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16.07.2018

1 Am J Clin Pathol
1 Am J Trop Med Hyg
4 Antimicrob Agents Chemother
1 Biochemistry
1 BMC Pediatr
1 Clin Infect Dis
1 Diagn Microbiol Infect Dis
5 J Antimicrob Chemother
1 J Bacteriol
1 J Biol Chem
2 J Clin Microbiol
1 J Infect Dis
3 J Med Microbiol
2 JAMA
3 Lancet Infect Dis
4 Lancet Respir Med
2 N Engl J Med
1 Pediatrics
1 PLoS Comput Biol
1 PLoS Genet
1 PLoS Med
16 PLoS Negl Trop Dis
19 PLoS One
4 PLoS Pathog
2 Science


  Retrieve available abstracts of this week’s articles:
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Single Articles


    Am J Clin Pathol

  1. ARBEFEVILLE S, Nelson K, Thonen-Kerr E, Ferrieri P, et al
    Prospective Postimplementation Study of Solana Group A Streptococcal Nucleic Acid Amplification Test vs Conventional Throat Culture.
    Am J Clin Pathol. 2018 Jul 5. pii: 5049151. doi: 10.1093.
    PubMed     Text format     Abstract available


    Am J Trop Med Hyg

  2. SERAPHIN MN, Didelot X, Nolan DJ, May JR, et al
    Genomic Investigation of a Mycobacterium tuberculosis Outbreak Involving Prison and Community Cases in Florida, United States.
    Am J Trop Med Hyg. 2018 Jul 9. doi: 10.4269/ajtmh.17-0700.
    PubMed     Text format     Abstract available


    Antimicrob Agents Chemother

  3. HOYER AR, Johnson CJ, Hoyer MR, Kernien JF, et al
    Echinocandin treatment of Candida albicans biofilms enhances neutrophil extracellular trap (NET) formation.
    Antimicrob Agents Chemother. 2018 Jul 9. pii: AAC.00797.
    PubMed     Text format     Abstract available

  4. WIEDERHOLD NP, Najvar LK, Garvey EP, Brand SR, et al
    The Fungal Cyp-51 Inhibitor VT-1129 is Efficacious in an Experimental Model of Cryptococcal Meningitis.
    Antimicrob Agents Chemother. 2018 Jul 9. pii: AAC.01071.
    PubMed     Text format     Abstract available

  5. PIETERMAN ED, Te Brake LHM, de Knegt GJ, van der Meijden A, et al
    Assessment of the additional value of verapamil to a moxifloxacin and linezolid combination regimen in a murine tuberculosis model.
    Antimicrob Agents Chemother. 2018 Jul 9. pii: AAC.01354.
    PubMed     Text format     Abstract available

  6. AGUILAR-PEREZ C, Gracia B, Rodrigues L, Vitoria A, et al
    Synergy between circular bacteriocin AS-48 and ethambutol against Mycobacterium tuberculosis.
    Antimicrob Agents Chemother. 2018 Jul 9. pii: AAC.00359.
    PubMed     Text format     Abstract available


    Biochemistry

  7. PANKRATOVA G, Leech D, Gorton L, Hederstedt L, et al
    Extracellular Electron Transfer by the Gram-positive Bacterium Enterococcus faecalis.
    Biochemistry. 2018 Jul 10. doi: 10.1021/acs.biochem.8b00600.
    PubMed     Text format     Abstract available


    BMC Pediatr

  8. NICOLINI G, Borellini M, Loizzo V, Creti R, et al
    Group B streptococcus late-onset disease,contaminated breast milk and mothers persistently GBS negative: report of 3cases.
    BMC Pediatr. 2018;18:214.
    PubMed     Text format     Abstract available


    Clin Infect Dis

  9. HOUBEN RMGJ, Lalli M, Kranzer K, Menzies NA, et al
    What if they don't have tuberculosis? The consequences and trade-offs involved in false-positive diagnoses of tuberculosis.
    Clin Infect Dis. 2018 Jul 5. pii: 5049169. doi: 10.1093.
    PubMed     Text format     Abstract available


    Diagn Microbiol Infect Dis

  10. BHOWMICK T, Kirn TJ, Hetherington F, Takavarasha S, et al
    Collaboration between an antimicrobial stewardship team and the microbiology laboratory can shorten time to directed antibiotic therapy for methicillin-susceptible staphylococcal bacteremia and to discontinuation of antibiotics for coagulase-negative
    Diagn Microbiol Infect Dis. 2018 May 29. pii: S0732-8893(18)30177.
    PubMed     Text format     Abstract available


    J Antimicrob Chemother

  11. WHITFIELD MG, Warren RM, Mathys V, Scott L, et al
    The potential use of rifabutin for treatment of patients diagnosed with rifampicin-resistant tuberculosis.
    J Antimicrob Chemother. 2018 Jul 5. pii: 5049577. doi: 10.1093.
    PubMed     Text format     Abstract available

  12. ADAM HJ, Golden AR, Karlowsky JA, Baxter MR, et al
    Analysis of multidrug resistance in the predominant Streptococcus pneumoniae serotypes in Canada: the SAVE study, 2011-15.
    J Antimicrob Chemother. 2018;73.
    PubMed     Text format     Abstract available

  13. ZHANEL GG, Adam HJ
    Introduction to the SAVE study (2011-15): Streptococcus pneumoniae serotyping and antimicrobial susceptibility: Assessment for Vaccine Efficacy in Canada after the introduction of PCV-13.
    J Antimicrob Chemother. 2018;73.
    PubMed     Text format     Abstract available

  14. KARLOWSKY JA, Adam HJ, Golden AR, Baxter MR, et al
    Antimicrobial susceptibility testing of invasive isolates of Streptococcus pneumoniae from Canadian patients: the SAVE study, 2011-15.
    J Antimicrob Chemother. 2018;73.
    PubMed     Text format     Abstract available

  15. GOLDEN AR, Adam HJ, Karlowsky JA, Baxter M, et al
    Molecular characterization of predominant Streptococcus pneumoniae serotypes causing invasive infections in Canada: the SAVE study, 2011-15.
    J Antimicrob Chemother. 2018;73.
    PubMed     Text format     Abstract available


    J Bacteriol

  16. MANIAS DA, Dunny GM
    Expression of Adhesive Pili and the Collagen-binding Adhesin ACE is Activated by ArgR Family Transcription Factors in Enterococcus faecalis.
    J Bacteriol. 2018 Jul 9. pii: JB.00269-18. doi: 10.1128/JB.00269.
    PubMed     Text format     Abstract available


    J Biol Chem

  17. FRICK IM, Shannon O, Neumann A, Karlsson C, et al
    Streptococcal inhibitor of complement, protein SIC, modulates fibrinolysis and enhances bacterial survival within fibrin clots.
    J Biol Chem. 2018 Jul 12. pii: RA118.001988. doi: 10.1074/jbc.RA118.001988.
    PubMed     Text format     Abstract available


    J Clin Microbiol

  18. DE VOS M, Derendinger B, Dolby T, Simpson J, et al
    Diagnostic accuracy and utility of a new molecular assay for multidrug-resistant tuberculosis: FluoroType MTBDR.
    J Clin Microbiol. 2018 Jul 5. pii: JCM.00531-18. doi: 10.1128/JCM.00531.
    PubMed     Text format     Abstract available

  19. WALTERS E, Scott L, Nabeta P, Demers AM, et al
    Molecular detection of Mycobacterium tuberculosis from stool in young children using a novel centrifugation-free processing method.
    J Clin Microbiol. 2018 Jul 11. pii: JCM.00781-18. doi: 10.1128/JCM.00781.
    PubMed     Text format     Abstract available


    J Infect Dis

  20. GEBREMICAEL G, Kassa D, Quinten E, Alemayehu Y, et al
    Host gene expression kinetics during treatment of tuberculosis in HIV-coinfected individuals is independent of HAART therapy.
    J Infect Dis. 2018 Jul 2. pii: 5047436. doi: 10.1093.
    PubMed     Text format     Abstract available


    J Med Microbiol

  21. RECIO R, Branas P, Martinez MT, Chaves F, et al
    Effect of respiratory Achromobacter spp. infection on pulmonary function in patients with cystic fibrosis.
    J Med Microbiol. 2018;67:952-956.
    PubMed     Text format     Abstract available

  22. ELGENDY SG, Abdel Hameed MR, El-Mokhtar MA
    Tigecycline resistance among Klebsiella pneumoniae isolated from febrile neutropenic patients.
    J Med Microbiol. 2018;67:972-975.
    PubMed     Text format     Abstract available

  23. CHEN Z, Cheng H, Pan W, Zheng J, et al
    Comparative genome and evolution analysis of the locus of enterocyte effacement from enteropathogenic Escherichia coli Deng and its transcriptional response to ciprofloxacin.
    J Med Microbiol. 2018 Jul 10. doi: 10.1099/jmm.0.000790.
    PubMed     Text format     Abstract available


    JAMA

  24. RUDD KE, Seymour CW, Aluisio AR, Augustin ME, et al
    Association of the Quick Sequential (Sepsis-Related) Organ Failure Assessment (qSOFA) Score With Excess Hospital Mortality in Adults With Suspected Infection in Low- and Middle-Income Countries.
    JAMA. 2018 May 20. pii: 2681801. doi: 10.1001/jama.2018.6229.
    PubMed     Text format     Abstract available


  25. The Sin of Treating Symptoms.
    JAMA. 2018;320:98.
    PubMed     Text format    


    Lancet Infect Dis

  26. BURKI T
    Neglecting childhood tuberculosis "a human rights violation".
    Lancet Infect Dis. 2018;18:723.
    PubMed     Text format    

  27. TRAUER JM, Ragonnet R, McBryde ES
    Appropriate comparisons of tuberculosis latency structures with empiric data.
    Lancet Infect Dis. 2018;18:720-721.
    PubMed     Text format    

  28. WOODHALL SC, Gorwitz RJ, Migchelsen SJ, Gottlieb SL, et al
    Advancing the public health applications of Chlamydia trachomatis serology.
    Lancet Infect Dis. 2018 Jul 5. pii: S1473-3099(18)30159.
    PubMed     Text format     Abstract available


    Lancet Respir Med

  29. RIVA MA, Belingheri M, Cesana G
    Pulmonary tuberculosis in Pope Clement XI.
    Lancet Respir Med. 2018;6:497-498.
    PubMed     Text format    

  30. GUPTA R, Wells CD
    Pan-tuberculosis regimens: re-framing the argument.
    Lancet Respir Med. 2018;6:e28.
    PubMed     Text format    

  31. MITTAL S, Tiwari P, Madan K, Khilnani GC, et al
    Isoniazid-resistant, rifampicin-susceptible tuberculosis in India.
    Lancet Respir Med. 2018;6:e29.
    PubMed     Text format    

  32. SCHNIPPEL K, Ndjeka N, Maartens G, Meintjes G, et al
    Effect of bedaquiline on mortality in South African patients with drug-resistant tuberculosis: a retrospective cohort study.
    Lancet Respir Med. 2018 Jul 9. pii: S2213-2600(18)30235.
    PubMed     Text format     Abstract available


    N Engl J Med

  33. LADIZINSKI B, Piette W
    Disseminated Cutaneous Blastomycosis.
    N Engl J Med. 2018;379:74.
    PubMed     Text format    

  34. NEMES E, Geldenhuys H, Rozot V, Rutkowski KT, et al
    Prevention of M. tuberculosis Infection with H4:IC31 Vaccine or BCG Revaccination.
    N Engl J Med. 2018;379:138-149.
    PubMed     Text format     Abstract available


    Pediatrics

  35. SADEGHIRAD B, Morgan RL, Zeraatkar D, Zea AM, et al
    Human and Bovine Colostrum for Prevention of Necrotizing Enterocolitis: A Meta-analysis.
    Pediatrics. 2018 Jul 10. pii: peds.2018-0767. doi: 10.1542/peds.2018-0767.
    PubMed     Text format     Abstract available


    PLoS Comput Biol

  36. ESTRELA S, Brown SP
    Community interactions and spatial structure shape selection on antibiotic resistant lineages.
    PLoS Comput Biol. 2018;14:e1006179.
    PubMed     Text format     Abstract available


    PLoS Genet

  37. GRATANI FL, Horvatek P, Geiger T, Borisova M, et al
    Regulation of the opposing (p)ppGpp synthetase and hydrolase activities in a bifunctional RelA/SpoT homologue from Staphylococcus aureus.
    PLoS Genet. 2018;14:e1007514.
    PubMed     Text format     Abstract available


    PLoS Med

  38. HARAUSZ EP, Garcia-Prats AJ, Law S, Schaaf HS, et al
    Treatment and outcomes in children with multidrug-resistant tuberculosis: A systematic review and individual patient data meta-analysis.
    PLoS Med. 2018;15:e1002591.
    PubMed     Text format     Abstract available


    PLoS Negl Trop Dis

  39. HE J, Christakos G, Wu J, Cazelles B, et al
    Spatiotemporal variation of the association between climate dynamics and HFRS outbreaks in Eastern China during 2005-2016 and its geographic determinants.
    PLoS Negl Trop Dis. 2018;12:e0006554.
    PubMed     Text format     Abstract available

  40. BALIBAN SM, Curtis B, Toema D, Tennant SM, et al
    Immunogenicity and efficacy following sequential parenterally-administered doses of Salmonella Enteritidis COPS:FliC glycoconjugates in infant and adult mice.
    PLoS Negl Trop Dis. 2018;12:e0006522.
    PubMed     Text format     Abstract available

  41. WHITE SK, Mavian C, Elbadry MA, Beau De Rochars VM, et al
    Detection and phylogenetic characterization of arbovirus dual-infections among persons during a chikungunya fever outbreak, Haiti 2014.
    PLoS Negl Trop Dis. 2018;12:e0006505.
    PubMed     Text format     Abstract available

  42. KORTE LM, Bowen AC, Draper ADK, Davis K, et al
    Scabies and impetigo in Timor-Leste: A school screening study in two districts.
    PLoS Negl Trop Dis. 2018;12:e0006400.
    PubMed     Text format     Abstract available

  43. BWIRE G, Sack DA, Almeida M, Li S, et al
    Molecular characterization of Vibrio cholerae responsible for cholera epidemics in Uganda by PCR, MLVA and WGS.
    PLoS Negl Trop Dis. 2018;12:e0006492.
    PubMed     Text format     Abstract available

  44. PAKOA JG, Soupe-Gilbert ME, Girault D, Takau D, et al
    High incidence of leptospirosis in an observational study of hospital outpatients in Vanuatu highlights the need for improved awareness and diagnostic capacities.
    PLoS Negl Trop Dis. 2018;12:e0006564.
    PubMed     Text format     Abstract available

  45. YEBOAH-MANU D, Aboagye SY, Asare P, Asante-Poku A, et al
    Laboratory confirmation of Buruli ulcer cases in Ghana, 2008-2016.
    PLoS Negl Trop Dis. 2018;12:e0006560.
    PubMed     Text format     Abstract available

  46. BATTY EM, Chaemchuen S, Blacksell S, Richards AL, et al
    Long-read whole genome sequencing and comparative analysis of six strains of the human pathogen Orientia tsutsugamushi.
    PLoS Negl Trop Dis. 2018;12:e0006566.
    PubMed     Text format     Abstract available

  47. PRASAD N, Jenkins AP, Naucukidi L, Rosa V, et al
    Epidemiology and risk factors for typhoid fever in Central Division, Fiji, 2014-2017: A case-control study.
    PLoS Negl Trop Dis. 2018;12:e0006571.
    PubMed     Text format     Abstract available

  48. GEOPOGUI A, Badila CF, Balde MS, Nieba C, et al
    Baseline trachoma prevalence in Guinea: Results of national trachoma mapping in 31 health districts.
    PLoS Negl Trop Dis. 2018;12:e0006585.
    PubMed     Text format     Abstract available

  49. ELLIOTT R, Banerjee T, Santra S
    Zika: An emerging disease requiring prevention and awareness.
    PLoS Negl Trop Dis. 2018;12:e0006486.
    PubMed     Text format    

  50. SCHUENEMANN VJ, Kumar Lankapalli A, Barquera R, Nelson EA, et al
    Historic Treponema pallidum genomes from Colonial Mexico retrieved from archaeological remains.
    PLoS Negl Trop Dis. 2018;12:e0006447.
    PubMed     Text format     Abstract available

  51. MADUT NA, Muwonge A, Nasinyama GW, Muma JB, et al
    The sero-prevalence of brucellosis in cattle and their herders in Bahr el Ghazal region, South Sudan.
    PLoS Negl Trop Dis. 2018;12:e0006456.
    PubMed     Text format     Abstract available

  52. FORNACE KM, Herman LS, Abidin TR, Chua TH, et al
    Exposure and infection to Plasmodium knowlesi in case study communities in Northern Sabah, Malaysia and Palawan, The Philippines.
    PLoS Negl Trop Dis. 2018;12:e0006432.
    PubMed     Text format     Abstract available

  53. RODRIGUES ML, Albuquerque PC
    Searching for a change: The need for increased support for public health and research on fungal diseases.
    PLoS Negl Trop Dis. 2018;12:e0006479.
    PubMed     Text format    

  54. FEODOROVA VA, Lyapina AM, Khizhnyakova MA, Zaitsev SS, et al
    Humoral and cellular immune responses to Yersinia pestis Pla antigen in humans immunized with live plague vaccine.
    PLoS Negl Trop Dis. 2018;12:e0006511.
    PubMed     Text format     Abstract available


    PLoS One

  55. JOENVAARA S, Saraswat M, Kuusela P, Saraswat S, et al
    Quantitative N-glycoproteomics reveals altered glycosylation levels of various plasma proteins in bloodstream infected patients.
    PLoS One. 2018;13:e0195006.
    PubMed     Text format     Abstract available

  56. HEO JY, Seo YB, Choi WS, Lee J, et al
    Incidence and case fatality rates of community-acquired pneumonia and pneumococcal diseases among Korean adults: Catchment population-based analysis.
    PLoS One. 2018;13:e0194598.
    PubMed     Text format     Abstract available

  57. SHAW T, Tellapragada C, Ke V, AuCoin DP, et al
    Performance evaluation of Active Melioidosis Detect-Lateral Flow Assay (AMD-LFA) for diagnosis of melioidosis in endemic settings with limited resources.
    PLoS One. 2018;13:e0194595.
    PubMed     Text format     Abstract available

  58. RIBEIRO AF, Pellini ACG, Kitagawa BY, Marques D, et al
    Severe influenza A(H1N1)pdm09 in pregnant women and neonatal outcomes, State of Sao Paulo, Brazil, 2009.
    PLoS One. 2018;13:e0194392.
    PubMed     Text format     Abstract available

  59. CHAUHAN R, Datzkiw D, Varma Shrivastav S, Shrivastav A, et al
    In silico identification of microRNAs predicted to regulate N-myristoyltransferase and Methionine Aminopeptidase 2 functions in cancer and infectious diseases.
    PLoS One. 2018;13:e0194612.
    PubMed     Text format     Abstract available

  60. KUSHITOR MK, Boatemaa S
    The double burden of disease and the challenge of health access: Evidence from Access, Bottlenecks, Cost and Equity facility survey in Ghana.
    PLoS One. 2018;13:e0194677.
    PubMed     Text format     Abstract available

  61. DEZIEL NC, Humeau Z, Elliott EG, Warren JL, et al
    Shale gas activity and increased rates of sexually transmitted infections in Ohio, 2000-2016.
    PLoS One. 2018;13:e0194203.
    PubMed     Text format     Abstract available

  62. DE VRIES SPW, Vurayai M, Holmes M, Gupta S, et al
    Phylogenetic analyses and antimicrobial resistance profiles of Campylobacter spp. from diarrhoeal patients and chickens in Botswana.
    PLoS One. 2018;13:e0194481.
    PubMed     Text format     Abstract available

  63. ALATRAKTCHI FA, Noori JS, Tanev GP, Mortensen J, et al
    Paper-based sensors for rapid detection of virulence factor produced by Pseudomonas aeruginosa.
    PLoS One. 2018;13:e0194157.
    PubMed     Text format     Abstract available

  64. PATRY C, Remme C, Betzen C, Tonshoff B, et al
    VCAM-1 expression is upregulated by CD34+/CD133+-stem cells derived from septic patients.
    PLoS One. 2018;13:e0195064.
    PubMed     Text format     Abstract available

  65. VISSERS M, Wijmenga-Monsuur AJ, Knol MJ, Badoux P, et al
    Increased carriage of non-vaccine serotypes with low invasive disease potential four years after switching to the 10-valent pneumococcal conjugate vaccine in The Netherlands.
    PLoS One. 2018;13:e0194823.
    PubMed     Text format     Abstract available

  66. SEPPANEN E, Tan D, Corscadden KJ, Currie AJ, et al
    Evidence of functional cell-mediated immune responses to nontypeable Haemophilus influenzae in otitis-prone children.
    PLoS One. 2018;13:e0193962.
    PubMed     Text format     Abstract available

  67. PUGLIESE M, Matic S, Prethi S, Gisi U, et al
    Molecular characterization and sensitivity to demethylation inhibitor fungicides of Aspergillus fumigatus from orange-based compost.
    PLoS One. 2018;13:e0200569.
    PubMed     Text format     Abstract available

  68. SORENSEN AIV, Rosendal T, Widgren S, Halasa T, et al
    Mechanistic modelling of interventions against spread of livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA) within a Danish farrow-to-finish pig herd.
    PLoS One. 2018;13:e0200563.
    PubMed     Text format     Abstract available

  69. AUGER JP, Dolbec D, Roy D, Segura M, et al
    Role of the Streptococcus suis serotype 2 capsular polysaccharide in the interactions with dendritic cells is strain-dependent but remains critical for virulence.
    PLoS One. 2018;13:e0200453.
    PubMed     Text format     Abstract available

  70. VELAYUTHAM B, Chadha VK, Singla N, Narang P, et al
    Recurrence of tuberculosis among newly diagnosed sputum positive pulmonary tuberculosis patients treated under the Revised National Tuberculosis Control Programme, India: A multi-centric prospective study.
    PLoS One. 2018;13:e0200150.
    PubMed     Text format     Abstract available

  71. WILLEMSE D, Weber B, Masino L, Warren RM, et al
    Rv1460, a SufR homologue, is a repressor of the suf operon in Mycobacterium tuberculosis.
    PLoS One. 2018;13:e0200145.
    PubMed     Text format     Abstract available

  72. HAIDER MSH, Khan WH, Deeba F, Ali S, et al
    BA9 lineage of respiratory syncytial virus from across the globe and its evolutionary dynamics.
    PLoS One. 2018;13:e0193525.
    PubMed     Text format     Abstract available

  73. VIDONDO B
    Amplification of the basic reproduction number in cattle farm networks.
    PLoS One. 2018;13:e0191257.
    PubMed     Text format     Abstract available


    PLoS Pathog

  74. HART T, Nguyen NTT, Nowak NA, Zhang F, et al
    Polymorphic factor H-binding activity of CspA protects Lyme borreliae from the host complement in feeding ticks to facilitate tick-to-host transmission.
    PLoS Pathog. 2018;14:e1007106.
    PubMed     Text format     Abstract available

  75. RITCHIE ND, Ritchie R, Bayes HK, Mitchell TJ, et al
    IL-17 can be protective or deleterious in murine pneumococcal pneumonia.
    PLoS Pathog. 2018;14:e1007099.
    PubMed     Text format     Abstract available

  76. WANG J, Sahoo M, Lantier L, Warawa J, et al
    Caspase-11-dependent pyroptosis of lung epithelial cells protects from melioidosis while caspase-1 mediates macrophage pyroptosis and production of IL-18.
    PLoS Pathog. 2018;14:e1007105.
    PubMed     Text format     Abstract available

  77. FITES JS, Gui M, Kernien JF, Negoro P, et al
    An unappreciated role for neutrophil-DC hybrids in immunity to invasive fungal infections.
    PLoS Pathog. 2018;14:e1007073.
    PubMed     Text format     Abstract available


    Science

  78. BAKER S, Thomson N, Weill FX, Holt KE, et al
    Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens.
    Science. 2018;360:733-738.
    PubMed     Text format     Abstract available

  79. FISHER MC, Hawkins NJ, Sanglard D, Gurr SJ, et al
    Worldwide emergence of resistance to antifungal drugs challenges human health and food security.
    Science. 2018;360:739-742.
    PubMed     Text format     Abstract available


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