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Articles published in PLoS Comput Biol

Retrieve available abstracts of 23 articles:
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Single Articles

    July 2022
  1. ANGELINI E, Wang Y, Zhou JX, Qian H, et al
    A model for the intrinsic limit of cancer therapy: Duality of treatment-induced cell death and treatment-induced stemness.
    PLoS Comput Biol. 2022;18:e1010319.
    PubMed     Abstract available

    June 2022
  2. MAHADEVAN AS, Long BL, Hu CW, Ryan DT, et al
    cytoNet: Spatiotemporal network analysis of cell communities.
    PLoS Comput Biol. 2022;18:e1009846.
    PubMed     Abstract available

    May 2022
  3. UHL P, Lowengrub J, Komarova N, Wodarz D, et al
    Spatial dynamics of feedback and feedforward regulation in cell lineages.
    PLoS Comput Biol. 2022;18:e1010039.
    PubMed     Abstract available

    April 2022
  4. FASSINA D, Costa CM, Longobardi S, Karabelas E, et al
    Modelling the interaction between stem cells derived cardiomyocytes patches and host myocardium to aid non-arrhythmic engineered heart tissue design.
    PLoS Comput Biol. 2022;18:e1010030.
    PubMed     Abstract available

    January 2022
  5. DONOVAN-MAIYE RM, Brown JM, Chan CK, Ding L, et al
    A deep generative model of 3D single-cell organization.
    PLoS Comput Biol. 2022;18:e1009155.
    PubMed     Abstract available

  6. HANDZLIK JE, Manu
    Data-driven modeling predicts gene regulatory network dynamics during the differentiation of multipotential hematopoietic progenitors.
    PLoS Comput Biol. 2022;18:e1009779.
    PubMed     Abstract available

    November 2021
  7. JIANG Z, Generoso SF, Badia M, Payer B, et al
    A conserved expression signature predicts growth rate and reveals cell & lineage-specific differences.
    PLoS Comput Biol. 2021;17:e1009582.
    PubMed     Abstract available

    October 2021
  8. LEE J, Kim JS, Kim Y
    Atorvastatin-mediated rescue of cancer-related cognitive changes in combined anticancer therapies.
    PLoS Comput Biol. 2021;17:e1009457.
    PubMed     Abstract available

  9. ZHAO B, Zhang K, Chen CS, Lejeune E, et al
    Sarc-Graph: Automated segmentation, tracking, and analysis of sarcomeres in hiPSC-derived cardiomyocytes.
    PLoS Comput Biol. 2021;17:e1009443.
    PubMed     Abstract available

    September 2021
  10. KANNAN S, Farid M, Lin BL, Miyamoto M, et al
    Transcriptomic entropy benchmarks stem cell-derived cardiomyocyte maturation against endogenous tissue at single cell level.
    PLoS Comput Biol. 2021;17:e1009305.
    PubMed     Abstract available

  11. GONZALEZ-RAMIREZ M, Ballare C, Mugianesi F, Beringer M, et al
    Differential contribution to gene expression prediction of histone modifications at enhancers or promoters.
    PLoS Comput Biol. 2021;17:e1009368.
    PubMed     Abstract available

    August 2021
  12. JAEGER KH, Edwards AG, Giles WR, Tveito A, et al
    A computational method for identifying an optimal combination of existing drugs to repair the action potentials of SQT1 ventricular myocytes.
    PLoS Comput Biol. 2021;17:e1009233.
    PubMed     Abstract available

    July 2021
  13. ZHU K, Cai L, Cui C, de Los Toyos JR, et al
    Single-cell analysis reveals the pan-cancer invasiveness-associated transition of adipose-derived stromal cells into COL11A1-expressing cancer-associated fibroblasts.
    PLoS Comput Biol. 2021;17:e1009228.
    PubMed     Abstract available

  14. COY R, Berg M, Phillips JB, Shipley RJ, et al
    Modelling-informed cell-seeded nerve repair construct designs for treating peripheral nerve injuries.
    PLoS Comput Biol. 2021;17:e1009142.
    PubMed     Abstract available

    March 2021
  15. BROWN J, Barry C, Schmitz MT, Argus C, et al
    Interspecies chimeric conditions affect the developmental rate of human pluripotent stem cells.
    PLoS Comput Biol. 2021;17:e1008778.
    PubMed     Abstract available

    February 2021
  16. JAEGER KH, Wall S, Tveito A
    Computational prediction of drug response in short QT syndrome type 1 based on measurements of compound effect in stem cell-derived cardiomyocytes.
    PLoS Comput Biol. 2021;17:e1008089.
    PubMed     Abstract available

    January 2021
  17. MARTINEZ-GARCIA PM, Garcia-Torres M, Divina F, Terron-Bautista J, et al
    Genome-wide prediction of topoisomerase IIbeta binding by architectural factors and chromatin accessibility.
    PLoS Comput Biol. 2021;17:e1007814.
    PubMed     Abstract available

  18. LOUIE W, Shen MW, Tahiry Z, Zhang S, et al
    Machine learning based CRISPR gRNA design for therapeutic exon skipping.
    PLoS Comput Biol. 2021;17:e1008605.
    PubMed     Abstract available

  19. GIAMMONA J, Campas O
    Physical constraints on early blastomere packings.
    PLoS Comput Biol. 2021;17:e1007994.
    PubMed     Abstract available

    December 2020
  20. CARCAMO-ORIVE I, Henrion MYR, Zhu K, Beckmann ND, et al
    Predictive network modeling in human induced pluripotent stem cells identifies key driver genes for insulin responsiveness.
    PLoS Comput Biol. 2020;16:e1008491.
    PubMed     Abstract available

    October 2020
  21. LIU YYF, Lu Y, Oh S, Conduit GJ, et al
    Machine learning to predict mesenchymal stem cell efficacy for cartilage repair.
    PLoS Comput Biol. 2020;16:e1008275.
    PubMed     Abstract available

    September 2020
  22. TRAN TN, Bader GD
    Tempora: Cell trajectory inference using time-series single-cell RNA sequencing data.
    PLoS Comput Biol. 2020;16:e1008205.
    PubMed     Abstract available

  23. RAPHEL F, De Korte T, Lombardi D, Braam S, et al
    A greedy classifier optimization strategy to assess ion channel blocking activity and pro-arrhythmia in hiPSC-cardiomyocytes.
    PLoS Comput Biol. 2020;16:e1008203.
    PubMed     Abstract available

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