Apr 22. pii: 1921333117.
    PubMed         Abstract available

  36. CAMMACK AJ, Moudgil A, Chen J, Vasek MJ, et al
    A viral toolkit for recording transcription factor-DNA interactions in live mouse tissues.
    Proc Natl Acad Sci U S A. 2020;117:10003-10014.
    PubMed         Abstract available

  37. CHERRY TJ, Yang MG, Harmin DA, Tao P, et al
    Mapping the cis-regulatory architecture of the human retina reveals noncoding genetic variation in disease.
    Proc Natl Acad Sci U S A. 2020;117:9001-9012.
    PubMed         Abstract available

  38. OBERHOFER G, Ivy T, Hay BA
    Gene drive and resilience through renewal with next generation Cleave and Rescue selfish genetic elements.
    Proc Natl Acad Sci U S A. 2020;117:9013-9021.
    PubMed         Abstract available

  39. PARDO J, Man Wai C, Chay H, Madden CF, et al
    Intertwined signatures of desiccation and drought tolerance in grasses.
    Proc Natl Acad Sci U S A. 2020;117:10079-10088.
    PubMed         Abstract available


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