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Bacterial Infections and Mycoses

Free Subscription 18.02.2019 2 Antimicrob Agents Chemother 3 Clin Infect Dis 3 Eur J Clin Microbiol Infect Dis 1 Internist (Berl) 8 J Antimicrob Chemother 1 J Bacteriol 2 J Clin Microbiol 2 J Infect Dis 1 J Med Chem 13 J Med Microbiol 2 JAMA 2 Lancet Infect Dis 1 MMWR Morb Mortal Wkly Rep 1 Nature 2 PLoS Comput Biol 1 PLoS Genet 8 PLoS Negl Trop Dis 5 PLoS One 14 PLoS Pathog 2 Proc Natl Acad Sci U S A

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Single Articles

Antimicrob Agents Chemother

1. ROBERTSON GT, Ektnitphong VA, Scherman MS, McNeil MB, et al
   Efficacy and improved resistance potential of a cofactor-independent InhA inhibitor of Mycobacterium tuberculosis in a C3HeB/FeJ mouse model.
   Antimicrob Agents Chemother. 2019 Feb 11. pii: AAC.02071.
   PubMed     Text format     Abstract available
   
   
2. KAUSHIK A, Ammerman NC, Tyagi S, Saini V, et al
   Activity of a long-acting injectable bedaquiline formulation in a paucibacillary mouse model of latent tuberculosis infection.
   Antimicrob Agents Chemother. 2019 Feb 11. pii: AAC.00007.
   PubMed     Text format     Abstract available
   
   

   
   Clin Infect Dis

3. TAN X, Coureuil M, Ramond E, Euphrasie D, et al
   Chronic Staphylococcus aureus lung infection correlates with proteogenomic and metabolic adaptations leading to an increased intracellular persistence.
   Clin Infect Dis. 2019 Feb 7. pii: 5308510. doi: 10.1093.
   PubMed     Text format     Abstract available
   
   
4. BULABULA ANH, Nelson JA, Musafiri EM, Machekano R, et al
   Prevalence, Predictors, and Successful Treatment Outcomes of Xpert MTB/RIF-identified Rifampicin-resistant Tuberculosis in Post-conflict Eastern Democratic Republic of the Congo, 2012-2017: A Retrospective Province-Wide Cohort Study.
   Clin Infect Dis. 2019 Feb 13. pii: 5316466. doi: 10.1093/cid/ciy1105.
   PubMed     Text format     Abstract available
   
   
5. INAGAKI K, Lucar J, Blackshear C, Hobbs CV, et al
   Methicillin-Susceptible and Methicillin-Resistant Staphylococcus aureus bacteremia - Nationwide Estimates of 30-day Readmission, In-hospital Mortality, Length of Stay, and Cost in the US.
   Clin Infect Dis. 2019 Feb 11. pii: 5315481. doi: 10.1093.
   PubMed     Text format     Abstract available
   
   

   
   Eur J Clin Microbiol Infect Dis

6. HAIKO J, Saeedi B, Bagger G, Karpati F, et al
   Coexistence of Candida species and bacteria in patients with cystic fibrosis.
   Eur J Clin Microbiol Infect Dis. 2019 Feb 9. pii: 10.1007/s10096-019-03493.
   PubMed     Text format     Abstract available
   
   
7. ARGUDIN MA, Youzaga S, Dodemont M, Heinrichs A, et al
   Detection of optrA-positive enterococci clinical isolates in Belgium.
   Eur J Clin Microbiol Infect Dis. 2019 Feb 15. pii: 10.1007/s10096-019-03504.
   PubMed     Text format    
   
   
8. MA Y, Che NY, Liu YH, Shu W, et al
   The joint impact of smoking plus alcohol drinking on treatment of pulmonary tuberculosis.
   Eur J Clin Microbiol Infect Dis. 2019 Feb 15. pii: 10.1007/s10096-019-03489.
   PubMed     Text format     Abstract available
   
   

   
   Internist (Berl)

9. BROCKHAUS L, Brune J, Battegay R, Gerull S, et al
   [Disseminated tuberculosis during induction chemotherapy in acute myeloid leukemia].
   Internist (Berl). 2019 Feb 14. pii: 10.1007/s00108-019-0565.
   PubMed     Text format     Abstract available
   
   

   
   J Antimicrob Chemother

10. SADER HS, Mendes RE, Pfaller MA, Flamm RK, et al
    Antimicrobial activity of dalbavancin tested against Gram-positive organisms isolated from patients with infective endocarditis in US and European medical centres.
    J Antimicrob Chemother. 2019 Feb 7. pii: 5309029. doi: 10.1093.
    PubMed     Text format     Abstract available
    
    
11. PAUL S, Singh S, Chakrabarti A, Rudramurthy SM, et al
    Stable isotope labelling: an approach for MALDI-TOF MS-based rapid detection of fluconazole resistance in Candida tropicalis.
    J Antimicrob Chemother. 2019 Feb 6. pii: 5307967. doi: 10.1093.
    PubMed     Text format     Abstract available
    
    
12. WU T, Meyer K, Harrington AT, Danziger LH, et al
    In vitro activity of oritavancin alone or in combination against vancomycin-susceptible and -resistant enterococci.
    J Antimicrob Chemother. 2019 Feb 8. pii: 5310330. doi: 10.1093.
    PubMed     Text format     Abstract available
    
    
13. NIKOLAYEVSKYY V, Maurer FP, Holicka Y, Taylor L, et al
    Novel external quality assurance scheme for drug susceptibility testing of non-tuberculous mycobacteria: a multicentre pilot study.
    J Antimicrob Chemother. 2019 Feb 11. pii: 5315667. doi: 10.1093.
    PubMed     Text format     Abstract available
    
    
14. LAMOTH F, Mercier T, Andre P, Pagani JL, et al
    Isavuconazole brain penetration in cerebral aspergillosis.
    J Antimicrob Chemother. 2019 Feb 11. pii: 5315664. doi: 10.1093.
    PubMed     Text format    
    
    
15. SINGH A, Singh PK, de Groot T, Kumar A, et al
    Emergence of clonal fluconazole-resistant Candida parapsilosis clinical isolates in a multicentre laboratory-based surveillance study in India.
    J Antimicrob Chemother. 2019 Feb 11. pii: 5315659. doi: 10.1093.
    PubMed     Text format     Abstract available
    
    
16. DAS S, Garg T, Chopra S, Dasgupta A, et al
    Repurposing disulfiram to target infections caused by non-tuberculous mycobacteria.
    J Antimicrob Chemother. 2019 Feb 7. pii: 5309031. doi: 10.1093.
    PubMed     Text format     Abstract available
    
    
17. BA X, Kalmar L, Hadjirin NF, Kerschner H, et al
    Truncation of GdpP mediates beta-lactam resistance in clinical isolates of Staphylococcus aureus.
    J Antimicrob Chemother. 2019 Feb 12. pii: 5316432. doi: 10.1093.
    PubMed     Text format     Abstract available
    
    

    
    J Bacteriol

18. MOULIN P, Rong V, Ribeiro E Silva A, Pederick VG, et al
    Defining the role of the Streptococcus agalactiae Sht-family proteins in zinc acquisition and complement evasion.
    J Bacteriol. 2019 Feb 11. pii: JB.00757-18. doi: 10.1128/JB.00757.
    PubMed     Text format     Abstract available
    
    

    
    J Clin Microbiol

19. WELSH RM, Sexton DJ, Forsberg K, Vallabhaneni S, et al
    Insights into the Unique Nature of the East Asian Clade of the Emerging Pathogenic Yeast, Candida auris.
    J Clin Microbiol. 2019 Feb 13. pii: JCM.00007-19. doi: 10.1128/JCM.00007.
    PubMed     Text format     Abstract available
    
    
20. TICKLER IA, Tenover FC, Dewell S, Le VM, et al
    Streptococcus agalactiae strains with chromosomal deletions evade detection with molecular methods.
    J Clin Microbiol. 2019 Feb 13. pii: JCM.02040-18. doi: 10.1128/JCM.02040.
    PubMed     Text format     Abstract available
    
    

    
    J Infect Dis

21. LACHMANDAS E, Eckold C, Bohme J, Koeken VACM, et al
    Metformin alters human host responses to Mycobacterium tuberculosis in healthy subjects.
    J Infect Dis. 2019 Feb 12. pii: 5316196. doi: 10.1093.
    PubMed     Text format     Abstract available
    
    
22. ADAMS KN, Verma AK, Gopalaswamy R, Adikesavalu H, et al
    Diverse Clinical Isolates of Mycobacterium tuberculosis Develop Macrophage-Induced Rifampin Tolerance.
    J Infect Dis. 2019 Feb 7. pii: 5308873. doi: 10.1093.
    PubMed     Text format     Abstract available
    
    

    
    J Med Chem

23. TU J, Li Z, Jiang Y, Ji C, et al
    Discovery of Carboline Derivatives as Potent Antifungal Agents for the Treatment of Cryptococcal Meningitis.
    J Med Chem. 2019 Feb 12. doi: 10.1021/acs.jmedchem.8b01598.
    PubMed     Text format     Abstract available
    
    

    
    J Med Microbiol

24. BEN FRAJ I, Kechrid A, Guillot S, Bouchez V, et al
    Pertussis epidemiology in Tunisian infants and children and characterization of Bordetella pertussis isolates: results of a 9-year surveillance study, 2007 to 2016.
    J Med Microbiol. 2019;68:241-247.
    PubMed     Text format     Abstract available
    
    
25. UECHI K, Tada T, Kuwahara-Arai K, Sekiguchi JI, et al
    An improved carbapenem inactivation method, CIMTrisII, for carbapenemase production by Gram-negative pathogens.
    J Med Microbiol. 2019;68:124-131.
    PubMed     Text format     Abstract available
    
    
26. KAYMAN T, Abay S, Aydin F, Sahin O, et al
    Antibiotic resistance of Campylobacter jejuni isolates recovered from humans with diarrhoea in Turkey.
    J Med Microbiol. 2018 Dec 12. doi: 10.1099/jmm.0.000890.
    PubMed     Text format     Abstract available
    
    
27. GONG J, Zhang M, Wang Y, Li R, et al
    Population Structure and Genetic Diversity of Sporothrix globosa in China According to 10 Novel Microsatellite Loci.
    J Med Microbiol. 2019;68:248-254.
    PubMed     Text format     Abstract available
    
    
28. COTTELL JL, Webber MA
    Experiences in fosfomycin susceptibility testing and resistance mechanism determination in Escherichia coli from urinary tract infections in the UK.
    J Med Microbiol. 2018 Dec 13. doi: 10.1099/jmm.0.000901.
    PubMed     Text format     Abstract available
    
    
29. O'HARA RW, Jenks PJ, Emery M, Upton M, et al
    Rapid detection of extra-intestinal pathogenic Escherichia coli multi-locus sequence type 127 using a specific PCR assay.
    J Med Microbiol. 2019;68:188-196.
    PubMed     Text format     Abstract available
    
    
30. GAMBIEZ C, Garet C, Choquet M, Decroix V, et al
    Limited efficacy of nontreponemal test combined with treponemal test in the initial syphilis screening algorithm.
    J Med Microbiol. 2018 Dec 20. doi: 10.1099/jmm.0.000886.
    PubMed     Text format     Abstract available
    
    
31. SLOAN TJ, Turton JC, Tyson J, Musgrove A, et al
    Examining diabetic heel ulcers through an ecological lens: microbial community dynamics associated with healing and infection.
    J Med Microbiol. 2019;68:230-240.
    PubMed     Text format     Abstract available
    
    
32. OTA Y, Furuhashi K, Nanba T, Yamanaka K, et al
    A rapid and simple detection method for phenotypic antimicrobial resistance in Escherichia coli by loop-mediated isothermal amplification.
    J Med Microbiol. 2019 Jan 9. doi: 10.1099/jmm.0.000903.
    PubMed     Text format     Abstract available
    
    
33. CHEN X, Zou Q, Zhang W, Wang R, et al
    Clinical features and microbiological characteristics of hospital- and community-onset Escherichia coli bloodstream infection.
    J Med Microbiol. 2019;68:178-187.
    PubMed     Text format     Abstract available
    
    
34. DESHAZER D, Lovett S, Richardson J, Koroleva G, et al
    Bacteriophage-associated genes responsible for the widely divergent phenotypes of variants of Burkholderia pseudomallei strain MSHR5848.
    J Med Microbiol. 2019;68:263-278.
    PubMed     Text format     Abstract available
    
    
35. ZHANG H, Zheng L, Zhao J, Ding S, et al
    Investigation of fluoroquinolone resistance mechanism in Mycoplasma hominis isolated from urogenital samples in a Chinese hospital.
    J Med Microbiol. 2019 Jan 11. doi: 10.1099/jmm.0.000913.
    PubMed     Text format     Abstract available
    
    
36. KATO A, Miyata I, Tanaka Y, Oishi T, et al
    LAMP-based assay can rectify the diagnosis of Yersinia pseudotuberculosis infections otherwise missed by serology.
    J Med Microbiol. 2019;68:143-147.
    PubMed     Text format     Abstract available
    
    

    
    JAMA

37. GRENNAN D
    Diabetic Foot Ulcers.
    JAMA. 2019;321:114.
    PubMed     Text format    
    
    
38. HAMPTON T
    Optimized Arylomycins May Help Address Antibiotic Resistance.
    JAMA. 2019;321:21-22.
    PubMed     Text format    
    
    

    
    Lancet Infect Dis

39. ACQUAH R, Furin J
    Universal regimens or universal access to drug susceptibility testing for tuberculosis?
    Lancet Infect Dis. 2019 Feb 7. pii: S1473-3099(18)30742.
    PubMed     Text format    
    
    
40. ZURCHER K, Ballif M, Fenner L, Borrell S, et al
    Drug susceptibility testing and mortality in patients treated for tuberculosis in high-burden countries: a multicentre cohort study.
    Lancet Infect Dis. 2019 Feb 7. pii: S1473-3099(18)30673.
    PubMed     Text format     Abstract available
    
    

    
    MMWR Morb Mortal Wkly Rep

41. KIDD SE, Grey JA, Torrone EA, Weinstock HS, et al
    Increased Methamphetamine, Injection Drug, and Heroin Use Among Women and Heterosexual Men with Primary and Secondary Syphilis - United States, 2013-2017.
    MMWR Morb Mortal Wkly Rep. 2019;68:144-148.
    PubMed     Text format     Abstract available
    
    

    
    Nature

42. 
    Genomics can help to monitor cholera.
    Nature. 2019;565:397-398.
    PubMed     Text format    
    
    

    
    PLoS Comput Biol

43. CORI A, Nouvellet P, Garske T, Bourhy H, et al
    A graph-based evidence synthesis approach to detecting outbreak clusters: An application to dog rabies.
    PLoS Comput Biol. 2018;14:e1006554.
    PubMed     Text format     Abstract available
    
    
44. MORADIGARAVAND D, Palm M, Farewell A, Mustonen V, et al
    Prediction of antibiotic resistance in Escherichia coli from large-scale pan-genome data.
    PLoS Comput Biol. 2018;14:e1006258.
    PubMed     Text format     Abstract available
    
    

    
    PLoS Genet

45. SILAO FGS, Ward M, Ryman K, Wallstrom A, et al
    Mitochondrial proline catabolism activates Ras1/cAMP/PKA-induced filamentation in Candida albicans.
    PLoS Genet. 2019;15:e1007976.
    PubMed     Text format     Abstract available
    
    

    
    PLoS Negl Trop Dis

46. GIACANI L, Bernstein LR, Haynes AM, Godornes BC, et al
    Topical treatment with gallium maltolate reduces Treponema pallidum subsp. pertenue burden in primary experimental lesions in a rabbit model of yaws.
    PLoS Negl Trop Dis. 2019;13:e0007076.
    PubMed     Text format     Abstract available
    
    
47. VIDAL RM, Muhsen K, Tennant SM, Svennerholm AM, et al
    Colonization factors among enterotoxigenic Escherichia coli isolates from children with moderate-to-severe diarrhea and from matched controls in the Global Enteric Multicenter Study (GEMS).
    PLoS Negl Trop Dis. 2019;13:e0007037.
    PubMed     Text format     Abstract available
    
    
48. HURLIMANN E, Houngbedji CA, Yapi RB, N'Dri PB, et al
    Antagonistic effects of Plasmodium-helminth co-infections on malaria pathology in different population groups in Cote d'Ivoire.
    PLoS Negl Trop Dis. 2019;13:e0007086.
    PubMed     Text format     Abstract available
    
    
49. LEDNICKY JA, White SK, Mavian CN, El Badry MA, et al
    Emergence of Madariaga virus as a cause of acute febrile illness in children, Haiti, 2015-2016.
    PLoS Negl Trop Dis. 2019;13:e0006972.
    PubMed     Text format     Abstract available
    
    
50. SINGH R, Singh B, Mahato S
    Community knowledge, attitude, and perceived stigma of leprosy amongst community members living in Dhanusha and Parsa districts of Southern Central Nepal.
    PLoS Negl Trop Dis. 2019;13:e0007075.
    PubMed     Text format     Abstract available
    
    
51. RAVI A, Ereqat S, Al-Jawabreh A, Abdeen Z, et al
    Metagenomic profiling of ticks: Identification of novel rickettsial genomes and detection of tick-borne canine parvovirus.
    PLoS Negl Trop Dis. 2019;13:e0006805.
    PubMed     Text format     Abstract available
    
    
52. DIRO E, Blesson S, Edwards T, Ritmeijer K, et al
    A randomized trial of AmBisome monotherapy and AmBisome and miltefosine combination to treat visceral leishmaniasis in HIV co-infected patients in Ethiopia.
    PLoS Negl Trop Dis. 2019;13:e0006988.
    PubMed     Text format     Abstract available
    
    
53. ADETUNJI SA, Ramirez G, Foster MJ, Arenas-Gamboa AM, et al
    A systematic review and meta-analysis of the prevalence of osteoarticular brucellosis.
    PLoS Negl Trop Dis. 2019;13:e0007112.
    PubMed     Text format     Abstract available
    
    

    
    PLoS One

54. VICETTI MIGUEL CP, Mejias A, Leber A, Sanchez PJ, et al
    A decade of antimicrobial resistance in Staphylococcus aureus: A single center experience.
    PLoS One. 2019;14:e0212029.
    PubMed     Text format     Abstract available
    
    
55. ERCIBENGOA M, Alonso M, Vicente D, Morales M, et al
    Utility of MALDI-TOF MS as a new tool for Streptococcus pneumoniae serotyping.
    PLoS One. 2019;14:e0212022.
    PubMed     Text format     Abstract available
    
    
56. ROE WD, Lenting B, Kokosinska A, Hunter S, et al
    Pathology and molecular epidemiology of Mycobacterium pinnipedii tuberculosis in native New Zealand marine mammals.
    PLoS One. 2019;14:e0212363.
    PubMed     Text format     Abstract available
    
    
57. RING SC, Purfield DC, Good M, Breslin P, et al
    Variance components for bovine tuberculosis infection and multi-breed genome-wide association analysis using imputed whole genome sequence data.
    PLoS One. 2019;14:e0212067.
    PubMed     Text format     Abstract available
    
    
58. AFSHAR B, Carless J, Roche A, Balasegaram S, et al
    Surveillance of tuberculosis (TB) cases attributable to relapse or reinfection in London, 2002-2015.
    PLoS One. 2019;14:e0211972.
    PubMed     Text format     Abstract available
    
    

    
    PLoS Pathog

59. TIAN H, Feng Y, Vrancken B, Cazelles B, et al
    Transmission dynamics of re-emerging rabies in domestic dogs of rural China.
    PLoS Pathog. 2018;14:e1007392.
    PubMed     Text format     Abstract available
    
    
60. ZHANG X, Sun H, Cunningham FL, Li L, et al
    Tissue tropisms opt for transmissible reassortants during avian and swine influenza A virus co-infection in swine.
    PLoS Pathog. 2018;14:e1007417.
    PubMed     Text format     Abstract available
    
    
61. HAUSER PM, Cushion MT
    Is sex necessary for the proliferation and transmission of Pneumocystis?
    PLoS Pathog. 2018;14:e1007409.
    PubMed     Text format    
    
    
62. DIAZ CABALLERO J, Clark ST, Wang PW, Donaldson SL, et al
    A genome-wide association analysis reveals a potential role for recombination in the evolution of antimicrobial resistance in Burkholderia multivorans.
    PLoS Pathog. 2018;14:e1007453.
    PubMed     Text format     Abstract available
    
    
63. CIANCARELLA V, Lembo-Fazio L, Paciello I, Bruno AK, et al
    Role of a fluid-phase PRR in fighting an intracellular pathogen: PTX3 in Shigella infection.
    PLoS Pathog. 2018;14:e1007469.
    PubMed     Text format     Abstract available
    
    
64. O'BRIEN VP, Dorsey DA, Hannan TJ, Hultgren SJ, et al
    Host restriction of Escherichia coli recurrent urinary tract infection occurs in a bacterial strain-specific manner.
    PLoS Pathog. 2018;14:e1007457.
    PubMed     Text format     Abstract available
    
    
65. WEDDLE E, Agaisse H
    Principles of intracellular bacterial pathogen spread from cell to cell.
    PLoS Pathog. 2018;14:e1007380.
    PubMed     Text format    
    
    
66. VELLE KB, Campellone KG
    Enteropathogenic E. coli relies on collaboration between the formin mDia1 and the Arp2/3 complex for actin pedestal biogenesis and maintenance.
    PLoS Pathog. 2018;14:e1007485.
    PubMed     Text format     Abstract available
    
    
67. KNIPPEL RJ, Zackular JP, Moore JL, Celis AI, et al
    Heme sensing and detoxification by HatRT contributes to pathogenesis during Clostridium difficile infection.
    PLoS Pathog. 2018;14:e1007486.
    PubMed     Text format     Abstract available
    
    
68. NAUTH T, Huschka F, Schweizer M, Bosse JB, et al
    Visualization of translocons in Yersinia type III protein secretion machines during host cell infection.
    PLoS Pathog. 2018;14:e1007527.
    PubMed     Text format     Abstract available
    
    
69. CERQUEIRA DM, Gomes MTR, Silva ALN, Rungue M, et al
    Guanylate-binding protein 5 licenses caspase-11 for Gasdermin-D mediated host resistance to Brucella abortus infection.
    PLoS Pathog. 2018;14:e1007519.
    PubMed     Text format     Abstract available
    
    
70. LOPEZ-JIMENEZ AT, Cardenal-Munoz E, Leuba F, Gerstenmaier L, et al
    The ESCRT and autophagy machineries cooperate to repair ESX-1-dependent damage at the Mycobacterium-containing vacuole but have opposite impact on containing the infection.
    PLoS Pathog. 2018;14:e1007501.
    PubMed     Text format     Abstract available
    
    
71. RAMOS Y, Rocha J, Hael AL, van Gestel J, et al
    PolyGlcNAc-containing exopolymers enable surface penetration by non-motile Enterococcus faecalis.
    PLoS Pathog. 2019;15:e1007571.
    PubMed     Text format     Abstract available
    
    
72. GOMES MC, Tasrini Y, Subramoni S, Agnoli K, et al
    The afc antifungal activity cluster, which is under tight regulatory control of ShvR, is essential for transition from intracellular persistence of Burkholderia cenocepacia to acute pro-inflammatory infection.
    PLoS Pathog. 2018;14:e1007473.
    PubMed     Text format     Abstract available
    
    

    
    Proc Natl Acad Sci U S A

73. TEDIJANTO C, Olesen SW, Grad YH, Lipsitch M, et al
    Estimating the proportion of bystander selection for antibiotic resistance among potentially pathogenic bacterial flora.
    Proc Natl Acad Sci U S A. 2018;115:E11988-E11995.
    PubMed     Text format     Abstract available
    
    
74. ZELLA D, Curreli S, Benedetti F, Krishnan S, et al
    Mycoplasma promotes malignant transformation in vivo, and its DnaK, a bacterial chaperon protein, has broad oncogenic properties.
    Proc Natl Acad Sci U S A. 2018;115:E12005-E12014.
    PubMed     Text format     Abstract available
    
    

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