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	COVID-19: Daily Top 10 Papers

Bacterial Infections and Mycoses

Free Subscription 04.10.2021 2 Antimicrob Agents Chemother 2 Chemotherapy 1 Chest 1 Curr Microbiol 1 Diagn Microbiol Infect Dis 3 Dig Dis Sci 2 Eur J Clin Microbiol Infect Dis 2 J Biol Chem 1 J Clin Invest 8 J Infect Dis 4 JAMA 1 Lancet 1 Minerva Pediatr (Torino) 3 N Engl J Med 3 Neurology 1 Pediatrics 1 PLoS Biol 1 PLoS Comput Biol 1 PLoS Genet 17 PLoS One 1 Proc Natl Acad Sci U S A

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Single Articles

Antimicrob Agents Chemother

1. DIAZ-GARCIA J, Mesquida A, Gomez A, Machado M, et al
   Antifungal susceptibility testing identifies the abdominal cavity as a source of Candida glabrata resistant isolates.
   Antimicrob Agents Chemother. 2021 Sep 27:AAC0124921. doi: 10.1128/AAC.01249.
   PubMed         Abstract available
   
   
2. ALMEIDA D, Converse PJ, Li SY, Upton AM, et al
   Comparative efficacy of the novel diarylquinoline TBAJ-876 and bedaquiline against a resistant Rv0678 mutant in a mouse model of tuberculosis.
   Antimicrob Agents Chemother. 2021 Sep 27:AAC0141221. doi: 10.1128/AAC.01412.
   PubMed         Abstract available
   
   

   
   Chemotherapy

3. HAEILI M, Abdollahi A, Ahmadi A, Khoshbayan A, et al
   Molecular Characterization of Tigecycline Non-Susceptibility among Extensively Drug-Resistant Acinetobacter baumannii Isolates of Clinical Origin.
   Chemotherapy. 2021;66:99-106.
   PubMed         Abstract available
   
   
4. SANTORO M, Rotolo C, Accurso V, Morreale I, et al
   Isolated Nodal TBC Reactivation in a Patient with Post-Thrombocythemia Myelofibrosis Treated with Ruxolitinib: Case Report and Review of the Literature.
   Chemotherapy. 2021;66:87-91.
   PubMed         Abstract available
   
   

   
   Chest

5. GRIFFITH DE, Aksamit TR
   Managing Mycobacterium avium Complex Lung Disease With a Little Help From My Friend.
   Chest. 2021;159:1372-1381.
   PubMed         Abstract available
   
   

   
   Curr Microbiol

6. SHAFIPOUR M, Shirzad-Aski H, Ghaemi EA, Sohrabi A, et al
   Mycobacterium tuberculosis typing using Allele-specific oligonucleotide multiplex PCR (ASO-PCR) method.
   Curr Microbiol. 2021 Sep 27. pii: 10.1007/s00284-021-02659.
   PubMed         Abstract available
   
   

   
   Diagn Microbiol Infect Dis

7. XIA XJ, Zhong Y, Sang B, Li QP, et al
   Violet colonies of Talaromyces marneffei produce on CHROMagar candida medium.
   Diagn Microbiol Infect Dis. 2021;101:115533.
   PubMed         Abstract available
   
   

   
   Dig Dis Sci

8. HSU D, Martin B, Forgo E, Greene E, et al
   Tough to Swallow: Dysphagia in a Child with an Aberrant Left Subclavian Artery.
   Dig Dis Sci. 2021;66:2882-2887.
   PubMed        
   
   
9. SMITH R, Hubers J, Farraye FA, Sampene E, et al
   Accuracy of Self-Reported Vaccination Status in a Cohort of Patients with Inflammatory Bowel Disease.
   Dig Dis Sci. 2020 Sep 29. pii: 10.1007/s10620-020-06631.
   PubMed         Abstract available
   
   
10. VARMA S, Faye AS, Kannan A, Lawlor G, et al
    Patients with More Severe IBD Get Clostridioides difficile Rather than Clostridioides difficile Increasing the Severity of IBD.
    Dig Dis Sci. 2021;66:3113-3123.
    PubMed         Abstract available
    
    

    
    Eur J Clin Microbiol Infect Dis

11. MAATAOUI N, Chemali L, Patrier J, Tran Dinh A, et al
    Impact of rapid multiplex PCR on management of antibiotic therapy in COVID-19-positive patients hospitalized in intensive care unit.
    Eur J Clin Microbiol Infect Dis. 2021;40:2227-2234.
    PubMed         Abstract available
    
    
12. LONG N, Zhang Y, Qiu M, Deng J, et al
    Dynamic changes of inflammatory response and oxidative stress induced by methicillin-resistant Staphylococcus aureus in mice.
    Eur J Clin Microbiol Infect Dis. 2021 Sep 25. pii: 10.1007/s10096-021-04349.
    PubMed         Abstract available
    
    

    
    J Biol Chem

13. LEMAK S, Serbanescu MA, Khusnutdinova AN, Ruszkowski M, et al
    Structural and biochemical insights into CRISPR RNA processing by the Cas5c ribonuclease SMU1763 from Streptococcus mutans.
    J Biol Chem. 2021 Sep 27:101251. doi: 10.1016/j.jbc.2021.101251.
    PubMed         Abstract available
    
    
14. FRANK MW, Whaley SG, Rock CO
    Branched-chain amino acid metabolism controls membrane phospholipid structure in Staphylococcus aureus.
    J Biol Chem. 2021 Sep 27:101255. doi: 10.1016/j.jbc.2021.101255.
    PubMed         Abstract available
    
    

    
    J Clin Invest

15. LI H, Bradbury JA, Edin ML, Graves JP, et al
    sEH promotes macrophage phagocytosis and lung clearance of Streptococcus pneumoniae.
    J Clin Invest. 2021 Sep 30. pii: 129679. doi: 10.1172/JCI129679.
    PubMed         Abstract available
    
    

    
    J Infect Dis

16. BROWN AO, Singh KV, Cruz MR, Kaval KG, et al
    Cardiac Microlesions Form During Severe Bacteremic Enterococcus faecalis Infection.
    J Infect Dis. 2021;223:508-516.
    PubMed         Abstract available
    
    
17. HU SY, Tsang SH, Chen F, Pan QJ, et al
    Association between Common Vaginal Infections and Cervical Non-HPV16/18 Infection in HPV-Vaccinated Women.
    J Infect Dis. 2020 Jul 2. pii: 5866538. doi: 10.1093.
    PubMed         Abstract available
    
    
18. PIKE CM, Theriot CM
    Mechanisms of Colonization Resistance Against Clostridioides difficile.
    J Infect Dis. 2021;223.
    PubMed         Abstract available
    
    
19. ANTHONY WE, Burnham CD, Dantas G, Kwon JH, et al
    The Gut Microbiome as a Reservoir for Antimicrobial Resistance.
    J Infect Dis. 2020 Dec 16. pii: 6039355. doi: 10.1093.
    PubMed         Abstract available
    
    
20. GERARDIN Y, Timberlake S, Allegretti JR, Smith MB, et al
    Beyond Fecal Microbiota Transplantation: Developing Drugs from the Microbiome.
    J Infect Dis. 2021;223.
    PubMed         Abstract available
    
    
21. LAGENAUR LA, Hemmerling A, Chiu C, Miller S, et al
    Connecting the Dots: Translating the Vaginal Microbiome Into a Drug.
    J Infect Dis. 2021;223.
    PubMed         Abstract available
    
    
22. DUCARMON QR, Kuijper EJ, Olle B
    Opportunities and Challenges in Development of Live Biotherapeutic Products to Fight Infections.
    J Infect Dis. 2021;223.
    PubMed         Abstract available
    
    
23. GOLOB JL, Rao K
    Signal vs. noise: how to analyze the microbiome and make progress on antimicrobial resistance.
    J Infect Dis. 2021 Apr 21. pii: 6242384. doi: 10.1093.
    PubMed        
    
    

    
    JAMA

24. 
    The Fad for Pseudoscience: Pertinent Queries and Musings.
    JAMA. 2021;326:981.
    PubMed        
    
    
25. JOHNSTONE J, Meade M, Lauzier F, Marshall J, et al
    Effect of Probiotics on Incident Ventilator-Associated Pneumonia in Critically Ill Patients: A Randomized Clinical Trial.
    JAMA. 2021;326:1024-1033.
    PubMed         Abstract available
    
    
26. 
    Beethoven's Deafness.
    JAMA. 2021;326:1075.
    PubMed        
    
    
27. CANTOR A, Dana T, Griffin JC, Nelson HD, et al
    Screening for Chlamydial and Gonococcal Infections: Updated Evidence Report and Systematic Review for the US Preventive Services Task Force.
    JAMA. 2021;326:957-966.
    PubMed         Abstract available
    
    

    
    Lancet

28. LOW N, Hocking JS, van Bergen J
    The changing landscape of chlamydia control strategies.
    Lancet. 2021 Sep 22. pii: S0140-6736(21)02002.
    PubMed        
    
    

    
    Minerva Pediatr (Torino)

29. SZIGETI A, Smith-Norowitz TA, Weaver D, Joks R, et al
    Chlamydia pneumoniae-induced interferon gamma responses in peripheral blood mononuclear cells from pediatric asthma patients: effect of inhaled corticosteroids.
    Minerva Pediatr (Torino). 2021 Sep 30. pii: S2724-5276.21.06232.
    PubMed        
    
    

    
    N Engl J Med

30. BOWEN VB, McDonald R, Grey JA, Kimball A, et al
    High Congenital Syphilis Case Counts among U.S. Infants Born in 2020.
    N Engl J Med. 2021;385:1144-1145.
    PubMed        
    
    
31. CHOWDHURY J, Patel R, Chambers H
    Oral versus Intravenous Antibiotics for Endocarditis.
    N Engl J Med. 2021;385:1141-1143.
    PubMed        
    
    
32. PATEL PD, Patel P, Liang Y, Meiring JE, et al
    Safety and Efficacy of a Typhoid Conjugate Vaccine in Malawian Children.
    N Engl J Med. 2021;385:1104-1115.
    PubMed         Abstract available
    
    

    
    Neurology

33. MARTINO D
    Author Response: Association of Group A Streptococcus Exposure and Exacerbations of Chronic Tic Disorders: A Multinational Prospective Cohort Study.
    Neurology. 2021;97:654.
    PubMed        
    
    
34. UBHI T, Chang K, Gupta R, Cunningham J, et al
    Reader Response: Association of Group A Streptococcus Exposure and Exacerbations of Chronic Tic Disorders: A Multinational Prospective Cohort Study.
    Neurology. 2021;97:653-654.
    PubMed        
    
    
35. LEWIS A, Galetta S
    Editors' Note: Association of Group A Streptococcus Exposure and Exacerbations of Chronic Tic Disorders: A Multinational Prospective Cohort Study.
    Neurology. 2021;97:652-653.
    PubMed        
    
    

    
    Pediatrics

36. CARPAY NC, Vlieger AM, van Elburg RM
    RE: Intrapartum Group B Streptococcal Prophylaxis and Childhood Allergic Disorders.
    Pediatrics. 2021 Sep 30. pii: peds.2021-053008A. doi: 10.1542/peds.2021-053008.
    PubMed        
    
    

    
    PLoS Biol

37. SUEIRO-OLIVARES M, Scott J, Gago S, Petrovic D, et al
    Fungal and host protein persulfidation are functionally correlated and modulate both virulence and antifungal response.
    PLoS Biol. 2021;19:e3001247.
    PubMed         Abstract available
    
    

    
    PLoS Comput Biol

38. GOSCE L, Abou Jaoude GJ, Kedziora DJ, Benedikt C, et al
    Optima TB: A tool to help optimally allocate tuberculosis spending.
    PLoS Comput Biol. 2021;17:e1009255.
    PubMed         Abstract available
    
    

    
    PLoS Genet

39. VU BG, Stamnes MA, Li Y, Rogers PD, et al
    The Candida glabrata Upc2A transcription factor is a global regulator of antifungal drug resistance pathways.
    PLoS Genet. 2021;17:e1009582.
    PubMed         Abstract available
    
    

    
    PLoS One

40. BJORKQVIST O, Rangel I, Serrander L, Magnusson C, et al
    Faecalibacterium prausnitzii increases following fecal microbiota transplantation in recurrent Clostridioides difficile infection.
    PLoS One. 2021;16:e0249861.
    PubMed         Abstract available
    
    
41. YU G, Shen Y, Xu X, Lin L, et al
    Nucleic acid amplification techniques for rapid diagnosis of nontuberculous mycobacteria: A protocol of systematic review and meta-analysis.
    PLoS One. 2021;16:e0250470.
    PubMed         Abstract available
    
    
42. MARASPIN V, Ogrinc K, Rojko T, Bogovic P, et al
    Characteristics of spirochetemic patients with a solitary erythema migrans skin lesion in Europe.
    PLoS One. 2021;16:e0250198.
    PubMed         Abstract available
    
    
43. WALL KM, Nyombayire J, Parker R, Ingabire R, et al
    Etiologies of genital inflammation and ulceration in symptomatic Rwandan men and women responding to radio promotions of free screening and treatment services.
    PLoS One. 2021;16:e0250044.
    PubMed         Abstract available
    
    
44. GAL A, Barko PC, Biggs PJ, Gedye KR, et al
    One dog's waste is another dog's wealth: A pilot study of fecal microbiota transplantation in dogs with acute hemorrhagic diarrhea syndrome.
    PLoS One. 2021;16:e0250344.
    PubMed         Abstract available
    
    
45. MENDES RJ, Luz JP, Santos C, Tavares F, et al
    CRISPR genotyping as complementary tool for epidemiological surveillance of Erwinia amylovora outbreaks.
    PLoS One. 2021;16:e0250280.
    PubMed         Abstract available
    
    
46. HOSHI H, Chu PS, Yoshida A, Taniki N, et al
    Vulnerability to recurrent episodes of acute decompensation/acute-on-chronic liver failure characterizes those triggered by indeterminate precipitants in patients with liver cirrhosis.
    PLoS One. 2021;16:e0250062.
    PubMed         Abstract available
    
    
47. GUPTA A, Bansal M, Liyanage R, Upadhyay A, et al
    Sodium butyrate modulates chicken macrophage proteins essential for Salmonella Enteritidis invasion.
    PLoS One. 2021;16:e0250296.
    PubMed         Abstract available
    
    
48. AYENEW Z, Tigabu E, Syoum E, Ebrahim S, et al
    Multidrug resistance pattern of Acinetobacter species isolated from clinical specimens referred to the Ethiopian Public Health Institute: 2014 to 2018 trend anaylsis.
    PLoS One. 2021;16:e0250896.
    PubMed         Abstract available
    
    
49. BALJINNYAM T, Radnaa E, Ouellette CM, Nelson C, et al
    High molecular weight sodium hyaluronate improves survival of syndecan-1-deficient septic mice by inhibiting neutrophil migration.
    PLoS One. 2021;16:e0250327.
    PubMed         Abstract available
    
    
50. VAVALA G, Goldbeck C, Bristow CC, Stafylis C, et al
    Adolescents may accurately self-collect pharyngeal and rectal clinical specimens for the detection of Chlamydia trachomatis and Neisseria gonorrhoeae infection.
    PLoS One. 2021;16:e0255878.
    PubMed         Abstract available
    
    
51. KEIZER EM, Valdes ID, Forn-Cuni G, Klijn E, et al
    Correction: Variation of virulence of five Aspergillus fumigatus isolates in four different infection models.
    PLoS One. 2021;16:e0258072.
    PubMed         Abstract available
    
    
52. LARSSON FM, Nielsen A, Briones-Vozmediano E, Stjarnfeldt J, et al
    Indifferent, ambiguous, or proactive? Young men's discourses on health service utilization for Chlamydia trachomatis detection in Stockholm, Sweden: A qualitative study.
    PLoS One. 2021;16:e0257402.
    PubMed         Abstract available
    
    
53. NAVARRO-TORNE A, Curcio D, Moisi JC, Jodar L, et al
    Burden of invasive group B Streptococcus disease in non-pregnant adults: A systematic review and meta-analysis.
    PLoS One. 2021;16:e0258030.
    PubMed         Abstract available
    
    
54. ZVONAREVA O, Witte S, Kabanets N, Filinyuk O, et al
    Adolescents in a tuberculosis hospital: Qualitative study of how relationships with doctors, caregivers, and peers mediate their mental wellbeing.
    PLoS One. 2021;16:e0257379.
    PubMed         Abstract available
    
    
55. TAMENE W, Abebe M, Wassie L, Mollalign H, et al
    PDL1 expression on monocytes is associated with plasma cytokines in Tuberculosis and HIV.
    PLoS One. 2021;16:e0258122.
    PubMed         Abstract available
    
    
56. RUESS RW, Winton LM, Adams GC
    Widespread mortality of trembling aspen (Populus tremuloides) throughout interior Alaskan boreal forests resulting from a novel canker disease.
    PLoS One. 2021;16:e0250078.
    PubMed         Abstract available
    
    

    
    Proc Natl Acad Sci U S A

57. BARBIERI R
    Origin, transmission, and evolution of plague over 400 y in Europe.
    Proc Natl Acad Sci U S A. 2021;118.
    PubMed        
    
    

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