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25.03.2019

1 Antimicrob Agents Chemother
1 BMJ
1 Clin Infect Dis
1 Curr Microbiol
2 Diagn Microbiol Infect Dis
4 Eur J Clin Microbiol Infect Dis
1 Infect Immun
3 J Antimicrob Chemother
1 J Bacteriol
2 J Infect Dis
13 J Med Microbiol
5 JAMA
3 Lancet
1 Lancet Child Adolesc Health
2 MMWR Morb Mortal Wkly Rep
3 N Engl J Med
1 PLoS Genet
1 PLoS Med
9 PLoS Negl Trop Dis
4 PLoS One
4 PLoS Pathog
5 Proc Natl Acad Sci U S A
1 Science


  Retrieve available abstracts of this week’s articles:
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Single Articles


    Antimicrob Agents Chemother

  1. SEYEDMOUSAVI S, Chang Y, Law D, Birch M, et al
    Efficacy of olorofim (F901318) against Aspergillus fumigatus, A. nidulans, and A. tanneri in murine models of profound neutropenia and chronic granulomatous disease.
    Antimicrob Agents Chemother. 2019 Mar 18. pii: AAC.00129.
    PubMed     Text format     Abstract available


    BMJ

  2. UEDA P, Svanstrom H, Melbye M, Eliasson B, et al
    Sodium glucose cotransporter 2 inhibitors and risk of serious adverse events: nationwide register based cohort study.
    BMJ. 2018;363:k4365.
    PubMed     Text format     Abstract available


    Clin Infect Dis

  3. TORNHEIM JA, Starks AM, Rodwell TC, Gardy JL, et al
    Building the framework for standardized clinical laboratory reporting of next generation sequencing data for resistance-associated mutations in Mycobacterium tuberculosis complex.
    Clin Infect Dis. 2019 Mar 18. pii: 5382557. doi: 10.1093.
    PubMed     Text format     Abstract available


    Curr Microbiol

  4. LUO Z, Chen M, Chen T, She P, et al
    Lactic Acid Produced by Glycolysis Contributed to Staphylococcus aureus Aggregation Induced by Glucose.
    Curr Microbiol. 2019 Mar 20. pii: 10.1007/s00284-019-01666.
    PubMed     Text format     Abstract available


    Diagn Microbiol Infect Dis

  5. ASHOKAN A, Papanicolas LE, Leong LEX, Theodossi M, et al
    Case report: Identification of intra-laboratory blood culture contamination with Staphylococcus aureus by whole genome sequencing.
    Diagn Microbiol Infect Dis. 2019 Feb 23. pii: S0732-8893(19)30069.
    PubMed     Text format     Abstract available

  6. FERREIRA RBR, Ferreira MCS, Glatthardt T, Silverio MP, et al
    Osmotic stress induces biofilm production by Staphylococcus epidermidis isolates from neonates.
    Diagn Microbiol Infect Dis. 2019 Feb 20. pii: S0732-8893(18)30577.
    PubMed     Text format     Abstract available


    Eur J Clin Microbiol Infect Dis

  7. LI J, Hu W, Zhang F, Li M, et al
    Evaluation of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for identifying Burkholderia pseudomallei and Burkholderia thailandensis isolates.
    Eur J Clin Microbiol Infect Dis. 2019;38:191-196.
    PubMed     Text format     Abstract available

  8. PERILLAUD-DUBOIS C, Pilmis B, Diep J, de Ponfilly GP, et al
    Performance of rapid antimicrobial susceptibility testing by disk diffusion on MHR-SIR agar directly on urine specimens.
    Eur J Clin Microbiol Infect Dis. 2019;38:185-189.
    PubMed     Text format     Abstract available

  9. SABBAGH P, Mohammadnia-Afrouzi M, Javanian M, Babazadeh A, et al
    Diagnostic methods for Helicobacter pylori infection: ideals, options, and limitations.
    Eur J Clin Microbiol Infect Dis. 2019;38:55-66.
    PubMed     Text format     Abstract available

  10. ABDELBARY MHH, Senn L, Greub G, Chaillou G, et al
    Whole-genome sequencing revealed independent emergence of vancomycin-resistant Enterococcus faecium causing sequential outbreaks over 3 years in a tertiary care hospital.
    Eur J Clin Microbiol Infect Dis. 2019 Mar 19. pii: 10.1007/s10096-019-03524.
    PubMed     Text format     Abstract available


    Infect Immun

  11. AUSTIN CM, Garabaglu S, Krute CN, Ridder MJ, et al
    Contribution of YjbIH to virulence factor expression and host colonization in Staphylococcus aureus.
    Infect Immun. 2019 Mar 18. pii: IAI.00155-19. doi: 10.1128/IAI.00155.
    PubMed     Text format     Abstract available


    J Antimicrob Chemother

  12. SASSI M, Guerin F, Zouari A, Beyrouthy R, et al
    Emergence of optrA-mediated linezolid resistance in enterococci from France, 2006-16.
    J Antimicrob Chemother. 2019 Mar 20. pii: 5416192. doi: 10.1093.
    PubMed     Text format     Abstract available

  13. RIVERO-MENENDEZ O, Cuenca-Estrella M, Alastruey-Izquierdo A
    In vitro activity of olorofim (F901318) against clinical isolates of cryptic species of Aspergillus by EUCAST and CLSI methodologies.
    J Antimicrob Chemother. 2019 Mar 19. pii: 5396709. doi: 10.1093.
    PubMed     Text format     Abstract available

  14. HAO W, Shan X, Li D, Schwarz S, et al
    Analysis of a poxtA- and optrA-co-carrying conjugative multiresistance plasmid from Enterococcus faecalis.
    J Antimicrob Chemother. 2019 Mar 19. pii: 5396705. doi: 10.1093.
    PubMed     Text format     Abstract available


    J Bacteriol

  15. SCOTT JE, O'Toole GA
    The Yin and Yang of Streptococcus Lung Infections in Cystic Fibrosis: A Model for Studying Polymicrobial Interactions.
    J Bacteriol. 2019 Mar 18. pii: JB.00115-19. doi: 10.1128/JB.00115.
    PubMed     Text format     Abstract available


    J Infect Dis

  16. DEY RJ, Dey B, Singh AK, Praharaj M, et al
    BCG overexpressing an endogenous STING agonist provides enhanced protection against pulmonary tuberculosis.
    J Infect Dis. 2019 Mar 15. pii: 5381716. doi: 10.1093.
    PubMed     Text format     Abstract available

  17. TONBY K, Mortensen R, Ruhwald M, Dyrhol-Riise AM, et al
    KLRG1-Expressing CD4 T Cells Are Reduced in Tuberculosis Patients Compared to Healthy Mycobacterium tuberculosis-Infected Subjects, but Increase With Treatment.
    J Infect Dis. 2019 Mar 19. pii: 5387565. doi: 10.1093.
    PubMed     Text format    


    J Med Microbiol

  18. LYU J, Zhang J, Ren X
    Detection and identification of bacterial pathogens directly from sputum samples by pyrosequencing.
    J Med Microbiol. 2019;68:368-373.
    PubMed     Text format     Abstract available

  19. KONTOPOULOU K, Iosifidis E, Antoniadou E, Tasioudis P, et al
    The clinical significance of carbapenem-resistant Klebsiella pneumoniae rectal colonization in critically ill patients: from colonization to bloodstream infection.
    J Med Microbiol. 2019 Jan 28. doi: 10.1099/jmm.0.000921.
    PubMed     Text format     Abstract available

  20. MCCURTAIN JL, Gilbertsen AJ, Evert C, Williams BJ, et al
    Agmatine accumulation by Pseudomonas aeruginosa clinical isolates confers antibiotic tolerance and dampens host inflammation.
    J Med Microbiol. 2019;68:446-455.
    PubMed     Text format     Abstract available

  21. UMEDA K, Hase A, Matsuo M, Horimoto T, et al
    Prevalence and genetic characterization of cephalosporin-resistant Enterobacteriaceae among dogs and cats in an animal shelter.
    J Med Microbiol. 2019 Jan 30. doi: 10.1099/jmm.0.000933.
    PubMed     Text format     Abstract available

  22. OCTAVIA S, Zulaina S, Seet SK, Tien WS, et al
    Whole-genome sequencing of the rare Salmonella enterica serovar Anfo isolated from food handlers.
    J Med Microbiol. 2019;68:429-431.
    PubMed     Text format     Abstract available

  23. ABDELAZIZ H, von Forster G, Kuhn KD, Gehrke T, et al
    Minimum 5 years' follow-up after gentamicin- and clindamycin-loaded PMMA cement in total joint arthroplasty.
    J Med Microbiol. 2019;68:475-479.
    PubMed     Text format     Abstract available

  24. GOLEBIEWSKA JE, Krawczyk B, Wysocka M, Ewiak A, et al
    Host and pathogen factors in Klebsiella pneumoniae upper urinary tract infections in renal transplant patients.
    J Med Microbiol. 2019 Feb 12. doi: 10.1099/jmm.0.000942.
    PubMed     Text format     Abstract available

  25. HUANG Y, Xue C, He W, Zhao X, et al
    Inhibition effect of Zedoary turmeric oil on Listeria monocytogenes and Staphylococcus aureus growth and exotoxin proteins production.
    J Med Microbiol. 2019 Mar 18. doi: 10.1099/jmm.0.000949.
    PubMed     Text format     Abstract available

  26. ZHENG JX, Sun X, Lin ZW, Qi GB, et al
    In vitro activities of daptomycin combined with fosfomycin or rifampin on planktonic and adherent linezolid-resistant isolates of Enterococcus faecalis.
    J Med Microbiol. 2019;68:493-502.
    PubMed     Text format     Abstract available

  27. GETTI GTM, Poole PL
    Allicin causes fragmentation of the peptidoglycan coat in Staphylococcus aureus by effecting synthesis and aiding hydrolysis: a determination by MALDI-TOF mass spectrometry on whole cells.
    J Med Microbiol. 2019 Mar 19. doi: 10.1099/jmm.0.000950.
    PubMed     Text format     Abstract available

  28. HUNTER E, Greig DR, Schaefer U, Wright MJ, et al
    Identification and typing of Yersinia enterocolitica and Yersinia pseudotuberculosis isolated from human clinical specimens in England between 2004 and 2018.
    J Med Microbiol. 2019 Mar 19. doi: 10.1099/jmm.0.000943.
    PubMed     Text format     Abstract available

  29. DE CARVALHO SP, de Almeida JB, de Freitas LM, Guimaraes AMS, et al
    Genomic profile of Brazilian methicillin-resistant Staphylococcus aureus resembles clones dispersed worldwide.
    J Med Microbiol. 2019 Mar 22. doi: 10.1099/jmm.0.000956.
    PubMed     Text format     Abstract available

  30. RABAAN AA, Al-Ahmed SH, Alsuliman SA, Aldrazi FA, et al
    The rise of pneumonic plague in Madagascar: current plague outbreak breaks usual seasonal mould.
    J Med Microbiol. 2019;68:292-302.
    PubMed     Text format     Abstract available


    JAMA

  31. GUIRGUIS-BLAKE JM, Evans CV, Rushkin M
    Ocular Prophylaxis for Gonococcal Ophthalmia Neonatorum: Updated Evidence Report and Systematic Review for the US Preventive Services Task Force.
    JAMA. 2019;321:404-406.
    PubMed     Text format    

  32. GRENNAN D
    IDWeek Fosters Innovation in Infectious Disease Care.
    JAMA. 2019;321:137.
    PubMed     Text format    

  33. JIN J
    Prevention of Gonococcal Eye Infection in Newborns.
    JAMA. 2019;321:414.
    PubMed     Text format    

  34. CURRY SJ, Krist AH, Owens DK, Barry MJ, et al
    Ocular Prophylaxis for Gonococcal Ophthalmia Neonatorum: US Preventive Services Task Force Reaffirmation Recommendation Statement.
    JAMA. 2019;321:394-398.
    PubMed     Text format     Abstract available

  35. GRENNAN D
    Leptospirosis.
    JAMA. 2019;321:812.
    PubMed     Text format    


    Lancet

  36. OLMEDO-RENEAUM A, Garcia-Juarez I, Toapanta-Yanchapaxi L, De La Pena-Lopez R, et al
    Rogue "stem cell clinic" leads to Mycobacterium abscessus infection.
    Lancet. 2019;393:918.
    PubMed     Text format    

  37. DOYLE LW, Cheong JLY
    Does bovine lactoferrin prevent late-onset neonatal sepsis?
    Lancet. 2019 Jan 8. pii: S0140-6736(18)32390.
    PubMed     Text format    

  38. MBONYE AK, Sekamatte M
    Disease outbreaks and reporting in Uganda.
    Lancet. 2018;392:2347-2348.
    PubMed     Text format    


    Lancet Child Adolesc Health

  39. MARTINEZ L
    Towards a more holistic understanding of paediatric tuberculosis.
    Lancet Child Adolesc Health. 2019;3:220-221.
    PubMed     Text format    


    MMWR Morb Mortal Wkly Rep


  40. World TB Day - March 24, 2019.
    MMWR Morb Mortal Wkly Rep. 2019;68:257.
    PubMed     Text format     Abstract available

  41. MACNEIL A, Glaziou P, Sismanidis C, Maloney S, et al
    Global Epidemiology of Tuberculosis and Progress Toward Achieving Global Targets - 2017.
    MMWR Morb Mortal Wkly Rep. 2019;68:263-266.
    PubMed     Text format     Abstract available


    N Engl J Med

  42. PAAVONEN J, Brunham RC
    Bacterial Vaginosis and Desquamative Inflammatory Vaginitis. Reply.
    N Engl J Med. 2019;380:1089.
    PubMed     Text format    

  43. GIOVANINI AF, Lobas A, Reisdoerfer G
    Bacterial Vaginosis and Desquamative Inflammatory Vaginitis.
    N Engl J Med. 2019;380:1088-1089.
    PubMed     Text format    

  44. MAGILL SS, O'Leary E, Edwards JR
    Changes in Prevalence of Health Care-Associated Infections. Reply.
    N Engl J Med. 2019;380:1085-1086.
    PubMed     Text format    


    PLoS Genet

  45. ELRAMLI N, Karahoda B, Sarikaya-Bayram O, Frawley D, et al
    Assembly of a heptameric STRIPAK complex is required for coordination of light-dependent multicellular fungal development with secondary metabolism in Aspergillus nidulans.
    PLoS Genet. 2019;15:e1008053.
    PubMed     Text format     Abstract available


    PLoS Med

  46. PHILLIPS PPJ, Mitnick CD, Neaton JD, Nahid P, et al
    Keeping phase III tuberculosis trials relevant: Adapting to a rapidly changing landscape.
    PLoS Med. 2019;16:e1002767.
    PubMed     Text format     Abstract available


    PLoS Negl Trop Dis

  47. SMITH S, Kennedy BJ, Dermedgoglou A, Poulgrain SS, et al
    A simple score to predict severe leptospirosis.
    PLoS Negl Trop Dis. 2019;13:e0007205.
    PubMed     Text format     Abstract available

  48. SARASWATI K, Phanichkrivalkosil M, Day NPJ, Blacksell SD, et al
    The validity of diagnostic cut-offs for commercial and in-house scrub typhus IgM and IgG ELISAs: A review of the evidence.
    PLoS Negl Trop Dis. 2019;13:e0007158.
    PubMed     Text format     Abstract available

  49. LIMA AAM, Oliveira DB, Quetz JS, Havt A, et al
    Etiology and severity of diarrheal diseases in infants at the semiarid region of Brazil: A case-control study.
    PLoS Negl Trop Dis. 2019;13:e0007154.
    PubMed     Text format     Abstract available

  50. ESMAEILI S, Mohabati Mobarez A, Khalili M, Mostafavi E, et al
    Genetic evidence of Coxiella burnetii infection in acute febrile illnesses in Iran.
    PLoS Negl Trop Dis. 2019;13:e0007181.
    PubMed     Text format     Abstract available

  51. BALDWIN SL, Larsen SE, Ordway D, Cassell G, et al
    The complexities and challenges of preventing and treating nontuberculous mycobacterial diseases.
    PLoS Negl Trop Dis. 2019;13:e0007083.
    PubMed     Text format     Abstract available

  52. O'BRIEN DP, Murrie A, Meggyesy P, Priestley J, et al
    Spontaneous healing of Mycobacterium ulcerans disease in Australian patients.
    PLoS Negl Trop Dis. 2019;13:e0007178.
    PubMed     Text format     Abstract available

  53. MARINHO DE SOUZA J, Giuffrida R, Ramos APM, Morceli G, et al
    Mother-to-child transmission and gestational syphilis: Spatial-temporal epidemiology and demographics in a Brazilian region.
    PLoS Negl Trop Dis. 2019;13:e0007122.
    PubMed     Text format     Abstract available

  54. ZHANG M, Li F, Li R, Gong J, et al
    Fast diagnosis of sporotrichosis caused by Sporothrix globosa, Sporothrix schenckii, and Sporothrix brasiliensis based on multiplex real-time PCR.
    PLoS Negl Trop Dis. 2019;13:e0007219.
    PubMed     Text format     Abstract available

  55. KATHAMUTHU GR, Munisankar S, Sridhar R, Baskaran D, et al
    Helminth mediated modulation of the systemic and mycobacterial antigen - stimulated cytokine profiles in extra-pulmonary tuberculosis.
    PLoS Negl Trop Dis. 2019;13:e0007265.
    PubMed     Text format     Abstract available


    PLoS One

  56. SUMI A, Kobayashi N
    Time-series analysis of geographically specific monthly number of newly registered cases of active tuberculosis in Japan.
    PLoS One. 2019;14:e0213856.
    PubMed     Text format     Abstract available

  57. PICARRA S, Lopes E, Almeida PL, de Lencastre H, et al
    Novel coating containing molybdenum oxide nanoparticles to reduce Staphylococcus aureus contamination on inanimate surfaces.
    PLoS One. 2019;14:e0213151.
    PubMed     Text format     Abstract available

  58. BERARDI A, Spada C, Reggiani MLB, Creti R, et al
    Group B Streptococcus early-onset disease and observation of well-appearing newborns.
    PLoS One. 2019;14:e0212784.
    PubMed     Text format     Abstract available

  59. DOLCE D, Neri S, Grisotto L, Campana S, et al
    Methicillin-resistant Staphylococcus aureus eradication in cystic fibrosis patients: A randomized multicenter study.
    PLoS One. 2019;14:e0213497.
    PubMed     Text format     Abstract available


    PLoS Pathog

  60. GURUNG S, Reuter N, Preno A, Dubaut J, et al
    Zika virus infection at mid-gestation results in fetal cerebral cortical injury and fetal death in the olive baboon.
    PLoS Pathog. 2019;15:e1007507.
    PubMed     Text format     Abstract available

  61. SZAPPANOS D, Tschismarov R, Perlot T, Westermayer S, et al
    The RNA helicase DDX3X is an essential mediator of innate antimicrobial immunity.
    PLoS Pathog. 2018;14:e1007397.
    PubMed     Text format     Abstract available

  62. MARTINEZ ME
    The calendar of epidemics: Seasonal cycles of infectious diseases.
    PLoS Pathog. 2018;14:e1007327.
    PubMed     Text format    

  63. YU YY, Kong W, Yin YX, Dong F, et al
    Mucosal immunoglobulins protect the olfactory organ of teleost fish against parasitic infection.
    PLoS Pathog. 2018;14:e1007251.
    PubMed     Text format     Abstract available


    Proc Natl Acad Sci U S A

  64. KHATRI A, Kraft BD, Tata PR, Randell SH, et al
    ABL kinase inhibition promotes lung regeneration through expansion of an SCGB1A1+ SPC+ cell population following bacterial pneumonia.
    Proc Natl Acad Sci U S A. 2019;116:1603-1612.
    PubMed     Text format     Abstract available

  65. DOMENECH DE CELLES M, Arduin H, Levy-Bruhl D, Georges S, et al
    Unraveling the seasonal epidemiology of pneumococcus.
    Proc Natl Acad Sci U S A. 2019;116:1802-1807.
    PubMed     Text format     Abstract available

  66. BIGI R, Landis JT, An H, Caro-Vegas C, et al
    Epstein-Barr virus enhances genome maintenance of Kaposi sarcoma-associated herpesvirus.
    Proc Natl Acad Sci U S A. 2018;115:E11379-E11387.
    PubMed     Text format     Abstract available

  67. LANGELIER C, Kalantar KL, Moazed F, Wilson MR, et al
    Integrating host response and unbiased microbe detection for lower respiratory tract infection diagnosis in critically ill adults.
    Proc Natl Acad Sci U S A. 2018;115:E12353-E12362.
    PubMed     Text format     Abstract available

  68. SILVA-VALENZUELA CA, Camilli A
    Niche adaptation limits bacteriophage predation of Vibrio cholerae in a nutrient-poor aquatic environment.
    Proc Natl Acad Sci U S A. 2019;116:1627-1632.
    PubMed     Text format     Abstract available


    Science

  69. HICKMAN HD
    Slowing blood flow to fight viral infection.
    Science. 2019;363:585-586.
    PubMed     Text format    


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