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Genetics

Free Subscription Articles published in Proc Natl Acad Sci U S A Retrieve available abstracts of 149 articles: HTML format

Single Articles

May 2025
1. FRITTS RK, Ebmeier CC, Copley SD
   Transcriptomic and proteomic ramifications of segmental amplification in Escherichia coli.
   Proc Natl Acad Sci U S A. 2025;122:e2422424122.
   PubMed     Abstract available
   
   
   
2. GUPTA A, Mirarab S, Turakhia Y
   Accurate, scalable, and fully automated inference of species trees from raw genome assemblies using ROADIES.
   Proc Natl Acad Sci U S A. 2025;122:e2500553122.
   PubMed     Abstract available
   
   
   
3. JO Y, Greene TT, Chiale C, Zhang K, et al
   Genomic analysis of progenitors in viral infection implicates glucocorticoids as suppressors of plasmacytoid dendritic cell generation.
   Proc Natl Acad Sci U S A. 2025;122:e2410092122.
   PubMed     Abstract available
   
   
   April 2025
4. ROSENTHAL JS, Zhang D, Yin J, Long C, et al
   Molecular organization of central cholinergic synapses.
   Proc Natl Acad Sci U S A. 2025;122:e2422173122.
   PubMed     Abstract available
   
   
   
5. MCDONALD EF, Kim M, Olson JA 3rd, Meiler J, et al
   Proteostasis landscapes of cystic fibrosis variants reveal drug response vulnerability.
   Proc Natl Acad Sci U S A. 2025;122:e2418407122.
   PubMed     Abstract available
   
   
   
6. HUANG YH, Belk JA, Zhang R, Weiser NE, et al
   Unified molecular approach for spatial epigenome, transcriptome, and cell lineages.
   Proc Natl Acad Sci U S A. 2025;122:e2424070122.
   PubMed     Abstract available
   
   
   
7. ZHAO X, Liu Y, Yuan B, Cao Z, et al
   Genomic signatures associated with the evolutionary loss of egg yolk in parasitoid wasps.
   Proc Natl Acad Sci U S A. 2025;122:e2422292122.
   PubMed     Abstract available
   
   
   
8. SIERANT MC, Jin SC, Bilguvar K, Morton SU, et al
   Genomic analysis of 11,555 probands identifies 60 dominant congenital heart disease genes.
   Proc Natl Acad Sci U S A. 2025;122:e2420343122.
   PubMed     Abstract available
   
   
   March 2025
9. BLUMSTEIN M, Webster S, Hopkins R, Basler D, et al
   Genomics highlight an underestimation of phenology sensitivity to the urban heat island effect.
   Proc Natl Acad Sci U S A. 2025;122:e2408564122.
   PubMed     Abstract available
   
   
   
10. HU Z, Baer A, Hering L, de Sena Oliveira I, et al
    Conserved leucine-rich repeat proteins in the adhesive projectile slime of velvet worms.
    Proc Natl Acad Sci U S A. 2025;122:e2416282122.
    PubMed     Abstract available
    
    
    
11. ERVEN JAM, Mattiangeli V, Dreshaj M, Mullin VE, et al
    Archaeogenomic insights into commensalism and regional variation in pig management in Neolithic northwest Europe.
    Proc Natl Acad Sci U S A. 2025;122:e2410235122.
    PubMed     Abstract available
    
    
    
12. HART R, Moran NA, Ochman H
    Genomic divergence across the tree of life.
    Proc Natl Acad Sci U S A. 2025;122:e2319389122.
    PubMed     Abstract available
    
    
    
13. DICKMANDER RJ, Lenarcic EM, Sears JD, Hale AE, et al
    RNA-targeted proteomics identifies YBX1 as critical for efficient HCMV mRNA translation.
    Proc Natl Acad Sci U S A. 2025;122:e2421155122.
    PubMed     Abstract available
    
    
    February 2025
14. PENG Y, Wang Y, Liu Y, Fang X, et al
    The genomic and epigenomic landscapes of hemizygous genes across crops with contrasting reproductive systems.
    Proc Natl Acad Sci U S A. 2025;122:e2422487122.
    PubMed     Abstract available
    
    
    January 2025
15. NI B, Xiao L, Lin D, Zhang TL, et al
    Increasing pesticide diversity impairs soil microbial functions.
    Proc Natl Acad Sci U S A. 2025;122:e2419917122.
    PubMed     Abstract available
    
    
    December 2024
16. RUPERTI F, Dzieciatkowska M, Pankey MS, Asensio CS, et al
    Proteomic analysis of the sponge Aggregation Factor implicates an ancient toolkit for allorecognition and adhesion in animals.
    Proc Natl Acad Sci U S A. 2024;121:e2409125121.
    PubMed     Abstract available
    
    
    
17. PURNOMO GA, Kealy S, O'Connor S, Schapper A, et al
    The genetic origins and impacts of historical Papuan migrations into Wallacea.
    Proc Natl Acad Sci U S A. 2024;121:e2412355121.
    PubMed     Abstract available
    
    
    
18. SRINIVAS P, Peterson SB, Gallagher LA, Wang Y, et al
    Beyond genomics in Patescibacteria: A trove of unexplored biology packed into ultrasmall bacteria.
    Proc Natl Acad Sci U S A. 2024;121:e2419369121.
    PubMed     Abstract available
    
    
    
19. PRADA F, Haramaty L, Livnah O, Shaul R, et al
    Proteomic characterization of a foraminiferal test's organic matrix.
    Proc Natl Acad Sci U S A. 2024;121:e2417845121.
    PubMed     Abstract available
    
    
    
20. PADHI C, Field CM, Forneris CC, Olszewski D, et al
    Metagenomic study of lake microbial mats reveals protease-inhibiting antiviral peptides from a core microbiome member.
    Proc Natl Acad Sci U S A. 2024;121:e2409026121.
    PubMed     Abstract available
    
    
    November 2024
21. WAKANO JY, Aoki K
    Forward and backward modeling of cultural evolutionary processes.
    Proc Natl Acad Sci U S A. 2024;121:e2322880121.
    PubMed     Abstract available
    
    
    
22. STONE L, Lurquin PF
    A tale of two cultures: How L. Luca Cavalli-Sforza bridged the gap between science and the humanities.
    Proc Natl Acad Sci U S A. 2024;121:e2322878121.
    PubMed     Abstract available
    
    
    
23. ARMSTRONG CG, Clemente-Carvalho RBG, Turner NJ, Wickham S, et al
    Genetic differentiation and precolonial Indigenous cultivation of hazelnut (Corylus cornuta, Betulaceae) in Western North America.
    Proc Natl Acad Sci U S A. 2024;121:e2402304121.
    PubMed     Abstract available
    
    
    
24. HILLIS AL, Tamir T, Perry GE, Asara JM, et al
    Parallel phosphoproteomics and metabolomics map the global metabolic tyrosine phosphoproteome.
    Proc Natl Acad Sci U S A. 2024;121:e2413837121.
    PubMed     Abstract available
    
    
    
25. HOU C, Deng J, Wu C, Zhang J, et al
    Ultradeep O-GlcNAc proteomics reveals widespread O-GlcNAcylation on tyrosine residues of proteins.
    Proc Natl Acad Sci U S A. 2024;121:e2409501121.
    PubMed     Abstract available
    
    
    
26. BASTIDE P, Rocu P, Wirtz J, Hassler GW, et al
    Modeling the velocity of evolving lineages and predicting dispersal patterns.
    Proc Natl Acad Sci U S A. 2024;121:e2411582121.
    PubMed     Abstract available
    
    
    
27. LIPMAN DJ, Cherry JL, Strain E, Agarwala R, et al
    Genomic perspectives on foodborne illness.
    Proc Natl Acad Sci U S A. 2024;121:e2411894121.
    PubMed     Abstract available
    
    
    
28. WHEELER HB, Madrigal AA, Chaim IA
    Mapping the future of oxidative RNA damage in neurodegeneration: Rethinking the status quo with new tools.
    Proc Natl Acad Sci U S A. 2024;121:e2317860121.
    PubMed     Abstract available
    
    
    October 2024
29. CHOY MS, Nguyen HT, Kumar GS, Peti W, et al
    A protein phosphatase 1 specific phosphatase targeting peptide (PhosTAP) to identify the PP1 phosphatome.
    Proc Natl Acad Sci U S A. 2024;121:e2415383121.
    PubMed     Abstract available
    
    
    
30. LIANG K, Zhou L, Lei Q, Ruan T, et al
    Deep silicification-assisted long-term preservation of structural and genomic information across biospecies: From micro to macro.
    Proc Natl Acad Sci U S A. 2024;121:e2408273121.
    PubMed     Abstract available
    
    
    
31. GAO J, Yang J, Dong H, Tao S, et al
    The origin of methyl group in methanogen-mediated mercury methylation: From the Wolfe cycle.
    Proc Natl Acad Sci U S A. 2024;121:e2416761121.
    PubMed     Abstract available
    
    
    
32. BONNET T
    Joining forces to push past paradoxes: Combining quantitative genetics and genomics shows evolution hiding in plain sight.
    Proc Natl Acad Sci U S A. 2024;121:e2417220121.
    PubMed    
    
    
    
33. RYCROFT JA, Giorgio RT, Sargen M, Helaine S, et al
    Tracking the progeny of bacterial persisters using a CRISPR-based genomic recorder.
    Proc Natl Acad Sci U S A. 2024;121:e2405983121.
    PubMed     Abstract available
    
    
    
34. KOSTER AK, Yarishkin O, Dubin AE, Kefauver JM, et al
    Chemical mapping of the surface interactome of PIEZO1 identifies CADM1 as a modulator of channel inactivation.
    Proc Natl Acad Sci U S A. 2024;121:e2415934121.
    PubMed     Abstract available
    
    
    
35. WANG Z, Yu H, Bao W, Qu M, et al
    Proteomic and phosphoproteomic landscape of localized prostate cancer unveils distinct molecular subtypes and insights into precision therapeutics.
    Proc Natl Acad Sci U S A. 2024;121:e2402741121.
    PubMed     Abstract available
    
    
    September 2024
36. ARMSTRONG EE, Mooney JA, Solari KA, Kim BY, et al
    Unraveling the genomic diversity and admixture history of captive tigers in the United States.
    Proc Natl Acad Sci U S A. 2024;121:e2402924121.
    PubMed     Abstract available
    
    
    
37. CLARAMUNT S, Braun EL, Cracraft J, Fjeldsa J, et al
    Calibrating the genomic clock of modern birds using fossils.
    Proc Natl Acad Sci U S A. 2024;121:e2405887121.
    PubMed    
    
    
    
38. SHUVAEV S, Lachi D, Koulakov A, Zador A, et al
    Encoding innate ability through a genomic bottleneck.
    Proc Natl Acad Sci U S A. 2024;121:e2409160121.
    PubMed     Abstract available
    
    
    
39. TAIRA M, Ozato K, Harland RM, Moody SA, et al
    Igor B. Dawid (1935-2024): A pioneer of developmental and molecular biology.
    Proc Natl Acad Sci U S A. 2024;121:e2414869121.
    PubMed    
    
    
    
40. DU JH, Chen T, Gao M, Wang J, et al
    Joint trajectory inference for single-cell genomics using deep learning with a mixture prior.
    Proc Natl Acad Sci U S A. 2024;121:e2316256121.
    PubMed     Abstract available
    
    
    
41. CAHILL R, Wang Y, Xian RP, Lee AJ, et al
    Unsupervised pattern identification in spatial gene expression atlas reveals mouse brain regions beyond established ontology.
    Proc Natl Acad Sci U S A. 2024;121:e2319804121.
    PubMed     Abstract available
    
    
    
42. BADONI S, Pasion-Uy EA, Kor S, Kim SR, et al
    Multiomics of a rice population identifies genes and genomic regions that bestow low glycemic index and high protein content.
    Proc Natl Acad Sci U S A. 2024;121:e2410598121.
    PubMed     Abstract available
    
    
    
43. LAN T, Yang S, Li H, Zhang Y, et al
    Large-scale genome sequencing of giant pandas improves the understanding of population structure and future conservation initiatives.
    Proc Natl Acad Sci U S A. 2024;121:e2406343121.
    PubMed     Abstract available
    
    
    August 2024
44. NUNEZ JG, Paulose J, Mobius W, Beller DA, et al
    Range expansions across landscapes with quenched noise.
    Proc Natl Acad Sci U S A. 2024;121:e2411487121.
    PubMed     Abstract available
    
    
    July 2024
45. CHEN L, Chen A, Zhang XD, Saenz Robles MT, et al
    Targeted whole-genome recovery of single viral species in a complex environmental sample.
    Proc Natl Acad Sci U S A. 2024;121:e2404727121.
    PubMed     Abstract available
    
    
    
46. SOUILMI Y, Wasef S, Williams MP, Conroy G, et al
    Ancient genomes reveal over two thousand years of dingo population structure.
    Proc Natl Acad Sci U S A. 2024;121:e2407584121.
    PubMed     Abstract available
    
    
    
47. BORTEL P, Hagn G, Skos L, Bileck A, et al
    Memory effects of prior subculture may impact the quality of multiomic perturbation profiles.
    Proc Natl Acad Sci U S A. 2024;121:e2313851121.
    PubMed     Abstract available
    
    
    
48. PETROS BA
    Identifying changes in viral fitness using population genetic structure.
    Proc Natl Acad Sci U S A. 2024;121:e2410274121.
    PubMed    
    
    
    
49. LYNCH M, Wei W, Ye Z, Pfrender M, et al
    The genome-wide signature of short-term temporal selection.
    Proc Natl Acad Sci U S A. 2024;121:e2307107121.
    PubMed     Abstract available
    
    
    
50. TRUMPFF C, Monzel AS, Sandi C, Menon V, et al
    Psychosocial experiences are associated with human brain mitochondrial biology.
    Proc Natl Acad Sci U S A. 2024;121:e2317673121.
    PubMed     Abstract available
    
    
    
51. SASSO S, Saag L, Spros R, Beneker O, et al
    Capturing the fusion of two ancestries and kinship structures in Merovingian Flanders.
    Proc Natl Acad Sci U S A. 2024;121:e2406734121.
    PubMed     Abstract available
    
    
    June 2024
52. SLEDZIESKI S, Kshirsagar M, Baek M, Dodhia R, et al
    Democratizing protein language models with parameter-efficient fine-tuning.
    Proc Natl Acad Sci U S A. 2024;121:e2405840121.
    PubMed     Abstract available
    
    
    
53. NAM C, Li LY, Yang Q, Ziman B, et al
    A druggable cascade links methionine metabolism to epigenomic reprogramming in squamous cell carcinoma.
    Proc Natl Acad Sci U S A. 2024;121:e2320835121.
    PubMed     Abstract available
    
    
    
54. YERMAKOVICH D, Andre M, Brucato N, Kariwiga J, et al
    Denisovan admixture facilitated environmental adaptation in Papua New Guinean populations.
    Proc Natl Acad Sci U S A. 2024;121:e2405889121.
    PubMed     Abstract available
    
    
    
55. DONKER T, Papathanassopoulos A, Ghosh H, Kociurzynski R, et al
    Estimation of SARS-CoV-2 fitness gains from genomic surveillance data without prior lineage classification.
    Proc Natl Acad Sci U S A. 2024;121:e2314262121.
    PubMed     Abstract available
    
    
    
56. TAN CH, Wang TY, Park H, Lomenick B, et al
    Single-tissue proteomics in Caenorhabditis elegans reveals proteins resident in intestinal lysosome-related organelles.
    Proc Natl Acad Sci U S A. 2024;121:e2322588121.
    PubMed     Abstract available
    
    
    May 2024
57. HUANG S, Ran Q, Li XM, Bao X, et al
    MACSPI enables tissue-selective proteomic and interactomic analyses in multicellular organisms.
    Proc Natl Acad Sci U S A. 2024;121:e2319060121.
    PubMed     Abstract available
    
    
    
58. TEYSSONNIERE EM, Trebulle P, Muenzner J, Loegler V, et al
    Species-wide quantitative transcriptomes and proteomes reveal distinct genetic control of gene expression variation in yeast.
    Proc Natl Acad Sci U S A. 2024;121:e2319211121.
    PubMed     Abstract available
    
    
    
59. LAVANCHY E, Weir BS, Goudet J
    Detecting inbreeding depression in structured populations.
    Proc Natl Acad Sci U S A. 2024;121:e2315780121.
    PubMed     Abstract available
    
    
    
60. KOBAYASHI D, Inoue Y, Suzuki R, Matsuda M, et al
    Identification and epidemiological study of an uncultured flavivirus from ticks using viral metagenomics and pseudoinfectious viral particles.
    Proc Natl Acad Sci U S A. 2024;121:e2319400121.
    PubMed     Abstract available
    
    
    April 2024
61. STRINGER EJ, Gruber B, Sarre SD, Wardle GM, et al
    Boom-bust population dynamics drive rapid genetic change.
    Proc Natl Acad Sci U S A. 2024;121:e2320590121.
    PubMed     Abstract available
    
    
    
62. JUSTEN HC, Easton WE, Delmore KE
    Mapping seasonal migration in a songbird hybrid zone -- heritability, genetic correlations, and genomic patterns linked to speciation.
    Proc Natl Acad Sci U S A. 2024;121:e2313442121.
    PubMed     Abstract available
    
    
    
63. ZHANG J, Cong Q, Shen J, Song L, et al
    What one genus of showy moths can say about migration, adaptation, and wing pattern.
    Proc Natl Acad Sci U S A. 2024;121:e2319726121.
    PubMed     Abstract available
    
    
    
64. HOGAN MP, Holding ML, Nystrom GS, Colston TJ, et al
    The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom.
    Proc Natl Acad Sci U S A. 2024;121:e2313440121.
    PubMed     Abstract available
    
    
    
65. SUN P, Lu Z, Wang Z, Wang S, et al
    Subgenome-aware analyses reveal the genomic consequences of ancient allopolyploid hybridizations throughout the cotton family.
    Proc Natl Acad Sci U S A. 2024;121:e2313921121.
    PubMed     Abstract available
    
    
    
66. BAHARAV TZ, Tse D, Salzman J
    OASIS: An interpretable, finite-sample valid alternative to Pearson's X(2) for scientific discovery.
    Proc Natl Acad Sci U S A. 2024;121:e2304671121.
    PubMed     Abstract available
    
    
    
67. LONG BM, Matsuda Y, Moroney JV
    Algal chloroplast pyrenoids: Evidence for convergent evolution.
    Proc Natl Acad Sci U S A. 2024;121:e2402546121.
    PubMed    
    
    
    March 2024
68. KEHLET-DELGADO H, Montoya AP, Jensen KT, Wendlandt CE, et al
    The evolutionary genomics of adaptation to stress in wild rhizobium bacteria.
    Proc Natl Acad Sci U S A. 2024;121:e2311127121.
    PubMed     Abstract available
    
    
    
69. SHEINMAN M, Arndt PF, Massip F
    Modeling the mosaic structure of bacterial genomes to infer their evolutionary history.
    Proc Natl Acad Sci U S A. 2024;121:e2313367121.
    PubMed     Abstract available
    
    
    
70. PEZZINI D, Taylor KL, Reisig DD, Fritz ML, et al
    Cross-pollination in seed-blended refuge and selection for Vip3A resistance in a lepidopteran pest as detected by genomic monitoring.
    Proc Natl Acad Sci U S A. 2024;121:e2319838121.
    PubMed     Abstract available
    
    
    
71. SCHRAIBER JG, Edge MD
    Heritability within groups is uninformative about differences among groups: Cases from behavioral, evolutionary, and statistical genetics.
    Proc Natl Acad Sci U S A. 2024;121:e2319496121.
    PubMed     Abstract available
    
    
    
72. GROH JS, Coop G
    The temporal and genomic scale of selection following hybridization.
    Proc Natl Acad Sci U S A. 2024;121:e2309168121.
    PubMed     Abstract available
    
    
    
73. BORETTO M, Geurts MH, Gandhi S, Ma Z, et al
    Epidermal growth factor receptor (EGFR) is a target of the tumor-suppressor E3 ligase FBXW7.
    Proc Natl Acad Sci U S A. 2024;121:e2309902121.
    PubMed     Abstract available
    
    
    
74. KRUEGER J, Preusse M, Oswaldo Gomez N, Frommeyer YN, et al
    tRNA epitranscriptome determines pathogenicity of the opportunistic pathogen Pseudomonas aeruginosa.
    Proc Natl Acad Sci U S A. 2024;121:e2312874121.
    PubMed     Abstract available
    
    
    
75. SIMOES LG, Peyroteo-Stjerna R, Marchand G, Bernhardsson C, et al
    Genomic ancestry and social dynamics of the last hunter-gatherers of Atlantic France.
    Proc Natl Acad Sci U S A. 2024;121:e2310545121.
    PubMed     Abstract available
    
    
    
76. MOROMIZATO R, Fukuda K, Suzuki S, Motomura T, et al
    Pyrenoid proteomics reveals independent evolution of the CO(2)-concentrating organelle in chlorarachniophytes.
    Proc Natl Acad Sci U S A. 2024;121:e2318542121.
    PubMed     Abstract available
    
    
    February 2024
77. KEROACK CD, Elsworth B, Tennessen JA, Paul AS, et al
    Comparative chemical genomics in Babesia species identifies the alkaline phosphatase PhoD as a determinant of antiparasitic resistance.
    Proc Natl Acad Sci U S A. 2024;121:e2312987121.
    PubMed     Abstract available
    
    
    
78. LUKHTANOV VA
    Polytypic species concept and subspecies in the genomic era.
    Proc Natl Acad Sci U S A. 2024;121:e2317038121.
    PubMed    
    
    
    
79. SIMON A, Coop G
    The contribution of gene flow, selection, and genetic drift to five thousand years of human allele frequency change.
    Proc Natl Acad Sci U S A. 2024;121:e2312377121.
    PubMed     Abstract available
    
    
    
80. NOCH EK, Palma L, Yim I, Bullen N, et al
    Cysteine induces mitochondrial reductive stress in glioblastoma through hydrogen peroxide production.
    Proc Natl Acad Sci U S A. 2024;121:e2317343121.
    PubMed     Abstract available
    
    
    
81. PHUNG TK, Berndsen K, Shastry R, Phan TLCHB, et al
    CURTAIN-A unique web-based tool for exploration and sharing of MS-based proteomics data.
    Proc Natl Acad Sci U S A. 2024;121:e2312676121.
    PubMed     Abstract available
    
    
    
82. YI T, Wagner G
    Malignant tumor cells engender second membrane-lined organelles for self-protection and tumor progression.
    Proc Natl Acad Sci U S A. 2024;121:e2317141121.
    PubMed     Abstract available
    
    
    
83. SPRINGSTEIN BL, Paulo JA, Park H, Henry K, et al
    Systematic analysis of nonprogrammed frameshift suppression in E. coli via translational tiling proteomics.
    Proc Natl Acad Sci U S A. 2024;121:e2317453121.
    PubMed     Abstract available
    
    
    
84. BAXI AB, Li J, Quach VM, Pade LR, et al
    Cell lineage-guided mass spectrometry reveals increased energy metabolism and reactive oxygen species in the vertebrate organizer.
    Proc Natl Acad Sci U S A. 2024;121:e2311625121.
    PubMed     Abstract available
    
    
    January 2024
85. CAMACHO-MATEU J, Lampo A, Sireci M, Munoz MA, et al
    Sparse species interactions reproduce abundance correlation patterns in microbial communities.
    Proc Natl Acad Sci U S A. 2024;121:e2309575121.
    PubMed     Abstract available
    
    
    
86. SUTTER PA, Willis CM, Menoret A, Nicaise AM, et al
    Astrocytic TIMP-1 regulates production of Anastellin, an inhibitor of oligodendrocyte differentiation and FTY720 responses.
    Proc Natl Acad Sci U S A. 2024;121:e2306816121.
    PubMed     Abstract available
    
    
    
87. LI C, Wickell D, Kuo LY, Chen X, et al
    Extraordinary preservation of gene collinearity over three hundred million years revealed in homosporous lycophytes.
    Proc Natl Acad Sci U S A. 2024;121:e2312607121.
    PubMed     Abstract available
    
    
    
88. ZHANG Y, Zhang H, Wu Y
    A general approach for inferring the ancestry of recent ancestors of an admixed individual.
    Proc Natl Acad Sci U S A. 2024;121:e2316242120.
    PubMed     Abstract available
    
    
    
89. YUAN J, Kitchener AC, Lackey LB, Sun T, et al
    The genome of the black-footed cat: Revealing a rich natural history and urgent conservation priorities for small felids.
    Proc Natl Acad Sci U S A. 2024;121:e2310763120.
    PubMed     Abstract available
    
    
    
90. VAUGHAN TG, Scire J, Nadeau SA, Stadler T, et al
    Estimates of early outbreak-specific SARS-CoV-2 epidemiological parameters from genomic data.
    Proc Natl Acad Sci U S A. 2024;121:e2308125121.
    PubMed     Abstract available
    
    
    December 2023
91. WEN J, Nasrallah IM, Abdulkadir A, Satterthwaite TD, et al
    Genomic loci influence patterns of structural covariance in the human brain.
    Proc Natl Acad Sci U S A. 2023;120:e2300842120.
    PubMed     Abstract available
    
    
    
92. ZHU S, Liu J, Patel V, Zhao X, et al
    Antigen exposure reshapes chromatin architecture in central memory CD8(+) T cells and imprints enhanced recall capacity.
    Proc Natl Acad Sci U S A. 2023;120:e2313476120.
    PubMed     Abstract available
    
    
    
93. SKAAR EP
    Biogeography of the genus Staphylococci on human skin.
    Proc Natl Acad Sci U S A. 2023;120:e2318509120.
    PubMed    
    
    
    
94. ZHONG X, Moresco JJ, Diedrich JK, Pinto AM, et al
    Essential role of MFSD1-GLMP-GIMAP5 in lymphocyte survival and liver homeostasis.
    Proc Natl Acad Sci U S A. 2023;120:e2314429120.
    PubMed     Abstract available
    
    
    
95. BLANCO-PASTOR JL
    Inclusion of highly admixed genotypes in grapevine genomic analyses leads to an equivocal reconstruction of its domestication history.
    Proc Natl Acad Sci U S A. 2023;120:e2310026120.
    PubMed    
    
    
    
96. JIN L, Chen Y, Muzaffar S, Li C, et al
    Epigenetic switch reshapes epithelial progenitor cell signatures and drives inflammatory pathogenesis in hidradenitis suppurativa.
    Proc Natl Acad Sci U S A. 2023;120:e2315096120.
    PubMed     Abstract available
    
    
    November 2023
97. ESPINOZA B, Adiga A, Venkatramanan S, Warren AS, et al
    Coupled models of genomic surveillance and evolving pandemics with applications for timely public health interventions.
    Proc Natl Acad Sci U S A. 2023;120:e2305227120.
    PubMed     Abstract available
    
    
    
98. TORRES ROBLES J, Lou HJ, Shi G, Pan PL, et al
    Linear motif specificity in signaling through p38alpha and ERK2 mitogen-activated protein kinases.
    Proc Natl Acad Sci U S A. 2023;120:e2316599120.
    PubMed     Abstract available
    
    
    
99. SIMMONS M, Horbelt N, Sverko T, Scoppola E, et al
    Invasive mussels fashion silk-like byssus via mechanical processing of massive horizontally acquired coiled coils.
    Proc Natl Acad Sci U S A. 2023;120:e2311901120.
    PubMed     Abstract available
    
    
    
100. JOGLEKAR P, Conlan S, Lee-Lin SQ, Deming C, et al
     Integrated genomic and functional analyses of human skin-associated Staphylococcus reveal extensive inter- and intra-species diversity.
     Proc Natl Acad Sci U S A. 2023;120:e2310585120.
     PubMed     Abstract available
     
     
     
101. HU W, Zhang R, Xu H, Li Y, et al
     CAMSAP1 role in orchestrating structure and dynamics of manchette microtubule minus-ends impacts male fertility during spermiogenesis.
     Proc Natl Acad Sci U S A. 2023;120:e2313787120.
     PubMed     Abstract available
     
     
     October 2023
102. BENEGAS G, Batra SS, Song YS
     DNA language models are powerful predictors of genome-wide variant effects.
     Proc Natl Acad Sci U S A. 2023;120:e2311219120.
     PubMed     Abstract available
     
     
     
103. CAO X, Kose C, Selby CP, Sancar A, et al
     In vitro DNA repair genomics using XR-seq with Escherichia coli and mammalian cell-free extracts.
     Proc Natl Acad Sci U S A. 2023;120:e2314233120.
     PubMed     Abstract available
     
     
     
104. MATHUR S, Mason AJ, Bradburd GS, Gibbs HL, et al
     Functional genomic diversity is correlated with neutral genomic diversity in populations of an endangered rattlesnake.
     Proc Natl Acad Sci U S A. 2023;120:e2303043120.
     PubMed     Abstract available
     
     
     
105. XIE Y, Ersan S, Guan X, Wang J, et al
     Unexpected metabolic rewiring of CO(2) fixation in H(2)-mediated materials-biology hybrids.
     Proc Natl Acad Sci U S A. 2023;120:e2308373120.
     PubMed     Abstract available
     
     
     
106. LIAO SE, Sudarshan M, Regev O
     Deciphering RNA splicing logic with interpretable machine learning.
     Proc Natl Acad Sci U S A. 2023;120:e2221165120.
     PubMed     Abstract available
     
     
     
107. DUFRESNES C, Poyarkov N, Jablonski D
     Acknowledging more biodiversity without more species.
     Proc Natl Acad Sci U S A. 2023;120:e2302424120.
     PubMed     Abstract available
     
     
     
108. GU TT, Wu H, Yang F, Gaubert P, et al
     Genomic analysis reveals a cryptic pangolin species.
     Proc Natl Acad Sci U S A. 2023;120:e2304096120.
     PubMed     Abstract available
     
     
     September 2023
109. ROTHMAN JE
     Starting at Go: Protein structure prediction succumbs to machine learning.
     Proc Natl Acad Sci U S A. 2023;120:e2311128120.
     PubMed     Abstract available
     
     
     
110. MASON FM, Kounlavong ES, Tebeje AT, Dahiya R, et al
     SETD2 safeguards the genome against isochromosome formation.
     Proc Natl Acad Sci U S A. 2023;120:e2303752120.
     PubMed     Abstract available
     
     
     
111. SIRECI M, Munoz MA, Grilli J
     Environmental fluctuations explain the universal decay of species-abundance correlations with phylogenetic distance.
     Proc Natl Acad Sci U S A. 2023;120:e2217144120.
     PubMed     Abstract available
     
     
     
112. OH DH, Ma X, Hogg SJ, He J, et al
     Rationally designed chimeric PI3K-BET bromodomain inhibitors elicit curative responses in MYC-driven lymphoma.
     Proc Natl Acad Sci U S A. 2023;120:e2306414120.
     PubMed     Abstract available
     
     
     
113. TAKAKURA M, Lam YH, Nakagawa R, Ng MY, et al
     Differential second messenger signaling via dopamine neurons bidirectionally regulates memory retention.
     Proc Natl Acad Sci U S A. 2023;120:e2304851120.
     PubMed     Abstract available
     
     
     August 2023
114. TAN R, Hoare M, Welle KA, Swovick K, et al
     Folding stabilities of ribosome-bound nascent polypeptides probed by mass spectrometry.
     Proc Natl Acad Sci U S A. 2023;120:e2303167120.
     PubMed     Abstract available
     
     
     
115. ZELLER MA, Ma J, Wong FY, Tum S, et al
     The genomic landscape of swine influenza A viruses in Southeast Asia.
     Proc Natl Acad Sci U S A. 2023;120:e2301926120.
     PubMed     Abstract available
     
     
     
116. MANGIOLA S, Roth-Schulze AJ, Trussart M, Zozaya-Valdes E, et al
     sccomp: Robust differential composition and variability analysis for single-cell data.
     Proc Natl Acad Sci U S A. 2023;120:e2203828120.
     PubMed     Abstract available
     
     
     
117. HUNG TH, So T, Thammavong B, Chamchumroon V, et al
     Range-wide differential adaptation and genomic offset in critically endangered Asian rosewoods.
     Proc Natl Acad Sci U S A. 2023;120:e2301603120.
     PubMed     Abstract available
     
     
     
118. MEHROTRA T, Konar D, Pragasam AK, Kumar S, et al
     Antimicrobial resistance heterogeneity among multidrug-resistant Gram-negative pathogens: Phenotypic, genotypic, and proteomic analysis.
     Proc Natl Acad Sci U S A. 2023;120:e2305465120.
     PubMed     Abstract available
     
     
     
119. RUBINA A, Patel M, Nightingale K, Potts M, et al
     ADAM17 targeting by human cytomegalovirus remodels the cell surface proteome to simultaneously regulate multiple immune pathways.
     Proc Natl Acad Sci U S A. 2023;120:e2303155120.
     PubMed     Abstract available
     
     
     
120. MALINVERNI D, Zamuner S, Rebeaud ME, Barducci A, et al
     Data-driven large-scale genomic analysis reveals an intricate phylogenetic and functional landscape in J-domain proteins.
     Proc Natl Acad Sci U S A. 2023;120:e2218217120.
     PubMed     Abstract available
     
     
     July 2023
121. FOKKENS L, Rep M
     Population genomics reveals meiotic recombination in Fusarium oxysporum.
     Proc Natl Acad Sci U S A. 2023;120:e2309677120.
     PubMed    
     
     
     
122. DAVIDI L, Gallaher SD, Ben-David E, Purvine SO, et al
     Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management.
     Proc Natl Acad Sci U S A. 2023;120:e2305495120.
     PubMed     Abstract available
     
     
     
123. CHARLES OJ, Venturini C, Gantt S, Atkinson C, et al
     Genomic and geographical structure of human cytomegalovirus.
     Proc Natl Acad Sci U S A. 2023;120:e2221797120.
     PubMed     Abstract available
     
     
     
124. FUJIMURA T, Esteban R, Wickner RB
     Genomic fold of a "naked" ssRNA virus is critical for stability and propagation.
     Proc Natl Acad Sci U S A. 2023;120:e2309329120.
     PubMed    
     
     
     
125. GU Z, Wang L, Dong Q, Xu K, et al
     Aberrant LYZ expression in tumor cells serves as the potential biomarker and target for HCC and promotes tumor progression via csGRP78.
     Proc Natl Acad Sci U S A. 2023;120:e2215744120.
     PubMed     Abstract available
     
     
     
126. GARDNER EM, Bruun-Lund S, Niissalo M, Chantarasuwan B, et al
     Echoes of ancient introgression punctuate stable genomic lineages in the evolution of figs.
     Proc Natl Acad Sci U S A. 2023;120:e2222035120.
     PubMed     Abstract available
     
     
     
127. VARGAS R JR, Luna MJ, Freschi L, Marin M, et al
     Phase variation as a major mechanism of adaptation in Mycobacterium tuberculosis complex.
     Proc Natl Acad Sci U S A. 2023;120:e2301394120.
     PubMed     Abstract available
     
     
     
128. SARTORIO MG, Pardue EJ, Scott NE, Feldman MF, et al
     Human gut bacteria tailor extracellular vesicle cargo for the breakdown of diet- and host-derived glycans.
     Proc Natl Acad Sci U S A. 2023;120:e2306314120.
     PubMed     Abstract available
     
     
     
129. FAYYAZ A, Robinson G, Chang PL, Bekele D, et al
     Hiding in plain sight: Genome-wide recombination and a dynamic accessory genome drive diversity in Fusarium oxysporum f.sp. ciceris.
     Proc Natl Acad Sci U S A. 2023;120:e2220570120.
     PubMed     Abstract available
     
     
     June 2023
130. HASEGAWA N, Techer MA, Adjlane N, Al-Hissnawi MS, et al
     Evolutionarily diverse origins of deformed wing viruses in western honey bees.
     Proc Natl Acad Sci U S A. 2023;120:e2301258120.
     PubMed     Abstract available
     
     
     
131. NOSIL P, Soria-Carrasco V, Villoutreix R, De-la-Mora M, et al
     Complex evolutionary processes maintain an ancient chromosomal inversion.
     Proc Natl Acad Sci U S A. 2023;120:e2300673120.
     PubMed     Abstract available
     
     
     
132. HARRISON LB, Behr MA
     Mutation rates and the molecular epidemiology of Mycobacterium abscessus.
     Proc Natl Acad Sci U S A. 2023;120:e2307499120.
     PubMed    
     
     
     
133. GOMEZ-BAENA G, Pounder KC, Halstead JO, Roberts SA, et al
     Unraveling female communication through scent marks in the Norway rat.
     Proc Natl Acad Sci U S A. 2023;120:e2300794120.
     PubMed     Abstract available
     
     
     
134. KASUGA Y, Ouda R, Watanabe M, Sun X, et al
     FBXO11 constitutes a major negative regulator of MHC class II through ubiquitin-dependent proteasomal degradation of CIITA.
     Proc Natl Acad Sci U S A. 2023;120:e2218955120.
     PubMed     Abstract available
     
     
     
135. XIAO H, Liu Z, Wang N, Long Q, et al
     Adaptive and maladaptive introgression in grapevine domestication.
     Proc Natl Acad Sci U S A. 2023;120:e2222041120.
     PubMed     Abstract available
     
     
     
136. YOUNIS S, Jouneau A, Larsson M, Oudin JF, et al
     Ablation of ZC3H11A causes early embryonic lethality and dysregulation of metabolic processes.
     Proc Natl Acad Sci U S A. 2023;120:e2216799120.
     PubMed     Abstract available
     
     
     May 2023
137. SHIRAKAWA KT, Sala FA, Miyachiro MM, Job V, et al
     Architecture and genomic arrangement of the MurE-MurF bacterial cell wall biosynthesis complex.
     Proc Natl Acad Sci U S A. 2023;120:e2219540120.
     PubMed     Abstract available
     
     
     
138. GOYCHUK A, Kannan D, Chakraborty AK, Kardar M, et al
     Polymer folding through active processes recreates features of genome organization.
     Proc Natl Acad Sci U S A. 2023;120:e2221726120.
     PubMed     Abstract available
     
     
     
139. MELBY JA, Brown KA, Gregorich ZR, Roberts DS, et al
     High sensitivity top-down proteomics captures single muscle cell heterogeneity in large proteoforms.
     Proc Natl Acad Sci U S A. 2023;120:e2222081120.
     PubMed     Abstract available
     
     
     
140. REITZ CJ, Tavassoli M, Kim DH, Shah S, et al
     Proteomics and phosphoproteomics of failing human left ventricle identifies dilated cardiomyopathy-associated phosphorylation of CTNNA3.
     Proc Natl Acad Sci U S A. 2023;120:e2212118120.
     PubMed     Abstract available
     
     
     
141. SEXTON DL, Hashimi A, Beskrovnaya P, Sibanda L, et al
     The cell envelope of Thermotogae suggests a mechanism for outer membrane biogenesis.
     Proc Natl Acad Sci U S A. 2023;120:e2303275120.
     PubMed     Abstract available
     
     
     April 2023
142. BARTOLEC TK, Vazquez-Campos X, Norman A, Luong C, et al
     Cross-linking mass spectrometry discovers, evaluates, and corroborates structures and protein-protein interactions in the human cell.
     Proc Natl Acad Sci U S A. 2023;120:e2219418120.
     PubMed     Abstract available
     
     
     
143. WANG YJ, Tain T, Yu JY, Li J, et al
     Genomic and structural basis for evolution of tropane alkaloid biosynthesis.
     Proc Natl Acad Sci U S A. 2023;120:e2302448120.
     PubMed     Abstract available
     
     
     
144. LLEWELLYN J, Mallikarjun V, Appleton E, Osipova M, et al
     Loss of regulation of protein synthesis and turnover underpins an attenuated stress response in senescent human mesenchymal stem cells.
     Proc Natl Acad Sci U S A. 2023;120:e2210745120.
     PubMed     Abstract available
     
     
     
145. GESESSE CA, Nigir B, de Sousa K, Gianfranceschi L, et al
     Genomics-driven breeding for local adaptation of durum wheat is enhanced by farmers' traditional knowledge.
     Proc Natl Acad Sci U S A. 2023;120:e2205774119.
     PubMed     Abstract available
     
     
     
146. HUANG K, Jahani M, Gouzy J, Legendre A, et al
     The genomics of linkage drag in inbred lines of sunflower.
     Proc Natl Acad Sci U S A. 2023;120:e2205783119.
     PubMed     Abstract available
     
     
     
147. SANCHEZ D, Sadoun SB, Mary-Huard T, Allier A, et al
     Improving the use of plant genetic resources to sustain breeding programs' efficiency.
     Proc Natl Acad Sci U S A. 2023;120:e2205780119.
     PubMed     Abstract available
     
     
     March 2023
148. LATRILLE T, Rodrigue N, Lartillot N
     Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale.
     Proc Natl Acad Sci U S A. 2023;120:e2214977120.
     PubMed     Abstract available
     
     
     February 2023
149. SCHMID C, Schiffels S
     Estimating human mobility in Holocene Western Eurasia with large-scale ancient genomic data.
     Proc Natl Acad Sci U S A. 2023;120:e2218375120.
     PubMed     Abstract available
     
     

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