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  Genetics

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Articles published in PLoS Genet

Retrieve available abstracts of 67 articles:
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Single Articles


    April 2025
  1. EBDON S, Laetsch DR, Vila R, Baird SJE, et al
    Genomic regions of current low hybridisation mark long-term barriers to gene flow in scarce swallowtail butterflies.
    PLoS Genet. 2025;21:e1011655.
    PubMed     Abstract available


  2. CAI W, Cole JB, Goddard ME, Li J, et al
    Mammary gland multi-omics data reveals new genetic insights into milk production traits in dairy cattle.
    PLoS Genet. 2025;21:e1011675.
    PubMed     Abstract available


  3. HEY J, Pavinato VAC
    Isolating selective from non-selective forces using site frequency ratios.
    PLoS Genet. 2025;21:e1011427.
    PubMed     Abstract available


    March 2025
  4. GETZ LJ, Robinson OS, Thomas NA
    Functional genomics of chitin degradation by Vibrio parahaemolyticus reveals finely integrated metabolic contributions to support environmental fitness.
    PLoS Genet. 2025;21:e1011370.
    PubMed     Abstract available


  5. RAGSDALE AP
    Archaic introgression and the distribution of shared variation under stabilizing selection.
    PLoS Genet. 2025;21:e1011623.
    PubMed     Abstract available


  6. LECOQUIERRE F, Drouot N, Coutant S, Quenez O, et al
    Parental germline mosaicism in genome-wide phased de novo variants: Recurrence risk assessment and implications for precision genetic counselling.
    PLoS Genet. 2025;21:e1011651.
    PubMed     Abstract available


  7. FARNITANO MC, Karoly K, Sweigart AL
    Fluctuating reproductive isolation and stable ancestry structure in a fine-scaled mosaic of hybridizing Mimulus monkeyflowers.
    PLoS Genet. 2025;21:e1011624.
    PubMed     Abstract available


  8. TRAN JS, Ward RD, Iruegas-Lopez R, Ebersberger I, et al
    Chemical genomics informs antibiotic and essential gene function in Acinetobacter baumannii.
    PLoS Genet. 2025;21:e1011642.
    PubMed     Abstract available


    January 2025
  9. HUANG Z, Kelleher J, Chan YB, Balding D, et al
    Estimating evolutionary and demographic parameters via ARG-derived IBD.
    PLoS Genet. 2025;21:e1011537.
    PubMed     Abstract available


    December 2024
  10. AMEZQUITA J, Desbois M, Opperman KJ, Pak JS, et al
    Integrin adhesome axis inhibits the RPM-1 ubiquitin ligase signaling hub to regulate growth cone and axon development.
    PLoS Genet. 2024;20:e1011496.
    PubMed     Abstract available


  11. OMKAR S, Mitchem MM, Hoskins JR, Shrader C, et al
    Acetylation of the yeast Hsp40 chaperone protein Ydj1 fine-tunes proteostasis and translational fidelity.
    PLoS Genet. 2024;20:e1011338.
    PubMed     Abstract available


  12. HASAN A, Whitlock MC
    FST and genetic diversity in an island model with background selection.
    PLoS Genet. 2024;20:e1011225.
    PubMed     Abstract available


  13. HAASL RJ, Payseur BA
    Fitness landscapes of human microsatellites.
    PLoS Genet. 2024;20:e1011524.
    PubMed     Abstract available


    November 2024
  14. XU Z, Wei P
    A novel statistical framework for meta-analysis of total mediation effect with high-dimensional omics mediators in large-scale genomic consortia.
    PLoS Genet. 2024;20:e1011483.
    PubMed     Abstract available


    October 2024
  15. SKIADAS P, Riera Vidal S, Dommisse J, Mendel MN, et al
    Pangenome graph analysis reveals extensive effector copy-number variation in spinach downy mildew.
    PLoS Genet. 2024;20:e1011452.
    PubMed     Abstract available


  16. FU S, Wheeler W, Wang X, Hua X, et al
    A comprehensive framework for trans-ancestry pathway analysis using GWAS summary data from diverse populations.
    PLoS Genet. 2024;20:e1011322.
    PubMed     Abstract available


    September 2024
  17. KYRIAZIS CC, Lohmueller KE
    Constraining models of dominance for nonsynonymous mutations in the human genome.
    PLoS Genet. 2024;20:e1011198.
    PubMed     Abstract available


    August 2024
  18. SHOGREN EH, Sardell JM, Muirhead CA, Marti E, et al
    Recent secondary contact, genome-wide admixture, and asymmetric introgression of neo-sex chromosomes between two Pacific island bird species.
    PLoS Genet. 2024;20:e1011360.
    PubMed     Abstract available


  19. CRONE B, Boyle AP
    Enhancing portability of trans-ancestral polygenic risk scores through tissue-specific functional genomic data integration.
    PLoS Genet. 2024;20:e1011356.
    PubMed     Abstract available


    July 2024
  20. RUEDA-M N, Pardo-Diaz C, Montejo-Kovacevich G, McMillan WO, et al
    Genomic evidence reveals three W-autosome fusions in Heliconius butterflies.
    PLoS Genet. 2024;20:e1011318.
    PubMed     Abstract available


  21. GUTIERREZ-GUERRERO YT, Phifer-Rixey M, Nachman MW
    Across two continents: The genomic basis of environmental adaptation in house mice (Mus musculus domesticus) from the Americas.
    PLoS Genet. 2024;20:e1011036.
    PubMed     Abstract available


  22. WERTENBROEK R, Hofmeister RJ, Xenarios I, Thoma Y, et al
    Improving population scale statistical phasing with whole-genome sequencing data.
    PLoS Genet. 2024;20:e1011092.
    PubMed     Abstract available


    June 2024
  23. DAVISON C, Tallman S, de Ste-Croix M, Antonio M, et al
    Long-term evolution of Streptococcus mitis and Streptococcus pneumoniae leads to higher genetic diversity within rather than between human populations.
    PLoS Genet. 2024;20:e1011317.
    PubMed     Abstract available


    April 2024
  24. CHO A, Lax G, Livingston SJ, Masukagami Y, et al
    Genomic analyses of Symbiomonas scintillans show no evidence for endosymbiotic bacteria but does reveal the presence of giant viruses.
    PLoS Genet. 2024;20:e1011218.
    PubMed     Abstract available


  25. DUMONT BL, Gatti DM, Ballinger MA, Lin D, et al
    Into the Wild: A novel wild-derived inbred strain resource expands the genomic and phenotypic diversity of laboratory mouse models.
    PLoS Genet. 2024;20:e1011228.
    PubMed     Abstract available


  26. GUNN S, Lunetta KL
    Correlation-based tests for the formal comparison of polygenic scores in multiple populations.
    PLoS Genet. 2024;20:e1011249.
    PubMed     Abstract available


  27. MOORE MP, Laager M, Ribeca P, Didelot X, et al
    KmerAperture: Retaining k-mer synteny for alignment-free extraction of core and accessory differences between bacterial genomes.
    PLoS Genet. 2024;20:e1011184.
    PubMed     Abstract available


    March 2024
  28. WARD CM, Onetto CA, Van Den Heuvel S, Cuijvers KM, et al
    Recombination, admixture and genome instability shape the genomic landscape of Saccharomyces cerevisiae derived from spontaneous grape ferments.
    PLoS Genet. 2024;20:e1011223.
    PubMed     Abstract available


  29. LUO Z, McTaggart A, Schwessinger B
    Genome biology and evolution of mating-type loci in four cereal rust fungi.
    PLoS Genet. 2024;20:e1011207.
    PubMed     Abstract available


    February 2024
  30. RIVAS-GONZALEZ I, Schierup MH, Wakeley J, Hobolth A, et al
    TRAILS: Tree reconstruction of ancestry using incomplete lineage sorting.
    PLoS Genet. 2024;20:e1010836.
    PubMed     Abstract available


  31. RAY DD, Flagel L, Schrider DR
    IntroUNET: Identifying introgressed alleles via semantic segmentation.
    PLoS Genet. 2024;20:e1010657.
    PubMed     Abstract available


    January 2024
  32. ZHANG QX, Liu T, Guo X, Zhen J, et al
    Searching across-cohort relatives in 54,092 GWAS samples via encrypted genotype regression.
    PLoS Genet. 2024;20:e1011037.
    PubMed     Abstract available


  33. LEWANSKI AL, Grundler MC, Bradburd GS
    The era of the ARG: An introduction to ancestral recombination graphs and their significance in empirical evolutionary genomics.
    PLoS Genet. 2024;20:e1011110.
    PubMed     Abstract available


    December 2023
  34. NOVAK LVF, Treitli SC, Pyrih J, Halakuc P, et al
    Genomics of Preaxostyla Flagellates Illuminates the Path Towards the Loss of Mitochondria.
    PLoS Genet. 2023;19:e1011050.
    PubMed     Abstract available


  35. KAWAI Y, Watanabe Y, Omae Y, Miyahara R, et al
    Exploring the genetic diversity of the Japanese population: Insights from a large-scale whole genome sequencing analysis.
    PLoS Genet. 2023;19:e1010625.
    PubMed     Abstract available


  36. LEGRAND C, Andriantsoa R, Lichter P, Raddatz G, et al
    Time-resolved, integrated analysis of clonally evolving genomes.
    PLoS Genet. 2023;19:e1011085.
    PubMed     Abstract available


  37. WANG D, Perera D, He J, Cao C, et al
    cLD: Rare-variant linkage disequilibrium between genomic regions identifies novel genomic interactions.
    PLoS Genet. 2023;19:e1011074.
    PubMed     Abstract available


  38. MUNASINGHE M, Read A, Stitzer MC, Song B, et al
    Combined analysis of transposable elements and structural variation in maize genomes reveals genome contraction outpaces expansion.
    PLoS Genet. 2023;19:e1011086.
    PubMed     Abstract available


    November 2023
  39. MO Z, Siepel A
    Domain-adaptive neural networks improve supervised machine learning based on simulated population genetic data.
    PLoS Genet. 2023;19:e1011032.
    PubMed     Abstract available


  40. MAROM R, Zhang B, Washington ME, Song IW, et al
    Dominant negative variants in KIF5B cause osteogenesis imperfecta via down regulation of mTOR signaling.
    PLoS Genet. 2023;19:e1011005.
    PubMed     Abstract available


  41. AYALA NM, Genetti M, Corbett-Detig R
    Inferring multi-locus selection in admixed populations.
    PLoS Genet. 2023;19:e1011062.
    PubMed     Abstract available


  42. GOUDET J, Weir BS
    An allele-sharing, moment-based estimator of global, population-specific and population-pair FST under a general model of population structure.
    PLoS Genet. 2023;19:e1010871.
    PubMed     Abstract available


  43. MICHEL JC, Grivette MMB, Harshfield AT, Huynh L, et al
    Electrical synapse structure requires distinct isoforms of a postsynaptic scaffold.
    PLoS Genet. 2023;19:e1011045.
    PubMed     Abstract available


    October 2023
  44. MOCCI E, Ward K, Perry JA, Starkweather A, et al
    Genome wide association joint analysis reveals 99 risk loci for pain susceptibility and pleiotropic relationships with psychiatric, metabolic, and immunological traits.
    PLoS Genet. 2023;19:e1010977.
    PubMed     Abstract available


  45. RADULESCU E, Chen Q, Pergola G, Di Carlo P, et al
    Investigating trait variability of gene co-expression network architecture in brain by controlling for genomic risk of schizophrenia.
    PLoS Genet. 2023;19:e1010989.
    PubMed     Abstract available


  46. AUBIN E, Llauro C, Garrigue J, Mirouze M, et al
    Genome-wide analysis of horizontal transfer in non-model wild species from a natural ecosystem reveals new insights into genetic exchange in plants.
    PLoS Genet. 2023;19:e1010964.
    PubMed     Abstract available


  47. CAURET CMS, Jordan DC, Kukoly LM, Burton SR, et al
    Functional dissection and assembly of a small, newly evolved, W chromosome-specific genomic region of the African clawed frog Xenopus laevis.
    PLoS Genet. 2023;19:e1010990.
    PubMed     Abstract available


  48. WULFRIDGE P, Davidovich A, Salvador AC, Manno GC, et al
    Precision pharmacological reversal of strain-specific diet-induced metabolic syndrome in mice informed by epigenetic and transcriptional regulation.
    PLoS Genet. 2023;19:e1010997.
    PubMed     Abstract available


    September 2023
  49. WEN X, Feng K, Qin J, Wei P, et al
    A detoxification pathway initiated by a nuclear receptor TcHR96h in Tetranychus cinnabarinus (Boisduval).
    PLoS Genet. 2023;19:e1010911.
    PubMed     Abstract available


  50. ROCA-UMBERT A, Garcia-Calleja J, Vogel-Gonzalez M, Fierro-Villegas A, et al
    Human genetic adaptation related to cellular zinc homeostasis.
    PLoS Genet. 2023;19:e1010950.
    PubMed     Abstract available


    August 2023
  51. TETERINA AA, Willis JH, Lukac M, Jovelin R, et al
    Genomic diversity landscapes in outcrossing and selfing Caenorhabditis nematodes.
    PLoS Genet. 2023;19:e1010879.
    PubMed     Abstract available


    July 2023
  52. WAGNER ER, Nightingale NM, Jen A, Overmyer KA, et al
    PKA regulatory subunit Bcy1 couples growth, lipid metabolism, and fermentation during anaerobic xylose growth in Saccharomyces cerevisiae.
    PLoS Genet. 2023;19:e1010593.
    PubMed     Abstract available


    June 2023
  53. NAKANO S, Kashio S, Nishimura K, Takeishi A, et al
    Damage sensing mediated by serine proteases Hayan and Persephone for Toll pathway activation in apoptosis-deficient flies.
    PLoS Genet. 2023;19:e1010761.
    PubMed     Abstract available


  54. BRISEVAC D, Prakash C, Kaiser TS
    Genetic analysis of a phenotypic loss in the mechanosensory entrainment of a circalunar clock.
    PLoS Genet. 2023;19:e1010763.
    PubMed     Abstract available


  55. SUN B, Kim H, Mello CC, Priess JR, et al
    The CERV protein of Cer1, a C. elegans LTR retrotransposon, is required for nuclear export of viral genomic RNA and can form giant nuclear rods.
    PLoS Genet. 2023;19:e1010804.
    PubMed     Abstract available


  56. VEDANAYAGAM J, Lin CJ, Papareddy R, Nodine M, et al
    Regulatory logic of endogenous RNAi in silencing de novo genomic conflicts.
    PLoS Genet. 2023;19:e1010787.
    PubMed     Abstract available


  57. MIAO Y, Zhao Y, Wan S, Mei Q, et al
    Integrated analysis of genome-wide association studies and 3D epigenomic characteristics reveal the BMP2 gene regulating loin muscle depth in Yorkshire pigs.
    PLoS Genet. 2023;19:e1010820.
    PubMed     Abstract available


  58. WANG N, Cao S, Liu Z, Xiao H, et al
    Genomic conservation of crop wild relatives: A case study of citrus.
    PLoS Genet. 2023;19:e1010811.
    PubMed     Abstract available


    May 2023
  59. PISUPATI R, Nizhynska V, Molla Morales A, Nordborg M, et al
    On the causes of gene-body methylation variation in Arabidopsis thaliana.
    PLoS Genet. 2023;19:e1010728.
    PubMed     Abstract available


  60. JIANG MZ, Aguet F, Ardlie K, Chen J, et al
    Canonical correlation analysis for multi-omics: Application to cross-cohort analysis.
    PLoS Genet. 2023;19:e1010517.
    PubMed     Abstract available


    April 2023
  61. KOPPES EA, Johnson MA, Moresco JJ, Luppi P, et al
    Insulin secretion deficits in a Prader-Willi syndrome beta-cell model are associated with a concerted downregulation of multiple endoplasmic reticulum chaperones.
    PLoS Genet. 2023;19:e1010710.
    PubMed     Abstract available


  62. BRUAL T, Effantin G, Baltenneck J, Attaiech L, et al
    A natural single nucleotide mutation in the small regulatory RNA ArcZ of Dickeya solani switches off the antimicrobial activities against yeast and bacteria.
    PLoS Genet. 2023;19:e1010725.
    PubMed     Abstract available


    March 2023
  63. SLABODNICK MM, Tintori SC, Prakash M, Zhang P, et al
    Zyxin contributes to coupling between cell junctions and contractile actomyosin networks during apical constriction.
    PLoS Genet. 2023;19:e1010319.
    PubMed     Abstract available


  64. ONETTO CA, Kutyna DR, Kolouchova R, McCarthy J, et al
    SO2 and copper tolerance exhibit an evolutionary trade-off in Saccharomyces cerevisiae.
    PLoS Genet. 2023;19:e1010692.
    PubMed     Abstract available


  65. KRISHNAN S, DeMaere MZ, Beck D, Ostrowski M, et al
    Rhometa: Population recombination rate estimation from metagenomic read datasets.
    PLoS Genet. 2023;19:e1010683.
    PubMed     Abstract available


    February 2023
  66. XU L, Wang X, Lu X, Liang F, et al
    Long-read sequencing identifies novel structural variations in colorectal cancer.
    PLoS Genet. 2023;19:e1010514.
    PubMed     Abstract available


  67. NIELSEN SV, Vaughn AH, Leppala K, Landis MJ, et al
    Bayesian inference of admixture graphs on Native American and Arctic populations.
    PLoS Genet. 2023;19:e1010410.
    PubMed     Abstract available


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