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Articles published in PLoS Genet

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Single Articles


    November 2022
  1. GAUR D, Kumar N, Ghosh A, Singh P, et al
    Ydj1 interaction at nucleotide-binding-domain of yeast Ssa1 impacts Hsp90 collaboration and client maturation.
    PLoS Genet. 2022;18:e1010442.
    PubMed     Abstract available


  2. ABRAHAM A, LaBella AL, Capra JA, Rokas A, et al
    Mosaic patterns of selection in genomic regions associated with diverse human traits.
    PLoS Genet. 2022;18:e1010494.
    PubMed     Abstract available


    October 2022
  3. PORTER AF, Sherry N, Andersson P, Johnson SA, et al
    New rules for genomics-informed COVID-19 responses-Lessons learned from the first waves of the Omicron variant in Australia.
    PLoS Genet. 2022;18:e1010415.
    PubMed    


  4. FINN EH, Misteli T
    Nuclear position modulates long-range chromatin interactions.
    PLoS Genet. 2022;18:e1010451.
    PubMed     Abstract available


  5. REHN J, Mayoh C, Heatley SL, McClure BJ, et al
    RaScALL: Rapid (Ra) screening (Sc) of RNA-seq data for prognostically significant genomic alterations in acute lymphoblastic leukaemia (ALL).
    PLoS Genet. 2022;18:e1010300.
    PubMed     Abstract available


  6. XIA X, Zhang Y, Sun R, Wei Y, et al
    A Prism Vote method for individualized risk prediction of traits in genotype data of Multi-population.
    PLoS Genet. 2022;18:e1010443.
    PubMed     Abstract available


    September 2022
  7. PARANJPE MD, Chaffin M, Zahid S, Ritchie S, et al
    Neurocognitive trajectory and proteomic signature of inherited risk for Alzheimer's disease.
    PLoS Genet. 2022;18:e1010294.
    PubMed     Abstract available


  8. SACHDEVA H
    Reproductive isolation via polygenic local adaptation in sub-divided populations: Effect of linkage disequilibria and drift.
    PLoS Genet. 2022;18:e1010297.
    PubMed     Abstract available


  9. BOCHER O, Ludwig TE, Oglobinsky MS, Marenne G, et al
    Testing for association with rare variants in the coding and non-coding genome: RAVA-FIRST, a new approach based on CADD deleteriousness score.
    PLoS Genet. 2022;18:e1009923.
    PubMed     Abstract available


    August 2022
  10. GILLESPIE NA, Gentry AE, Kirkpatrick RM, Reynolds CA, et al
    Determining the stability of genome-wide factors in BMI between ages 40 to 69 years.
    PLoS Genet. 2022;18:e1010303.
    PubMed     Abstract available


    July 2022
  11. XU S, Li G, Ye X, Chen D, et al
    HAP40 is a conserved central regulator of Huntingtin and a potential modulator of Huntington's disease pathogenesis.
    PLoS Genet. 2022;18:e1010302.
    PubMed     Abstract available


  12. LIANG M, Shishkin M, Mikhailova A, Shchur V, et al
    Estimating the timing of multiple admixture events using 3-locus linkage disequilibrium.
    PLoS Genet. 2022;18:e1010281.
    PubMed     Abstract available


    June 2022
  13. SANCHEZ VC, Yang HH, Craig-Lucas A, Dubois W, et al
    Host CLIC4 expression in the tumor microenvironment is essential for breast cancer metastatic competence.
    PLoS Genet. 2022;18:e1010271.
    PubMed     Abstract available


  14. ANDERSON H, Davison S, Lytle KM, Honkanen L, et al
    Genetic epidemiology of blood type, disease and trait variants, and genome-wide genetic diversity in over 11,000 domestic cats.
    PLoS Genet. 2022;18:e1009804.
    PubMed     Abstract available


  15. BORDENSTEIN SR, Bordenstein SR
    Widespread phages of endosymbionts: Phage WO genomics and the proposed taxonomic classification of Symbioviridae.
    PLoS Genet. 2022;18:e1010227.
    PubMed     Abstract available


  16. TOURNEBIZE R, Chu G, Moorjani P
    Reconstructing the history of founder events using genome-wide patterns of allele sharing across individuals.
    PLoS Genet. 2022;18:e1010243.
    PubMed     Abstract available


  17. BARNADA SM, Isopi A, Tejada-Martinez D, Goubert C, et al
    Genomic features underlie the co-option of SVA transposons as cis-regulatory elements in human pluripotent stem cells.
    PLoS Genet. 2022;18:e1010225.
    PubMed     Abstract available


    May 2022
  18. SMITH TE, Li Y, Perreau J, Moran NA, et al
    Elucidation of host and symbiont contributions to peptidoglycan metabolism based on comparative genomics of eight aphid subfamilies and their Buchnera.
    PLoS Genet. 2022;18:e1010195.
    PubMed     Abstract available


  19. GIBSON G
    Perspectives on rigor and reproducibility in single cell genomics.
    PLoS Genet. 2022;18:e1010210.
    PubMed    


    April 2022
  20. OZIRMAK LERMI N, Gray SB, Bowen CM, Reyes-Uribe L, et al
    Comparative molecular genomic analyses of a spontaneous rhesus macaque model of mismatch repair-deficient colorectal cancer.
    PLoS Genet. 2022;18:e1010163.
    PubMed     Abstract available


  21. ONETTO CA, Sosnowski MR, Van Den Heuvel S, Borneman AR, et al
    Population genomics of the grapevine pathogen Eutypa lata reveals evidence for population expansion and intraspecific differences in secondary metabolite gene clusters.
    PLoS Genet. 2022;18:e1010153.
    PubMed     Abstract available


  22. DESBOIS M, Opperman KJ, Amezquita J, Gaglio G, et al
    Ubiquitin ligase activity inhibits Cdk5 to control axon termination.
    PLoS Genet. 2022;18:e1010152.
    PubMed     Abstract available


  23. DEGIORGIO M, Szpiech ZA
    A spatially aware likelihood test to detect sweeps from haplotype distributions.
    PLoS Genet. 2022;18:e1010134.
    PubMed     Abstract available


  24. BARRIOS N, Gonzalez-Lagos C, Dreger DL, Parker HG, et al
    Patagonian sheepdog: Genomic analyses trace the footprints of extinct UK herding dogs to South America.
    PLoS Genet. 2022;18:e1010160.
    PubMed     Abstract available


  25. WANG C, Chen L, Chen Y, Jia W, et al
    Abnormal global alternative RNA splicing in COVID-19 patients.
    PLoS Genet. 2022;18:e1010137.
    PubMed     Abstract available


    March 2022
  26. CILLINGOVA A, Toth R, Mojakova A, Zeman I, et al
    Transcriptome and proteome profiling reveals complex adaptations of Candida parapsilosis cells assimilating hydroxyaromatic carbon sources.
    PLoS Genet. 2022;18:e1009815.
    PubMed     Abstract available


  27. SATI S, Jones P, Kim HS, Zhou LA, et al
    HiCuT: An efficient and low input method to identify protein-directed chromatin interactions.
    PLoS Genet. 2022;18:e1010121.
    PubMed     Abstract available


  28. KALMAR L, Gupta S, Kean IRL, Ba X, et al
    HAM-ART: An optimised culture-free Hi-C metagenomics pipeline for tracking antimicrobial resistance genes in complex microbial communities.
    PLoS Genet. 2022;18:e1009776.
    PubMed     Abstract available


  29. YANG N, Srivastav SP, Rahman R, Ma Q, et al
    Transposable element landscapes in aging Drosophila.
    PLoS Genet. 2022;18:e1010024.
    PubMed     Abstract available


    February 2022
  30. CHANGMAI P, Jaisamut K, Kampuansai J, Kutanan W, et al
    Indian genetic heritage in Southeast Asian populations.
    PLoS Genet. 2022;18:e1010036.
    PubMed     Abstract available


  31. CAVEDON M, vonHoldt B, Hebblewhite M, Hegel T, et al
    Genomic legacy of migration in endangered caribou.
    PLoS Genet. 2022;18:e1009974.
    PubMed     Abstract available


  32. HERNANDEZ-CASTRO LE, Villacis AG, Jacobs A, Cheaib B, et al
    Population genomics and geographic dispersal in Chagas disease vectors: Landscape drivers and evidence of possible adaptation to the domestic setting.
    PLoS Genet. 2022;18:e1010019.
    PubMed     Abstract available


  33. JOHRI P, Stephan W, Jensen JD
    Soft selective sweeps: Addressing new definitions, evaluating competing models, and interpreting empirical outliers.
    PLoS Genet. 2022;18:e1010022.
    PubMed     Abstract available


  34. CUEVAS A, Eroukhmanoff F, Ravinet M, Saetre GP, et al
    Predictors of genomic differentiation within a hybrid taxon.
    PLoS Genet. 2022;18:e1010027.
    PubMed     Abstract available


    January 2022
  35. HOLLOMON JM, Liu Z, Rusin SF, Jenkins NP, et al
    The Candida albicans Cdk8-dependent phosphoproteome reveals repression of hyphal growth through a Flo8-dependent pathway.
    PLoS Genet. 2022;18:e1009622.
    PubMed     Abstract available


  36. ALTINOGLU I, Abriat G, Carreaux A, Torres-Sanchez L, et al
    Analysis of HubP-dependent cell pole protein targeting in Vibrio cholerae uncovers novel motility regulators.
    PLoS Genet. 2022;18:e1009991.
    PubMed     Abstract available


  37. HAN J, Munro JE, Kocoski A, Barry AE, et al
    Population-level genome-wide STR discovery and validation for population structure and genetic diversity assessment of Plasmodium species.
    PLoS Genet. 2022;18:e1009604.
    PubMed     Abstract available


  38. TORRES-CAMPANA D, Horard B, Denaud S, Benoit G, et al
    Three classes of epigenomic regulators converge to hyperactivate the essential maternal gene deadhead within a heterochromatin mini-domain.
    PLoS Genet. 2022;18:e1009615.
    PubMed     Abstract available


    December 2021
  39. BROWN TS, Arogbokun O, Buckee CO, Chang HH, et al
    Distinguishing gene flow between malaria parasite populations.
    PLoS Genet. 2021;17:e1009335.
    PubMed     Abstract available


  40. POOK T, Nemri A, Gonzalez Segovia EG, Valle Torres D, et al
    Increasing calling accuracy, coverage, and read-depth in sequence data by the use of haplotype blocks.
    PLoS Genet. 2021;17:e1009944.
    PubMed     Abstract available


    October 2021
  41. PERRIN HJ, Currin KW, Vadlamudi S, Pandey GK, et al
    Chromatin accessibility and gene expression during adipocyte differentiation identify context-dependent effects at cardiometabolic GWAS loci.
    PLoS Genet. 2021;17:e1009865.
    PubMed     Abstract available


  42. HILL V, Akarsu H, Barbarroja RS, Cippa VL, et al
    Minimalistic mycoplasmas harbor different functional toxin-antitoxin systems.
    PLoS Genet. 2021;17:e1009365.
    PubMed     Abstract available


  43. LEEB T
    Domestic animal genetics.
    PLoS Genet. 2021;17:e1009831.
    PubMed    


  44. ARNING N, Sheppard SK, Bayliss S, Clifton DA, et al
    Machine learning to predict the source of campylobacteriosis using whole genome data.
    PLoS Genet. 2021;17:e1009436.
    PubMed     Abstract available


  45. STITZER MC, Anderson SN, Springer NM, Ross-Ibarra J, et al
    The genomic ecosystem of transposable elements in maize.
    PLoS Genet. 2021;17:e1009768.
    PubMed     Abstract available


  46. GIRI A, Khaipho-Burch M, Buckler ES, Ramstein GP, et al
    Haplotype associated RNA expression (HARE) improves prediction of complex traits in maize.
    PLoS Genet. 2021;17:e1009568.
    PubMed     Abstract available


    September 2021
  47. BRAULT V, Nguyen TL, Flores-Gutierrez J, Iacono G, et al
    Dyrk1a gene dosage in glutamatergic neurons has key effects in cognitive deficits observed in mouse models of MRD7 and Down syndrome.
    PLoS Genet. 2021;17:e1009777.
    PubMed     Abstract available


  48. BOWDEN J, Pilling LC, Turkmen D, Kuo CL, et al
    The Triangulation WIthin a STudy (TWIST) framework for causal inference within pharmacogenetic research.
    PLoS Genet. 2021;17:e1009783.
    PubMed     Abstract available


  49. CLAERHOUT S, Verstraete P, Warnez L, Vanpaemel S, et al
    CSYseq: The first Y-chromosome sequencing tool typing a large number of Y-SNPs and Y-STRs to unravel worldwide human population genetics.
    PLoS Genet. 2021;17:e1009758.
    PubMed     Abstract available


    August 2021
  50. DURAND R, Deschenes F, Burrus V
    Genomic islands targeting dusA in Vibrio species are distantly related to Salmonella Genomic Island 1 and mobilizable by IncC conjugative plasmids.
    PLoS Genet. 2021;17:e1009669.
    PubMed     Abstract available


  51. NITA A, Matsumoto A, Tang R, Shiraishi C, et al
    A ubiquitin-like protein encoded by the "noncoding" RNA TINCR promotes keratinocyte proliferation and wound healing.
    PLoS Genet. 2021;17:e1009686.
    PubMed     Abstract available


  52. ELLIS DA, Reyes-Martin F, Rodriguez-Lopez M, Cotobal C, et al
    R-loops and regulatory changes in chronologically ageing fission yeast cells drive non-random patterns of genome rearrangements.
    PLoS Genet. 2021;17:e1009784.
    PubMed     Abstract available


  53. SCHOTANUS K, Yadav V, Heitman J
    Epigenetic dynamics of centromeres and neocentromeres in Cryptococcus deuterogattii.
    PLoS Genet. 2021;17:e1009743.
    PubMed     Abstract available


  54. VAN DAM MH, Cabras AA, Henderson JB, Rominger AJ, et al
    The Easter Egg Weevil (Pachyrhynchus) genome reveals syntenic patterns in Coleoptera across 200 million years of evolution.
    PLoS Genet. 2021;17:e1009745.
    PubMed     Abstract available


  55. FELDMANN MJ, Piepho HP, Bridges WC, Knapp SJ, et al
    Average semivariance yields accurate estimates of the fraction of marker-associated genetic variance and heritability in complex trait analyses.
    PLoS Genet. 2021;17:e1009762.
    PubMed     Abstract available


  56. DEMETCI P, Cheng W, Darnell G, Zhou X, et al
    Multi-scale inference of genetic trait architecture using biologically annotated neural networks.
    PLoS Genet. 2021;17:e1009754.
    PubMed     Abstract available


    July 2021
  57. MACK KL, Jaggard JB, Persons JL, Roback EY, et al
    Repeated evolution of circadian clock dysregulation in cavefish populations.
    PLoS Genet. 2021;17:e1009642.
    PubMed     Abstract available


  58. AUDAIN E, Wilsdon A, Breckpot J, Izarzugaza JMG, et al
    Integrative analysis of genomic variants reveals new associations of candidate haploinsufficient genes with congenital heart disease.
    PLoS Genet. 2021;17:e1009679.
    PubMed     Abstract available


  59. WILLEMIN A, Lopez-Delisle L, Bolt CC, Gadolini ML, et al
    Induction of a chromatin boundary in vivo upon insertion of a TAD border.
    PLoS Genet. 2021;17:e1009691.
    PubMed     Abstract available


  60. ROWAN TN, Durbin HJ, Seabury CM, Schnabel RD, et al
    Powerful detection of polygenic selection and evidence of environmental adaptation in US beef cattle.
    PLoS Genet. 2021;17:e1009652.
    PubMed     Abstract available


  61. FRANCOIS O, Gain C
    A spectral theory for Wright's inbreeding coefficients and related quantities.
    PLoS Genet. 2021;17:e1009665.
    PubMed     Abstract available


  62. CHEN PB, Flint J
    What connectomics can learn from genomics.
    PLoS Genet. 2021;17:e1009692.
    PubMed    


  63. WEIN T, Wang Y, Barz M, Stucker FT, et al
    Essential gene acquisition destabilizes plasmid inheritance.
    PLoS Genet. 2021;17:e1009656.
    PubMed     Abstract available


  64. XIA S, VanKuren NW, Chen C, Zhang L, et al
    Genomic analyses of new genes and their phenotypic effects reveal rapid evolution of essential functions in Drosophila development.
    PLoS Genet. 2021;17:e1009654.
    PubMed     Abstract available


    June 2021
  65. ZHU L, Fukunaga R
    RNA-binding protein Maca is crucial for gigantic male fertility factor gene expression, spermatogenesis, and male fertility, in Drosophila.
    PLoS Genet. 2021;17:e1009655.
    PubMed     Abstract available


  66. RESCAN M, Grulois D, Aboud EO, de Villemereuil P, et al
    Predicting population genetic change in an autocorrelated random environment: Insights from a large automated experiment.
    PLoS Genet. 2021;17:e1009611.
    PubMed     Abstract available


  67. FUCHS S, Kucklick M, Lehmann E, Beckmann A, et al
    Towards the characterization of the hidden world of small proteins in Staphylococcus aureus, a proteogenomics approach.
    PLoS Genet. 2021;17:e1009585.
    PubMed     Abstract available


  68. ZHENG NS, Stone CA, Jiang L, Shaffer CM, et al
    High-throughput framework for genetic analyses of adverse drug reactions using electronic health records.
    PLoS Genet. 2021;17:e1009593.
    PubMed     Abstract available


    May 2021
  69. WANG S, Li H, Song M, Tao Z, et al
    Copy number signature analysis tool and its application in prostate cancer reveals distinct mutational processes and clinical outcomes.
    PLoS Genet. 2021;17:e1009557.
    PubMed     Abstract available


  70. WHITING JR, Paris JR, van der Zee MJ, Parsons PJ, et al
    Drainage-structuring of ancestral variation and a common functional pathway shape limited genomic convergence in natural high- and low-predation guppies.
    PLoS Genet. 2021;17:e1009566.
    PubMed     Abstract available


  71. BOYS IN, Mar KB, Schoggins JW
    Functional-genomic analysis reveals intraspecies diversification of antiviral receptor transporter proteins in Xenopus laevis.
    PLoS Genet. 2021;17:e1009578.
    PubMed     Abstract available


  72. EVANS JM, Parker HG, Rutteman GR, Plassais J, et al
    Multi-omics approach identifies germline regulatory variants associated with hematopoietic malignancies in retriever dog breeds.
    PLoS Genet. 2021;17:e1009543.
    PubMed     Abstract available


  73. HOSKENS H, Liu D, Naqvi S, Lee MK, et al
    3D facial phenotyping by biometric sibling matching used in contemporary genomic methodologies.
    PLoS Genet. 2021;17:e1009528.
    PubMed     Abstract available


    April 2021
  74. FERRIS KG, Chavez AS, Suzuki TA, Beckman EJ, et al
    The genomics of rapid climatic adaptation and parallel evolution in North American house mice.
    PLoS Genet. 2021;17:e1009495.
    PubMed     Abstract available


  75. GARCIA-BAYONA L, Coyne MJ, Comstock LE
    Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering.
    PLoS Genet. 2021;17:e1009541.
    PubMed     Abstract available


    March 2021
  76. LUCEK K, Willi Y
    Drivers of linkage disequilibrium across a species' geographic range.
    PLoS Genet. 2021;17:e1009477.
    PubMed     Abstract available


  77. CARNEIRO M, Vieillard J, Andrade P, Boucher S, et al
    A loss-of-function mutation in RORB disrupts saltatorial locomotion in rabbits.
    PLoS Genet. 2021;17:e1009429.
    PubMed     Abstract available


  78. LI J, Sun L, Peng XL, Yu XM, et al
    Integrative genomic analysis of early neurogenesis reveals a temporal genetic program for differentiation and specification of preplate and Cajal-Retzius neurons.
    PLoS Genet. 2021;17:e1009355.
    PubMed     Abstract available


  79. WILLIS K, Burt A
    Double drives and private alleles for localised population genetic control.
    PLoS Genet. 2021;17:e1009333.
    PubMed     Abstract available


  80. MOLLER M, Habig M, Lorrain C, Feurtey A, et al
    Recent loss of the Dim2 DNA methyltransferase decreases mutation rate in repeats and changes evolutionary trajectory in a fungal pathogen.
    PLoS Genet. 2021;17:e1009448.
    PubMed     Abstract available


  81. HANNON E, Mansell G, Walker E, Nabais MF, et al
    Assessing the co-variability of DNA methylation across peripheral cells and tissues: Implications for the interpretation of findings in epigenetic epidemiology.
    PLoS Genet. 2021;17:e1009443.
    PubMed     Abstract available


  82. KORUNES KL, Goldberg A
    Human genetic admixture.
    PLoS Genet. 2021;17:e1009374.
    PubMed     Abstract available


  83. KERMINEN S, Cerioli N, Pacauskas D, Havulinna AS, et al
    Changes in the fine-scale genetic structure of Finland through the 20th century.
    PLoS Genet. 2021;17:e1009347.
    PubMed     Abstract available


  84. WALKER CR, Scally A, De Maio N, Goldman N, et al
    Short-range template switching in great ape genomes explored using pair hidden Markov models.
    PLoS Genet. 2021;17:e1009221.
    PubMed     Abstract available


    February 2021
  85. GARUD NR, Messer PW, Petrov DA
    Detection of hard and soft selective sweeps from Drosophila melanogaster population genomic data.
    PLoS Genet. 2021;17:e1009373.
    PubMed     Abstract available


  86. LIU N, Xu J, Liu H, Zhang S, et al
    Hippocampal transcriptome-wide association study and neurobiological pathway analysis for Alzheimer's disease.
    PLoS Genet. 2021;17:e1009363.
    PubMed     Abstract available


  87. ANDRADE P, Gazda MA, Araujo PM, Afonso S, et al
    Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates.
    PLoS Genet. 2021;17:e1009404.
    PubMed     Abstract available


  88. BROVKINA MV, Duffie R, Burtis AEC, Clowney EJ, et al
    Fruitless decommissions regulatory elements to implement cell-type-specific neuronal masculinization.
    PLoS Genet. 2021;17:e1009338.
    PubMed     Abstract available


  89. YU MHC, Chan MCY, Chung CCY, Li AWT, et al
    Actionable pharmacogenetic variants in Hong Kong Chinese exome sequencing data and projected prescription impact in the Hong Kong population.
    PLoS Genet. 2021;17:e1009323.
    PubMed     Abstract available


  90. LENZ J, Liefke R, Funk J, Shoup S, et al
    Ush regulates hemocyte-specific gene expression, fatty acid metabolism and cell cycle progression and cooperates with dNuRD to orchestrate hematopoiesis.
    PLoS Genet. 2021;17:e1009318.
    PubMed     Abstract available


  91. LANGNER T, Harant A, Gomez-Luciano LB, Shrestha RK, et al
    Genomic rearrangements generate hypervariable mini-chromosomes in host-specific isolates of the blast fungus.
    PLoS Genet. 2021;17:e1009386.
    PubMed     Abstract available


  92. ZHANG JL, Fu SJ, Chen SJ, Chen HH, et al
    Vestigial mediates the effect of insulin signaling pathway on wing-morph switching in planthoppers.
    PLoS Genet. 2021;17:e1009312.
    PubMed     Abstract available


  93. YELMEN B, Decelle A, Ongaro L, Marnetto D, et al
    Creating artificial human genomes using generative neural networks.
    PLoS Genet. 2021;17:e1009303.
    PubMed     Abstract available


  94. ZHANG W, Huang J, Cook DE
    Histone modification dynamics at H3K27 are associated with altered transcription of in planta induced genes in Magnaporthe oryzae.
    PLoS Genet. 2021;17:e1009376.
    PubMed     Abstract available


  95. FARRIS J, Alam MS, Rajashekara AM, Haldar K, et al
    Genomic analyses of glycine decarboxylase neurogenic mutations yield a large-scale prediction model for prenatal disease.
    PLoS Genet. 2021;17:e1009307.
    PubMed     Abstract available


    January 2021
  96. VY HMT, Jordan DM, Balick DJ, Do R, et al
    Probing the aggregated effects of purifying selection per individual on 1,380 medical phenotypes in the UK Biobank.
    PLoS Genet. 2021;17:e1009337.
    PubMed     Abstract available


  97. WIETERS B, Steige KA, He F, Koch EM, et al
    Polygenic adaptation of rosette growth in Arabidopsis thaliana.
    PLoS Genet. 2021;17:e1008748.
    PubMed     Abstract available


  98. OCHOA A, Storey JD
    Estimating FST and kinship for arbitrary population structures.
    PLoS Genet. 2021;17:e1009241.
    PubMed     Abstract available


  99. FEDER AF, Pennings PS, Petrov DA
    The clarifying role of time series data in the population genetics of HIV.
    PLoS Genet. 2021;17:e1009050.
    PubMed     Abstract available


  100. SAINI N, Giacobone CK, Klimczak LJ, Papas BN, et al
    UV-exposure, endogenous DNA damage, and DNA replication errors shape the spectra of genome changes in human skin.
    PLoS Genet. 2021;17:e1009302.
    PubMed     Abstract available


  101. MONNAHAN PJ, Colicchio J, Fishman L, Macdonald SJ, et al
    Predicting evolutionary change at the DNA level in a natural Mimulus population.
    PLoS Genet. 2021;17:e1008945.
    PubMed     Abstract available


  102. MINETA K, Goto K, Gojobori T, Alkuraya FS, et al
    Population structure of indigenous inhabitants of Arabia.
    PLoS Genet. 2021;17:e1009210.
    PubMed     Abstract available


  103. LEHMAN BJ, Lopez-Diaz FJ, Santisakultarm TP, Fang L, et al
    Dynamic regulation of CTCF stability and sub-nuclear localization in response to stress.
    PLoS Genet. 2021;17:e1009277.
    PubMed     Abstract available


    December 2020
  104. SCHWABL P, Maiguashca Sanchez J, Costales JA, Ocana-Mayorga S, et al
    Culture-free genome-wide locus sequence typing (GLST) provides new perspectives on Trypanosoma cruzi dispersal and infection complexity.
    PLoS Genet. 2020;16:e1009170.
    PubMed     Abstract available


  105. SWAN AL, Schutt C, Rozman J, Del Mar Muniz Moreno M, et al
    Mouse mutant phenotyping at scale reveals novel genes controlling bone mineral density.
    PLoS Genet. 2020;16:e1009190.
    PubMed     Abstract available


    November 2020
  106. BALACHANDRA VK, Verma J, Shankar M, Tucey TM, et al
    The RSC (Remodels the Structure of Chromatin) complex of Candida albicans shows compositional divergence with distinct roles in regulating pathogenic traits.
    PLoS Genet. 2020;16:e1009071.
    PubMed     Abstract available


  107. LECA I, Phillips AW, Hofer I, Landler L, et al
    A proteomic survey of microtubule-associated proteins in a R402H TUBA1A mutant mouse.
    PLoS Genet. 2020;16:e1009104.
    PubMed     Abstract available


  108. GOLDSTEIN JA, Weinstock JS, Bastarache LA, Larach DB, et al
    LabWAS: Novel findings and study design recommendations from a meta-analysis of clinical labs in two independent biobanks.
    PLoS Genet. 2020;16:e1009077.
    PubMed     Abstract available


  109. DIOFANO F, Weinmann K, Schneider I, Thiessen KD, et al
    Genetic compensation prevents myopathy and heart failure in an in vivo model of Bag3 deficiency.
    PLoS Genet. 2020;16:e1009088.
    PubMed     Abstract available


    October 2020
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    A cautionary note on the use of unsupervised machine learning algorithms to characterise malaria parasite population structure from genetic distance matrices.
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  111. QIAN J, Tanigawa Y, Du W, Aguirre M, et al
    A fast and scalable framework for large-scale and ultrahigh-dimensional sparse regression with application to the UK Biobank.
    PLoS Genet. 2020;16:e1009141.
    PubMed     Abstract available


  112. ZHANG W, Schoenebeck JJ
    The ninth life of the cat reference genome, Felis_catus.
    PLoS Genet. 2020;16:e1009045.
    PubMed    


  113. BROWN DW, Lin SH, Loh PR, Chanock SJ, et al
    Genetically predicted telomere length is associated with clonal somatic copy number alterations in peripheral leukocytes.
    PLoS Genet. 2020;16:e1009078.
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  114. BUCKLEY RM, Davis BW, Brashear WA, Farias FHG, et al
    A new domestic cat genome assembly based on long sequence reads empowers feline genomic medicine and identifies a novel gene for dwarfism.
    PLoS Genet. 2020;16:e1008926.
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  115. ATZINGER A, Lawrence JG
    Selection for ancient periodic motifs that do not impart DNA bending.
    PLoS Genet. 2020;16:e1009042.
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  116. BOURGEOIS Y, Ruggiero RP, Hariyani I, Boissinot S, et al
    Disentangling the determinants of transposable elements dynamics in vertebrate genomes using empirical evidences and simulations.
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  117. DIAZ-SANTIAGO E, Jabato FM, Rojano E, Seoane P, et al
    Phenotype-genotype comorbidity analysis of patients with rare disorders provides insight into their pathological and molecular bases.
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    September 2020
  118. GROSS C, Bortoluzzi C, de Ridder D, Megens HJ, et al
    Prioritizing sequence variants in conserved non-coding elements in the chicken genome using chCADD.
    PLoS Genet. 2020;16:e1009027.
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  119. SUMMERS DK, Perry DS, Rao B, Madhani HD, et al
    Coordinate genomic association of transcription factors controlled by an imported quorum sensing peptide in Cryptococcus neoformans.
    PLoS Genet. 2020;16:e1008744.
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  120. MULLEN DJ, Yan C, Kang DS, Zhou B, et al
    TENET 2.0: Identification of key transcriptional regulators and enhancers in lung adenocarcinoma.
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  121. DESHPANDE O, Lara RZ, Zhang OR, Concepcion D, et al
    ZNF423 patient variants, truncations, and in-frame deletions in mice define an allele-dependent range of midline brain abnormalities.
    PLoS Genet. 2020;16:e1009017.
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  122. ALI MB, Evans JM, Parker HG, Kim J, et al
    Genetic analysis of the modern Australian labradoodle dog breed reveals an excess of the poodle genome.
    PLoS Genet. 2020;16:e1008956.
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  123. STRUNZ T, Kiel C, Grassmann F, Ratnapriya R, et al
    A mega-analysis of expression quantitative trait loci in retinal tissue.
    PLoS Genet. 2020;16:e1008934.
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  124. STEIN V, Blank-Landeshammer B, Muntjes K, Marker R, et al
    The STRIPAK signaling complex regulates dephosphorylation of GUL1, an RNA-binding protein that shuttles on endosomes.
    PLoS Genet. 2020;16:e1008819.
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