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  Bacterial Infections and Mycoses

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19.08.2019

1 Am J Clin Pathol
1 Ann Intern Med
4 Antimicrob Agents Chemother
3 BMC Pediatr
5 Clin Infect Dis
3 Curr Microbiol
1 Diagn Microbiol Infect Dis
1 Eur J Clin Microbiol Infect Dis
1 Infect Immun
1 J Bacteriol
3 J Clin Microbiol
2 J Infect Dis
11 J Med Microbiol
3 J Urol
3 JAMA
2 Lancet
2 Lancet Glob Health
3 N Engl J Med
1 Nature
1 Pediatrics
1 PLoS Biol
1 PLoS Genet
6 PLoS One


  Retrieve available abstracts of this week’s articles:
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Single Articles


    Am J Clin Pathol

  1. GUMMA V, Bennett DL, Nguyen Thi Phong L, Duong Ngoc C, et al
    Strengthening Quality of Tuberculosis Laboratories Toward Accreditation in Viet Nam.
    Am J Clin Pathol. 2019 Aug 15. pii: 5550286. doi: 10.1093.
    PubMed     Text format     Abstract available


    Ann Intern Med

  2. DURAND CM, Bowring MG, Thomas AG, Kucirka LM, et al
    The Drug Overdose Epidemic and Deceased-Donor Transplantation in the United States: A National Registry Study.
    Ann Intern Med. 2018 Apr 17. pii: 2678899. doi: 10.7326/M17-2451.
    PubMed     Text format     Abstract available


    Antimicrob Agents Chemother

  3. WILLEMS HME, Stultz JS, Coltrane ME, Fortwendel JP, et al
    Disparate Candida albicans biofilm formation in clinical lipid emulsions due to capric acid mediated inhibition.
    Antimicrob Agents Chemother. 2019 Aug 12. pii: AAC.01394.
    PubMed     Text format     Abstract available

  4. WIEDERHOLD NP, Najvar LK, Jaramillo R, Olivo M, et al
    Extended-Interval Dosing of Rezafungin against Azole-Resistant Aspergillus fumigatus.
    Antimicrob Agents Chemother. 2019 Aug 12. pii: AAC.01165.
    PubMed     Text format     Abstract available

  5. NAKAMURA I, Ohsumi K, Takeda S, Katsumata K, et al
    ASP2397, a novel natural compound that exhibits rapid and potent fungicidal activity against Aspergillus species through a specific transporter.
    Antimicrob Agents Chemother. 2019 Aug 12. pii: AAC.02689.
    PubMed     Text format     Abstract available

  6. WANG Q, Modongo C, Allender C, Engelthaler DM, et al
    Utility of targeted, amplicon-based deep sequencing to detect resistance to first-line tuberculosis drugs in Botswana.
    Antimicrob Agents Chemother. 2019 Aug 12. pii: AAC.00982.
    PubMed     Text format     Abstract available


    BMC Pediatr

  7. AYDEMIR C, Aydemir H, Kokturk F, Kulah C, et al
    The cut-off levels of procalcitonin and C-reactive protein and the kinetics of mean platelet volume in preterm neonates with sepsis.
    BMC Pediatr. 2018;18:253.
    PubMed     Text format     Abstract available

  8. YAN HP, Li M, Lu XL, Zhu YM, et al
    Use of plasma mitochondrial DNA levels for determining disease severity and prognosis in pediatric sepsis: a case control study.
    BMC Pediatr. 2018;18:267.
    PubMed     Text format     Abstract available

  9. CUI Y, Xiong X, Wang F, Ren Y, et al
    Continuous hemofiltration improves the prognosis of bacterial sepsis complicated by liver dysfunction in children.
    BMC Pediatr. 2018;18:269.
    PubMed     Text format     Abstract available


    Clin Infect Dis

  10. FLORES AR, Shelburne SA
    Toward an understanding of group A streptococcal transmission dynamics using national-level surveillance.
    Clin Infect Dis. 2019 Aug 13. pii: 5549409. doi: 10.1093.
    PubMed     Text format    

  11. WEINER J, Domaszewska T, Donkor S, Kaufmann SHE, et al
    Changes in transcript, metabolite and antibody reactivity during the early protective immune response in humans to Mycobacterium tuberculosis infection.
    Clin Infect Dis. 2019 Aug 15. pii: 5550193. doi: 10.1093.
    PubMed     Text format     Abstract available

  12. IREGUI A, Khan Z, Malik S, Landman D, et al
    Emergence of Delafloxacin-Resistant Staphylococcus aureus in Brooklyn, NY.
    Clin Infect Dis. 2019 Aug 15. pii: 5550172. doi: 10.1093.
    PubMed     Text format     Abstract available

  13. ADEBANJO T, Apostol M, Alden N, Petit S, et al
    Evaluating Household Transmission of Invasive Group A Streptococcus Disease in the United States Using Population-Based Surveillance Data, 2013-2016.
    Clin Infect Dis. 2019 Aug 13. pii: 5549422. doi: 10.1093.
    PubMed     Text format     Abstract available

  14. JORGENSEN SCJ, Zasowski EJ, Trinh TD, Lagnf AM, et al
    Daptomycin plus beta-lactam combination therapy for methicillin-resistant Staphylococcus aureus bloodstream infections: a retrospective, comparative cohort study.
    Clin Infect Dis. 2019 Aug 12. pii: 5548921. doi: 10.1093.
    PubMed     Text format     Abstract available


    Curr Microbiol

  15. DOS SANTOS AMP, Ferrari RG, Conte-Junior CA
    Virulence Factors in Salmonella Typhimurium: The Sagacity of a Bacterium.
    Curr Microbiol. 2019;76:762-773.
    PubMed     Text format     Abstract available

  16. DICKS LMT, Mikkelsen LS, Brandsborg E, Marcotte H, et al
    Clostridium difficile, the Difficult "Kloster" Fuelled by Antibiotics.
    Curr Microbiol. 2019;76:774-782.
    PubMed     Text format     Abstract available

  17. SHIRAZI AS, Shafiei M, Solgi H, Aslani MM, et al
    Different Virulence Capabilities and ompA Expressions in ST2 and ST513 of Multidrug-Resistant Acinetobacter baumannii.
    Curr Microbiol. 2019;76:723-731.
    PubMed     Text format     Abstract available


    Diagn Microbiol Infect Dis

  18. EMILIOV T, Rodriguez-Avial I, Lopez-Diaz MDC, Culebras E, et al
    Comparative evaluation of plazomicin MICs obtained using agar dilution versus broth microdilution methods and impact of inoculum size against ESBL-producing Escherichia coli, carbapenemase-producing Klebsiella pneumoniae and methicillin-resistant Stap
    Diagn Microbiol Infect Dis. 2019 Jul 18:114867.
    PubMed     Text format     Abstract available


    Eur J Clin Microbiol Infect Dis

  19. STENMARK B, Hellmark B, Soderquist B
    Genomic analysis of Staphylococcus capitis isolated from blood cultures in neonates at a neonatal intensive care unit in Sweden.
    Eur J Clin Microbiol Infect Dis. 2019 Aug 9. pii: 10.1007/s10096-019-03647.
    PubMed     Text format     Abstract available


    Infect Immun

  20. OLSON MG, Widner RE, Jorgenson LM, Lawrence A, et al
    Proximity Labeling to Map Host-Pathogen Interactions at the Membrane of a Bacteria Containing Vacuole in Chlamydia trachomatis Infected Human Cells.
    Infect Immun. 2019 Aug 12. pii: IAI.00537-19. doi: 10.1128/IAI.00537.
    PubMed     Text format     Abstract available


    J Bacteriol

  21. WU X, Gordon O, Jiang W, Antezana BS, et al
    Interaction between Streptococcus pneumoniae and Staphylococcus aureus generates (*)OH radicals that rapidly kills Staphylococcus aureus strains.
    J Bacteriol. 2019 Aug 12. pii: JB.00474-19. doi: 10.1128/JB.00474.
    PubMed     Text format     Abstract available


    J Clin Microbiol

  22. AMBARAGHASSI G, Dufresne PJ, Dufresne SF, Vallieres E, et al
    Identification of Candida auris using the updated 8.01 VITEK(R)2 yeast identification system: a multi-laboratory evaluation study.
    J Clin Microbiol. 2019 Aug 14. pii: JCM.00884-19. doi: 10.1128/JCM.00884.
    PubMed     Text format     Abstract available

  23. CANVER MC, Tekle T, Compton ST, Callan K, et al
    Performance of Five Commercial Identification Platforms for the Identification of Staphylococcus delphini.
    J Clin Microbiol. 2019 Aug 14. pii: JCM.00721-19. doi: 10.1128/JCM.00721.
    PubMed     Text format     Abstract available

  24. NG KCS, Supply P, Cobelens FGJ, Gaudin C, et al
    How well do routine molecular diagnostics detect rifampicin heteroresistance in Mycobacterium tuberculosis?
    J Clin Microbiol. 2019 Aug 14. pii: JCM.00717-19. doi: 10.1128/JCM.00717.
    PubMed     Text format     Abstract available


    J Infect Dis

  25. WU Q, Hossfeld A, Gerberick A, Saljoughian N, et al
    Mycobacterium tuberculosis enhances macrophage P-glycoprotein (MDR1) expression and activity to promote intracellular survival during anti-TB drug treatment.
    J Infect Dis. 2019 Aug 14. pii: 5549997. doi: 10.1093.
    PubMed     Text format     Abstract available

  26. SWIDERGALL M, Khalaji M, Solis NV, Moyes DL, et al
    Candidalysin Is Required for Neutrophil Recruitment and Virulence During Systemic Candida albicans Infection.
    J Infect Dis. 2019 Aug 11. pii: 5546010. doi: 10.1093.
    PubMed     Text format     Abstract available


    J Med Microbiol

  27. MARTIN A, Godino IT, Aguilar-Ayala DA, Mathys V, et al
    In vitro activity of bedaquiline against slow-growing nontuberculous mycobacteria.
    J Med Microbiol. 2019;68:1137-1139.
    PubMed     Text format     Abstract available

  28. DOLZANI L, Milan A, Scocchi M, Lagatolla C, et al
    Sub-MIC effects of a proline-rich antibacterial peptide on clinical isolates of Acinetobacter baumannii.
    J Med Microbiol. 2019;68:1253-1265.
    PubMed     Text format     Abstract available

  29. CHAN JC, Chong CY, Thoon KC, Tee NWS, et al
    Invasive paediatric Elizabethkingia meningoseptica infections are best treated with a combination of piperacillin/tazobactam and trimethoprim/sulfamethoxazole or fluoroquinolone.
    J Med Microbiol. 2019;68:1167-1172.
    PubMed     Text format     Abstract available

  30. PEETERS M, Ombelet S, Chung P, Tsoumanis A, et al
    Slow growth of Burkholderia pseudomallei compared to other pathogens in an adapted blood culture system in Phnom Penh, Cambodia.
    J Med Microbiol. 2019;68:1159-1166.
    PubMed     Text format     Abstract available

  31. WHITESIDE SA, Dave S, Reid G, Burton JP, et al
    Ibuprofen lacks direct antimicrobial properties for the treatment of urinary tract infection isolates.
    J Med Microbiol. 2019 Jun 11. doi: 10.1099/jmm.0.001017.
    PubMed     Text format     Abstract available

  32. TANAKA E, Wajima T, Noguchi N
    Earlier generation quinolones can be useful in identifying Haemophilus influenzae strains with low susceptibility to quinolone isolated from paediatric patients.
    J Med Microbiol. 2019;68:1227-1232.
    PubMed     Text format     Abstract available

  33. SOARES LS, Lima ABF, Pantoja KC, Lobo PS, et al
    Molecular epidemiology of human bocavirus in children with acute gastroenteritis from North Region of Brazil.
    J Med Microbiol. 2019;68:1233-1239.
    PubMed     Text format     Abstract available

  34. WEN S, Lv F, Chen X, Zhu L, et al
    Application of a nucleic acid-based multiplex kit to identify viral and atypical bacterial aetiology of lower respiratory tract infection in hospitalized children.
    J Med Microbiol. 2019;68:1211-1218.
    PubMed     Text format     Abstract available

  35. BELDA-ORLOWSKI A, Pfennigwerth N, Gatermann SG, Korte-Berwanger M, et al
    Evaluation and readout optimization of the rapid polymyxin NP test for the detection of colistin-resistant Enterobacteriaceae.
    J Med Microbiol. 2019;68:1189-1193.
    PubMed     Text format     Abstract available

  36. SAKAI J, Tarumoto N, Kodana M, Ashikawa S, et al
    An identification protocol for ESBL-producing Gram-negative bacteria bloodstream infections using a MinION nanopore sequencer.
    J Med Microbiol. 2019;68:1219-1226.
    PubMed     Text format     Abstract available

  37. HARE KM, Seib KL, Chang AB, Harris TM, et al
    Antimicrobial susceptibility and impact of macrolide antibiotics on Moraxella catarrhalis in the upper and lower airways of children with chronic endobronchial suppuration.
    J Med Microbiol. 2019;68:1140-1147.
    PubMed     Text format     Abstract available


    J Urol

  38. YAGHOUBIAN A, Batter T, Mozafarpour S, Sacco D, et al
    Use of the Quick Sequential Organ Failure Assessment Score for Prediction of Intensive Care Unit Admission Due to Septic Shock after Percutaneous Nephrolithotomy: A Multicenter Study.
    J Urol. 2019;202:314-318.
    PubMed     Text format     Abstract available

  39. WANG HH, Kurtz M, Logvinenko T, Nelson C, et al
    Why Does Prevention of Recurrent Urinary Tract Infection not Result in Less Renal Scarring? A Deeper Dive into the RIVUR Trial.
    J Urol. 2019;202:400-405.
    PubMed     Text format     Abstract available

  40. ANGER J, Lee U, A Lenore Ackerman R, Chou, et al
    Recurrent Uncomplicated Urinary Tract Infections In Women: Aua/Cua/Sufu Guideline.
    J Urol. 2019 May 1:101097JU0000000000000296. doi: 10.1097/JU.0000000000000296.
    PubMed     Text format     Abstract available


    JAMA

  41. VAN DER POLL T
    Recombinant Human Soluble Thrombomodulin in Patients With Sepsis-Associated Coagulopathy: Another Negative Sepsis Trial?
    JAMA. 2019;321:1978-1980.
    PubMed     Text format    

  42. KNAUS WA, Marks RD
    New Phenotypes for Sepsis: The Promise and Problem of Applying Machine Learning and Artificial Intelligence in Clinical Research.
    JAMA. 2019;321:1981-1982.
    PubMed     Text format    

  43. RUBIN R
    Why Are Mothers Still Passing Syphilis to Their Babies?
    JAMA. 2019 Feb 6. pii: 2724373. doi: 10.1001/jama.2018.20843.
    PubMed     Text format    


    Lancet

  44. CARLSON CJ, Mendenhall E
    Preparing for emerging infections means expecting new syndemics.
    Lancet. 2019;394:297.
    PubMed     Text format    

  45. LAVOIE PM, Popescu CR, Molyneux EM, Wynn JL, et al
    Rethinking management of neonates at risk of sepsis.
    Lancet. 2019;394:279-281.
    PubMed     Text format    


    Lancet Glob Health

  46. LAND JA, Ambrosino E
    Prevalence of Chlamydia trachomatis infections in the Middle East and north Africa, what next?
    Lancet Glob Health. 2019;7:e1152-e1153.
    PubMed     Text format    

  47. SMOLAK A, Chemaitelly H, Hermez JG, Low N, et al
    Epidemiology of Chlamydia trachomatis in the Middle East and north Africa: a systematic review, meta-analysis, and meta-regression.
    Lancet Glob Health. 2019;7:e1197-e1225.
    PubMed     Text format     Abstract available


    N Engl J Med

  48. CROWE SE
    Helicobacter pylori Infection. Reply.
    N Engl J Med. 2019;381:588-589.
    PubMed     Text format    

  49. FALLONE CA, Moss SF, Malfertheiner P
    Helicobacter pylori Infection.
    N Engl J Med. 2019;381:588.
    PubMed     Text format    

  50. GRAHAM DY, Dang BN, El-Serag HB
    Helicobacter pylori Infection.
    N Engl J Med. 2019;381:587-588.
    PubMed     Text format    


    Nature

  51. WOOD CS, Thomas MR, Budd J, Mashamba-Thompson TP, et al
    Taking connected mobile-health diagnostics of infectious diseases to the field.
    Nature. 2019;566:467-474.
    PubMed     Text format     Abstract available


    Pediatrics

  52. WANG ME, Biondi EA, McCulloh RJ, Garber MD, et al
    Testing for Meningitis in Febrile Well-Appearing Young Infants With a Positive Urinalysis.
    Pediatrics. 2019 Aug 8. pii: peds.2018-3979. doi: 10.1542/peds.2018-3979.
    PubMed     Text format     Abstract available


    PLoS Biol

  53. RAI LS, Singha R, Sanchez H, Chakraborty T, et al
    The Candida albicans biofilm gene circuit modulated at the chromatin level by a recent molecular histone innovation.
    PLoS Biol. 2019;17:e3000422.
    PubMed     Text format     Abstract available


    PLoS Genet

  54. TRACHSEL E, Redder P, Linder P, Armitano J, et al
    Genetic screens reveal novel major and minor players in magnesium homeostasis of Staphylococcus aureus.
    PLoS Genet. 2019;15:e1008336.
    PubMed     Text format     Abstract available


    PLoS One

  55. MATHIASEN VD, Eiset AH, Andersen PH, Wejse C, et al
    Epidemiology of tuberculous lymphadenitis in Denmark: A nationwide register-based study.
    PLoS One. 2019;14:e0221232.
    PubMed     Text format     Abstract available

  56. SABRI A, Quistrebert J, Naji Amrani H, Abid A, et al
    Prevalence and risk factors for latent tuberculosis infection among healthcare workers in Morocco.
    PLoS One. 2019;14:e0221081.
    PubMed     Text format     Abstract available

  57. PHILLIPS S, Quigley BL, Aziz A, Bergen W, et al
    Antibiotic treatment of Chlamydia-induced cystitis in the koala is linked to expression of key inflammatory genes in reactive oxygen pathways.
    PLoS One. 2019;14:e0221109.
    PubMed     Text format     Abstract available

  58. FLORES-TREVINO S, Rodriguez-Noriega E, Garza-Gonzalez E, Gonzalez-Diaz E, et al
    Clinical predictors of drug-resistant tuberculosis in Mexico.
    PLoS One. 2019;14:e0220946.
    PubMed     Text format     Abstract available

  59. ANTHWAL D, Lavania S, Gupta RK, Verma A, et al
    Development and evaluation of novel bio-safe filter paper-based kits for sputum microscopy and transport to directly detect Mycobacterium tuberculosis and associated drug resistance.
    PLoS One. 2019;14:e0220967.
    PubMed     Text format     Abstract available

  60. ALENE KA, Clements ACA
    Spatial clustering of notified tuberculosis in Ethiopia: A nationwide study.
    PLoS One. 2019;14:e0221027.
    PubMed     Text format     Abstract available


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