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Articles published in PLoS Comput Biol

Retrieve available abstracts of 25 articles:
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Single Articles


    July 2019
  1. ZHOU D, Luo Y, Dingli D, Traulsen A, et al
    The invasion of de-differentiating cancer cells into hierarchical tissues.
    PLoS Comput Biol. 2019;15:e1007167.
    PubMed     Text format     Abstract available


    May 2019
  2. SHARMA AK, Sormanni P, Ahmed N, Ciryam P, et al
    A chemical kinetic basis for measuring translation initiation and elongation rates from ribosome profiling data.
    PLoS Comput Biol. 2019;15:e1007070.
    PubMed     Text format     Abstract available


    April 2019
  3. PARK DS, Akuffo AA, Muench DE, Grimes HL, et al
    Clonal hematopoiesis of indeterminate potential and its impact on patient trajectories after stem cell transplantation.
    PLoS Comput Biol. 2019;15:e1006913.
    PubMed     Text format     Abstract available


    March 2019
  4. YE Y, Kang X, Bailey J, Li C, et al
    An enriched network motif family regulates multistep cell fate transitions with restricted reversibility.
    PLoS Comput Biol. 2019;15:e1006855.
    PubMed     Text format     Abstract available


  5. KHEIFETZ Y, Scholz M
    Modeling individual time courses of thrombopoiesis during multi-cyclic chemotherapy.
    PLoS Comput Biol. 2019;15:e1006775.
    PubMed     Text format     Abstract available


    January 2019
  6. OSTBLOM J, Nazareth EJP, Tewary M, Zandstra PW, et al
    Context-explorer: Analysis of spatially organized protein expression in high-throughput screens.
    PLoS Comput Biol. 2019;15:e1006384.
    PubMed     Text format     Abstract available


    November 2018
  7. CROOK OM, Mulvey CM, Kirk PDW, Lilley KS, et al
    A Bayesian mixture modelling approach for spatial proteomics.
    PLoS Comput Biol. 2018;14:e1006516.
    PubMed     Text format     Abstract available


    October 2018
  8. XU S, Kim S, Chen ISY, Chou T, et al
    Modeling large fluctuations of thousands of clones during hematopoiesis: The role of stem cell self-renewal and bursty progenitor dynamics in rhesus macaque.
    PLoS Comput Biol. 2018;14:e1006489.
    PubMed     Text format     Abstract available


    September 2018
  9. BRACKSTON RD, Lakatos E, Stumpf MPH
    Transition state characteristics during cell differentiation.
    PLoS Comput Biol. 2018;14:e1006405.
    PubMed     Text format     Abstract available


    August 2018
  10. TSE MJ, Chu BK, Gallivan CP, Read EL, et al
    Rare-event sampling of epigenetic landscapes and phenotype transitions.
    PLoS Comput Biol. 2018;14:e1006336.
    PubMed     Text format     Abstract available


    June 2018
  11. MON PERE N, Lenaerts T, Pacheco JM, Dingli D, et al
    Evolutionary dynamics of paroxysmal nocturnal hemoglobinuria.
    PLoS Comput Biol. 2018;14:e1006133.
    PubMed     Text format     Abstract available


    April 2018
  12. ZHANG H, Lee CAA, Li Z, Garbe JR, et al
    A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa.
    PLoS Comput Biol. 2018;14:e1006053.
    PubMed     Text format     Abstract available


  13. SCHOTT B, Traub M, Schlagenhauf C, Takamiya M, et al
    EmbryoMiner: A new framework for interactive knowledge discovery in large-scale cell tracking data of developing embryos.
    PLoS Comput Biol. 2018;14:e1006128.
    PubMed     Text format     Abstract available


    March 2018
  14. DUFOUR A, Gontran E, Deroulers C, Varlet P, et al
    Modeling the dynamics of oligodendrocyte precursor cells and the genesis of gliomas.
    PLoS Comput Biol. 2018;14:e1005977.
    PubMed     Text format     Abstract available


  15. LUO Y, He J, Xu X, Sun MA, et al
    Integrative single-cell omics analyses reveal epigenetic heterogeneity in mouse embryonic stem cells.
    PLoS Comput Biol. 2018;14:e1006034.
    PubMed     Text format     Abstract available


    February 2018
  16. DU H, Wang Y, Haensel D, Lee B, et al
    Multiscale modeling of layer formation in epidermis.
    PLoS Comput Biol. 2018;14:e1006006.
    PubMed     Text format     Abstract available


  17. LIN YT, Hufton PG, Lee EJ, Potoyan DA, et al
    A stochastic and dynamical view of pluripotency in mouse embryonic stem cells.
    PLoS Comput Biol. 2018;14:e1006000.
    PubMed     Text format     Abstract available


  18. ALVARADO C, Fider NA, Wearing HJ, Komarova NL, et al
    Optimizing homeostatic cell renewal in hierarchical tissues.
    PLoS Comput Biol. 2018;14:e1005967.
    PubMed     Text format     Abstract available


  19. PALM MM, Elemans M, Beltman JB
    Heritable tumor cell division rate heterogeneity induces clonal dominance.
    PLoS Comput Biol. 2018;14:e1005954.
    PubMed     Text format     Abstract available


    January 2018
  20. NAZARI F, Pearson AT, Nor JE, Jackson TL, et al
    A mathematical model for IL-6-mediated, stem cell driven tumor growth and targeted treatment.
    PLoS Comput Biol. 2018;14:e1005920.
    PubMed     Text format     Abstract available


  21. KIMMEL JC, Chang AY, Brack AS, Marshall WF, et al
    Inferring cell state by quantitative motility analysis reveals a dynamic state system and broken detailed balance.
    PLoS Comput Biol. 2018;14:e1005927.
    PubMed     Text format     Abstract available


  22. DI MININ G, Postlmayr A, Wutz A
    HaSAPPy: A tool for candidate identification in pooled forward genetic screens of haploid mammalian cells.
    PLoS Comput Biol. 2018;14:e1005950.
    PubMed     Text format     Abstract available


    October 2017
  23. ASHCROFT P, Manz MG, Bonhoeffer S
    Clonal dominance and transplantation dynamics in hematopoietic stem cell compartments.
    PLoS Comput Biol. 2017;13:e1005803.
    PubMed     Text format     Abstract available


  24. KAKUMANU A, Velasco S, Mazzoni E, Mahony S, et al
    Deconvolving sequence features that discriminate between overlapping regulatory annotations.
    PLoS Comput Biol. 2017;13:e1005795.
    PubMed     Text format     Abstract available


    September 2017
  25. GREAVES RB, Dietmann S, Smith A, Stepney S, et al
    A conceptual and computational framework for modelling and understanding the non-equilibrium gene regulatory networks of mouse embryonic stem cells.
    PLoS Comput Biol. 2017;13:e1005713.
    PubMed     Text format     Abstract available


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