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03.12.2018

3 Antimicrob Agents Chemother
1 BMC Neurol
1 BMC Pediatr
16 Clin Infect Dis
1 Curr Microbiol
1 Diagn Microbiol Infect Dis
8 Eur J Clin Microbiol Infect Dis
2 Infect Immun
1 J Bacteriol
2 J Infect Dis
2 JAMA
1 Lancet
3 Lancet Infect Dis
1 PLoS Comput Biol
7 PLoS Negl Trop Dis
25 PLoS One


  Retrieve available abstracts of this week’s articles:
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Single Articles


    Antimicrob Agents Chemother

  1. BARBER AE, Weber M, Kaerger K, Linde J, et al
    Comparative genomics of serial Candida glabrata isolates and the rapid acquisition of echinocandin resistance during therapy.
    Antimicrob Agents Chemother. 2018 Nov 26. pii: AAC.01628.
    PubMed     Text format     Abstract available

  2. STOTT KE, Beardsley J, Kolamunnage-Dona R, Castelazo AS, et al
    Correction for Stott et al., "Population Pharmacokinetics and Cerebrospinal Fluid Penetration of Fluconazole in Adults with Cryptococcal Meningitis".
    Antimicrob Agents Chemother. 2018;62.
    PubMed     Text format    

  3. STOTT KE, Beardsley J, Whalley S, Mukasa Kibengo F, et al
    Correction for Stott et al., "Population Pharmacokinetic Model and Meta-analysis of Outcomes of Amphotericin B Deoxycholate Use in Adults with Cryptococcal Meningitis".
    Antimicrob Agents Chemother. 2018;62.
    PubMed     Text format    


    BMC Neurol

  4. ARAI N, Mine Y, Kagami H, Inaba M, et al
    Rush progression and fatal result of septic shock related to central line catheter infection in cirrhosis patient with brain stroke.
    BMC Neurol. 2018;18:158.
    PubMed     Text format     Abstract available


    BMC Pediatr

  5. RAVISANKAR S, Tatum R, Garg PM, Herco M, et al
    Necrotizing enterocolitis leads to disruption of tight junctions and increase in gut permeability in a mouse model.
    BMC Pediatr. 2018;18:372.
    PubMed     Text format     Abstract available


    Clin Infect Dis

  6. DESHPANDE D, Pasipanodya JG, Srivastava S, Bendet P, et al
    Gatifloxacin Pharmacokinetics/Pharmacodynamics-based Optimal Dosing for Pulmonary and Meningeal Multidrug-resistant Tuberculosis.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  7. PASIPANODYA JG, Smythe W, Merle CS, Olliaro PL, et al
    Artificial intelligence-derived 3-Way Concentration-dependent Antagonism of Gatifloxacin, Pyrazinamide, and Rifampicin During Treatment of Pulmonary Tuberculosis.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  8. DESHPANDE D, Srivastava S, Nuermberger E, Koeuth T, et al
    Multiparameter Responses to Tedizolid Monotherapy and Moxifloxacin Combination Therapy Models of Children With Intracellular Tuberculosis.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  9. GUMBO T, Alffenaar JC
    Pharmacokinetic/Pharmacodynamic Background and Methods and Scientific Evidence Base for Dosing of Second-line Tuberculosis Drugs.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  10. CUBILLOS-ANGULO JM, Arriaga MB, Silva EC, Muller BLA, et al
    Polymorphisms in TLR4 and TNFA and Risk of Mycobacterium tuberculosis Infection and Development of Active Disease in Contacts of Tuberculosis Cases in Brazil: A Prospective Cohort Study.
    Clin Infect Dis. 2018 Nov 24. pii: 5204461. doi: 10.1093/cid/ciy1001.
    PubMed     Text format     Abstract available

  11. DESHPANDE D, Pasipanodya JG, Mpagama SG, Srivastava S, et al
    Ethionamide Pharmacokinetics/Pharmacodynamics-derived Dose, the Role of MICs in Clinical Outcome, and the Resistance Arrow of Time in Multidrug-resistant Tuberculosis.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  12. GANMAA D, Khudyakov P, Buyanjargal U, Jargalsaikhan B, et al
    Prevalence and determinants of QuantiFERON-diagnosed tuberculosis infection in 9,810 Mongolian schoolchildren.
    Clin Infect Dis. 2018 Nov 27. pii: 5210883. doi: 10.1093.
    PubMed     Text format     Abstract available

  13. STOKES W, Parkins MD, Parfitt ECT, Ruiz JC, et al
    Incidence and Outcomes of Staphylococcus aureus Bacteriuria: A Population-based Study.
    Clin Infect Dis. 2018 Nov 24. pii: 5204458. doi: 10.1093/cid/ciy1000.
    PubMed     Text format     Abstract available

  14. DESHPANDE D, Alffenaar JC, Koser CU, Dheda K, et al
    d-Cycloserine Pharmacokinetics/Pharmacodynamics, Susceptibility, and Dosing Implications in Multidrug-resistant Tuberculosis: A Faustian Deal.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  15. DESHPANDE D, Pasipanodya JG, Mpagama SG, Bendet P, et al
    Levofloxacin Pharmacokinetics/Pharmacodynamics, Dosing, Susceptibility Breakpoints, and Artificial Intelligence in the Treatment of Multidrug-resistant Tuberculosis.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  16. FALZON D, Jaramillo E, Gilpin C, Weyer K, et al
    The Role of Novel Approaches and New Findings in the Pharmacology of Tuberculosis Medicines in Improving Treatment Outcomes.
    Clin Infect Dis. 2018;67.
    PubMed     Text format    

  17. BOLHUIS MS, Akkerman OW, Sturkenboom MGG, Ghimire S, et al
    Linezolid-based Regimens for Multidrug-resistant Tuberculosis (TB): A Systematic Review to Establish or Revise the Current Recommended Dose for TB Treatment.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  18. STURKENBOOM MGG, Simbar N, Akkerman OW, Ghimire S, et al
    Amikacin Dosing for MDR Tuberculosis: A Systematic Review to Establish or Revise the Current Recommended Dose for Tuberculosis Treatment.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  19. SRIVASTAVA S, Deshpande D, Magombedze G, Gumbo T, et al
    Efficacy Versus Hepatotoxicity of High-dose Rifampin, Pyrazinamide, and Moxifloxacin to Shorten Tuberculosis Therapy Duration: There Is Still Fight in the Old Warriors Yet!
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  20. MAGOMBEDZE G, Pasipanodya JG, Srivastava S, Deshpande D, et al
    Transformation Morphisms and Time-to-Extinction Analysis That Map Therapy Duration From Preclinical Models to Patients With Tuberculosis: Translating From Apples to Oranges.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available

  21. SRIVASTAVA S, Deshpande D, Nuermberger E, Lee PS, et al
    The Sterilizing Effect of Intermittent Tedizolid for Pulmonary Tuberculosis.
    Clin Infect Dis. 2018;67.
    PubMed     Text format     Abstract available


    Curr Microbiol

  22. HE P, Wang H, Luo J, Yan Y, et al
    A Real-Time PCR with Melting Curve Analysis for Molecular Typing of Vibrio parahaemolyticus.
    Curr Microbiol. 2018;75:1206-1213.
    PubMed     Text format     Abstract available


    Diagn Microbiol Infect Dis

  23. DUNCAN LR, Flamm RK, Sader HS, Mendes RE, et al
    In vitro activity of telavancin against Staphylococcus aureus causing pneumonia or skin and skin structure infections with concomitant bloodstream infections in United States hospitals (2012-2016).
    Diagn Microbiol Infect Dis. 2018 Oct 2. pii: S0732-8893(18)30420.
    PubMed     Text format     Abstract available


    Eur J Clin Microbiol Infect Dis

  24. PREDRAG S, Branislava K, Nikola S, Niko R, et al
    Community-acquired Clostridium difficile infection in Serbian pediatric population.
    Eur J Clin Microbiol Infect Dis. 2018;37:1061-1069.
    PubMed     Text format     Abstract available

  25. KALALAHTI I, Huotari K, Lahdensuo K, Tarkka E, et al
    Rectal E. coli above ciprofloxacin ECOFF associate with infectious complications following prostate biopsy.
    Eur J Clin Microbiol Infect Dis. 2018;37:1055-1060.
    PubMed     Text format     Abstract available

  26. BERTRAND K, Lamy B, De Boutray M, Yachouh J, et al
    Osteomyelitis of the jaw: time to rethink the bone sampling strategy?
    Eur J Clin Microbiol Infect Dis. 2018;37:1071-1080.
    PubMed     Text format     Abstract available

  27. LIMA WG, Alves MC, Cruz WS, Paiva MC, et al
    Chromosomally encoded and plasmid-mediated polymyxins resistance in Acinetobacter baumannii: a huge public health threat.
    Eur J Clin Microbiol Infect Dis. 2018;37:1009-1019.
    PubMed     Text format     Abstract available

  28. HUANG DB, Park JH, Murphy TM
    Iclaprim activity against wild-type and corresponding thymidine kinase-deficient Staphylococcus aureus in a mouse protection model.
    Eur J Clin Microbiol Infect Dis. 2018 Nov 27. pii: 10.1007/s10096-018-3440.
    PubMed     Text format     Abstract available

  29. JAYOL A, Corlouer C, Haenni M, Darty M, et al
    Are animals a source of Stenotrophomonas maltophilia in human infections? Contributions of a nationwide molecular study.
    Eur J Clin Microbiol Infect Dis. 2018;37:1039-1045.
    PubMed     Text format     Abstract available

  30. CUNHA BA, Dieguez B, Varantsova A
    Lessons learned from splenic infarcts with fever of unknown origin (FUO): culture-negative endocarditis (CNE) or malignancy?
    Eur J Clin Microbiol Infect Dis. 2018;37:995-999.
    PubMed     Text format     Abstract available

  31. RYAN L, Daly P, Cullen I, Doyle M, et al
    Epididymo-orchitis caused by enteric organisms in men > 35 years old: beyond fluoroquinolones.
    Eur J Clin Microbiol Infect Dis. 2018;37:1001-1008.
    PubMed     Text format     Abstract available


    Infect Immun

  32. PITTS MG, Combs TA, D'Orazio SEF
    Neutrophils from Both Susceptible and Resistant Mice Efficiently Kill Opsonized Listeria monocytogenes.
    Infect Immun. 2018;86.
    PubMed     Text format     Abstract available

  33. COOK LCC, Hu H, Maienschein-Cline M, Federle MJ, et al
    A Vaginal Tract Signal Detected by the Group B Streptococcus SaeRS System Elicits Transcriptomic Changes and Enhances Murine Colonization.
    Infect Immun. 2018;86.
    PubMed     Text format     Abstract available


    J Bacteriol

  34. CHIANG-NI C, Kao CY, Hsu CY, Chiu CH, et al
    Phosphorylation at the D53 but not T65 residue of CovR determines the repression of rgg and speB transcription in emm1- and emm49-type group A streptococci.
    J Bacteriol. 2018 Nov 26. pii: JB.00681-18. doi: 10.1128/JB.00681.
    PubMed     Text format     Abstract available


    J Infect Dis

  35. BENNETT MR, Bombardi RG, Kose N, Parrish EH, et al
    Human mAbs to Staphylococcus aureus IsdA Provide Protection Through Both Heme-Blocking and Fc-Mediated Mechanisms.
    J Infect Dis. 2018 Nov 29. pii: 5218956. doi: 10.1093.
    PubMed     Text format     Abstract available

  36. SINHA P, Davis J, Saag L, Wanke C, et al
    Undernutrition and Tuberculosis: Public Health Implications.
    J Infect Dis. 2018 Nov 22. pii: 5197537. doi: 10.1093.
    PubMed     Text format     Abstract available


    JAMA

  37. LEWIS JM, Henrion M, Rylance J
    Validity of the qSOFA Score in Low- and Middle-Income Countries.
    JAMA. 2018;320:2038-2039.
    PubMed     Text format    

  38. SLOMSKI A
    Vaccine Prevents Active Tuberculosis.
    JAMA. 2018;320:2068.
    PubMed     Text format    


    Lancet


  39. Global, regional, and national disability-adjusted life-years (DALYs) for 359 diseases and injuries and healthy life expectancy (HALE) for 195 countries and territories, 1990-2017: a systematic analysis for the Global Burden of Disease Study 2017.
    Lancet. 2018;392:1859-1922.
    PubMed     Text format     Abstract available


    Lancet Infect Dis

  40. SCHRAG SJ
    Group B streptococcal disease: unmet needs in high-income countries.
    Lancet Infect Dis. 2018 Nov 26. pii: S1473-3099(18)30604.
    PubMed     Text format    

  41. O'SULLIVAN CP, Lamagni T, Patel D, Efstratiou A, et al
    Group B streptococcal disease in UK and Irish infants younger than 90 days, 2014-15: a prospective surveillance study.
    Lancet Infect Dis. 2018 Nov 26. pii: S1473-3099(18)30555.
    PubMed     Text format     Abstract available

  42. LEE JK, Lee JY, Kim DK, Yoon HI, et al
    Substitution of ethambutol with linezolid during the intensive phase of treatment of pulmonary tuberculosis: a prospective, multicentre, randomised, open-label, phase 2 trial.
    Lancet Infect Dis. 2018 Nov 23. pii: S1473-3099(18)30480.
    PubMed     Text format     Abstract available


    PLoS Comput Biol

  43. BROOKS LC, Farrow DC, Hyun S, Tibshirani RJ, et al
    Nonmechanistic forecasts of seasonal influenza with iterative one-week-ahead distributions.
    PLoS Comput Biol. 2018;14:e1006134.
    PubMed     Text format     Abstract available


    PLoS Negl Trop Dis

  44. GUILLEBAUD J, Bernardson B, Randriambolamanantsoa TH, Randrianasolo L, et al
    Study on causes of fever in primary healthcare center uncovers pathogens of public health concern in Madagascar.
    PLoS Negl Trop Dis. 2018;12:e0006642.
    PubMed     Text format     Abstract available

  45. RAPOSO MT, Reis MC, Caminha AVQ, Heukelbach J, et al
    Grade 2 disabilities in leprosy patients from Brazil: Need for follow-up after completion of multidrug therapy.
    PLoS Negl Trop Dis. 2018;12:e0006645.
    PubMed     Text format     Abstract available

  46. MESHESHA TD, Senbete GH, Bogale GG
    Determinants for not utilizing trachomatous trichiasis surgery among trachomatous trichiasis patients in Mehalsayint District, North-East Ethiopia.
    PLoS Negl Trop Dis. 2018;12:e0006669.
    PubMed     Text format     Abstract available

  47. AUNG PTZ, Cuningham W, Hwang K, Andrews RM, et al
    Scabies and risk of skin sores in remote Australian Aboriginal communities: A self-controlled case series study.
    PLoS Negl Trop Dis. 2018;12:e0006668.
    PubMed     Text format     Abstract available

  48. COELHO RA, Brito-Santos F, Figueiredo-Carvalho MHG, Silva JVDS, et al
    Molecular identification and antifungal susceptibility profiles of clinical strains of Fonsecaea spp. isolated from patients with chromoblastomycosis in Rio de Janeiro, Brazil.
    PLoS Negl Trop Dis. 2018;12:e0006675.
    PubMed     Text format     Abstract available

  49. GEORGE CM, Hasan K, Monira S, Rahman Z, et al
    A prospective cohort study comparing household contact and water Vibrio cholerae isolates in households of cholera patients in rural Bangladesh.
    PLoS Negl Trop Dis. 2018;12:e0006641.
    PubMed     Text format     Abstract available

  50. PEARSON G
    Understanding perceptions on 'Buruli' in northwestern Uganda: A biosocial investigation.
    PLoS Negl Trop Dis. 2018;12:e0006689.
    PubMed     Text format     Abstract available


    PLoS One

  51. CLOETE R, Kapp E, Joubert J, Christoffels A, et al
    Molecular modelling and simulation studies of the Mycobacterium tuberculosis multidrug efflux pump protein Rv1258c.
    PLoS One. 2018;13:e0207605.
    PubMed     Text format     Abstract available

  52. GASHU Z, Jerene D, Datiko DG, Hiruy N, et al
    Seasonal patterns of tuberculosis case notification in the tropics of Africa: A six-year trend analysis in Ethiopia.
    PLoS One. 2018;13:e0207552.
    PubMed     Text format     Abstract available

  53. MICHELET L, de Cruz K, Karoui C, Tambosco J, et al
    Second line molecular diagnosis for bovine tuberculosis to improve diagnostic schemes.
    PLoS One. 2018;13:e0207614.
    PubMed     Text format     Abstract available

  54. JAJOO M, Manchanda V, Chaurasia S, Sankar MJ, et al
    Alarming rates of antimicrobial resistance and fungal sepsis in outborn neonates in North India.
    PLoS One. 2018;13:e0180705.
    PubMed     Text format     Abstract available

  55. BARRETT B, Hayney MS, Muller D, Rakel D, et al
    Meditation or exercise for preventing acute respiratory infection (MEPARI-2): A randomized controlled trial.
    PLoS One. 2018;13:e0197778.
    PubMed     Text format     Abstract available

  56. KERS JA, DeFusco AW, Park JH, Xu J, et al
    OG716: Designing a fit-for-purpose lantibiotic for the treatment of Clostridium difficile infections.
    PLoS One. 2018;13:e0197467.
    PubMed     Text format     Abstract available

  57. SALMANROGHANI H, Mirvakili M, Baghbanian M, Salmanroghani R, et al
    Efficacy and Tolerability of Two Quadruple Regimens: Bismuth, Omeprazole, Metronidazole with Amoxicillin or Tetracycline as First-Line Treatment for Eradication of Helicobacter Pylori in Patients with Duodenal Ulcer: A Randomized Clinical Trial.
    PLoS One. 2018;13:e0197096.
    PubMed     Text format     Abstract available

  58. COSTA MB, Hungria EM, Freitas AA, Sousa ALOM, et al
    In situ T regulatory cells and Th17 cytokines in paired samples of leprosy type 1 and type 2 reactions.
    PLoS One. 2018;13:e0196853.
    PubMed     Text format     Abstract available

  59. OCHOA-HEIN E, Sifuentes-Osornio J, Ponce de Leon-Garduno A, Torres-Gonzalez P, et al
    Factors associated with an outbreak of hospital-onset, healthcare facility-associated Clostridium difficile infection (HO-HCFA CDI) in a Mexican tertiary care hospital: A case-control study.
    PLoS One. 2018;13:e0198212.
    PubMed     Text format     Abstract available

  60. TEASDALE CA, Abrams EJ, Chiasson MA, Justman J, et al
    Incidence of sexually transmitted infections during pregnancy.
    PLoS One. 2018;13:e0197696.
    PubMed     Text format     Abstract available

  61. SHESHADRI A, Shah DP, Godoy M, Erasmus JJ, et al
    Progression of the Radiologic Severity Index predicts mortality in patients with parainfluenza virus-associated lower respiratory infections.
    PLoS One. 2018;13:e0197418.
    PubMed     Text format     Abstract available

  62. ABRAHAM PR, Devalraju KP, Jha V, Valluri VL, et al
    PPE17 (Rv1168c) protein of Mycobacterium tuberculosis detects individuals with latent TB infection.
    PLoS One. 2018;13:e0207787.
    PubMed     Text format     Abstract available

  63. VAN RIJT AM, Dik JH, Lokate M, Postma MJ, et al
    Cost analysis of outbreaks with Methicillin-resistant Staphylococcus aureus (MRSA) in Dutch long-term care facilities (LTCF).
    PLoS One. 2018;13:e0208092.
    PubMed     Text format     Abstract available

  64. CASSIOLATO AP, Almeida SCG, Andrade AL, Minamisava R, et al
    Expansion of the multidrug-resistant clonal complex 320 among invasive Streptococcus pneumoniae serotype 19A after the introduction of a ten-valent pneumococcal conjugate vaccine in Brazil.
    PLoS One. 2018;13:e0208211.
    PubMed     Text format     Abstract available


  65. Correction: Rv1460, a SufR homologue, is a repressor of the suf operon in Mycobacterium tuberculosis.
    PLoS One. 2018;13:e0208568.
    PubMed     Text format     Abstract available

  66. DOS SANTOS LM, Vieira MRMDS, Oliveira JFG, Trindade JQ, et al
    High prevalence of sexual Chlamydia trachomatis infection in young women from Marajo Island, in the Brazilian Amazon.
    PLoS One. 2018;13:e0207853.
    PubMed     Text format     Abstract available

  67. ITOH N, Hadano Y, Saito S, Myokai M, et al
    Intravenous to oral switch therapy in cancer patients with catheter-related bloodstream infection due to methicillin-sensitive Staphylococcus aureus: A single-center retrospective observational study.
    PLoS One. 2018;13:e0207413.
    PubMed     Text format     Abstract available

  68. MBUTHIA GW, Olungah CO, Ondicho TG
    Health-seeking pathway and factors leading to delays in tuberculosis diagnosis in West Pokot County, Kenya: A grounded theory study.
    PLoS One. 2018;13:e0207995.
    PubMed     Text format     Abstract available

  69. HERMES R, Saragusty J, Moser I, Barth SA, et al
    Differential detection of tuberculous and non-tuberculous mycobacteria by qPCR in lavage fluids of tuberculosis-suspicious white rhinoceros.
    PLoS One. 2018;13:e0207365.
    PubMed     Text format     Abstract available

  70. FUCHS AL, Weaver AJ Jr, Tripet BP, Ammons MCB, et al
    Characterization of the antibacterial activity of Bald's eyesalve against drug resistant Staphylococcus aureus and Pseudomonas aeruginosa.
    PLoS One. 2018;13:e0208108.
    PubMed     Text format     Abstract available

  71. VILLAGELIU D, Lyte M
    Dopamine production in Enterococcus faecium: A microbial endocrinology-based mechanism for the selection of probiotics based on neurochemical-producing potential.
    PLoS One. 2018;13:e0207038.
    PubMed     Text format     Abstract available

  72. MESHAAL MS, Labib D, Said K, Hosny M, et al
    Correction: Aspergillus endocarditis: Diagnostic criteria and predictors of outcome, A retrospective cohort study.
    PLoS One. 2018;13:e0208350.
    PubMed     Text format     Abstract available

  73. GRANGER BL
    Propeptide genesis by Kex2-dependent cleavage of yeast wall protein 1 (Ywp1) of Candida albicans.
    PLoS One. 2018;13:e0207955.
    PubMed     Text format     Abstract available

  74. LEE CU, Chong S, Choi HW, Choi JC, et al
    Quantitative image analysis using chest computed tomography in the evaluation of lymph node involvement in pulmonary sarcoidosis and tuberculosis.
    PLoS One. 2018;13:e0207959.
    PubMed     Text format     Abstract available

  75. TASSINARI M, Zannoli S, Farabegoli P, Pedna MF, et al
    Rapid diagnosis of bloodstream infections in the critically ill: Evaluation of the broad-range PCR/ESI-MS technology.
    PLoS One. 2018;13:e0197436.
    PubMed     Text format     Abstract available


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