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Articles published in PLoS Comput Biol

Retrieve available abstracts of 50 articles:
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Single Articles


    November 2017
  1. LOPEZ-PERSEM A, Rigoux L, Bourgeois-Gironde S, Daunizeau J, et al
    Choose, rate or squeeze: Comparison of economic value functions elicited by different behavioral tasks.
    PLoS Comput Biol. 2017;13:e1005848.
    PubMed     Text format     Abstract available


  2. RAKOWSKI F, Karbowski J
    Optimal synaptic signaling connectome for locomotory behavior in Caenorhabditis elegans: Design minimizing energy cost.
    PLoS Comput Biol. 2017;13:e1005834.
    PubMed     Text format     Abstract available


    October 2017
  3. KOTELNIKOVA E, Kiani NA, Abad E, Martinez-Lapiscina EH, et al
    Dynamics and heterogeneity of brain damage in multiple sclerosis.
    PLoS Comput Biol. 2017;13:e1005757.
    PubMed     Text format     Abstract available


  4. XU M, Papageorgiou DP, Abidi SZ, Dao M, et al
    A deep convolutional neural network for classification of red blood cells in sickle cell anemia.
    PLoS Comput Biol. 2017;13:e1005746.
    PubMed     Text format     Abstract available


  5. VEDULA V, Lee J, Xu H, Kuo CJ, et al
    A method to quantify mechanobiologic forces during zebrafish cardiac development using 4-D light sheet imaging and computational modeling.
    PLoS Comput Biol. 2017;13:e1005828.
    PubMed     Text format     Abstract available


  6. RUBIN TN, Koyejo O, Gorgolewski KJ, Jones MN, et al
    Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.
    PLoS Comput Biol. 2017;13:e1005649.
    PubMed     Text format     Abstract available


    September 2017
  7. VILLOUTREIX P, Anden J, Lim B, Lu H, et al
    Synthesizing developmental trajectories.
    PLoS Comput Biol. 2017;13:e1005742.
    PubMed     Text format     Abstract available


  8. DE HAAN W, van Straaten ECW, Gouw AA, Stam CJ, et al
    Altering neuronal excitability to preserve network connectivity in a computational model of Alzheimer's disease.
    PLoS Comput Biol. 2017;13:e1005707.
    PubMed     Text format     Abstract available


  9. CHEN Y, Wang S, Hilgetag CC, Zhou C, et al
    Features of spatial and functional segregation and integration of the primate connectome revealed by trade-off between wiring cost and efficiency.
    PLoS Comput Biol. 2017;13:e1005776.
    PubMed     Text format     Abstract available


  10. KALLENBERGER SM, Unger AL, Legewie S, Lymperopoulos K, et al
    Correlated receptor transport processes buffer single-cell heterogeneity.
    PLoS Comput Biol. 2017;13:e1005779.
    PubMed     Text format     Abstract available


    August 2017
  11. BEJJANKI VR, da Silveira RA, Cohen JD, Turk-Browne NB, et al
    Noise correlations in the human brain and their impact on pattern classification.
    PLoS Comput Biol. 2017;13:e1005674.
    PubMed     Text format     Abstract available


  12. HELLYER PJ, Clopath C, Kehagia AA, Turkheimer FE, et al
    From homeostasis to behavior: Balanced activity in an exploration of embodied dynamic environmental-neural interaction.
    PLoS Comput Biol. 2017;13:e1005721.
    PubMed     Text format     Abstract available


    July 2017
  13. OBLAK EF, Lewis-Peacock JA, Sulzer JS
    Self-regulation strategy, feedback timing and hemodynamic properties modulate learning in a simulated fMRI neurofeedback environment.
    PLoS Comput Biol. 2017;13:e1005681.
    PubMed     Text format     Abstract available


  14. CARLIN JD, Kriegeskorte N
    Adjudicating between face-coding models with individual-face fMRI responses.
    PLoS Comput Biol. 2017;13:e1005604.
    PubMed     Text format     Abstract available


  15. SERRA F, Bau D, Goodstadt M, Castillo D, et al
    Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors.
    PLoS Comput Biol. 2017;13:e1005665.
    PubMed     Text format     Abstract available


  16. BOTTIER M, Blanchon S, Pelle G, Bequignon E, et al
    A new index for characterizing micro-bead motion in a flow induced by ciliary beating: Part I, experimental analysis.
    PLoS Comput Biol. 2017;13:e1005605.
    PubMed     Text format     Abstract available


    June 2017
  17. OCKER GK, Josic K, Shea-Brown E, Buice MA, et al
    Linking structure and activity in nonlinear spiking networks.
    PLoS Comput Biol. 2017;13:e1005583.
    PubMed     Text format     Abstract available


  18. OUELLET M, Guillebaud G, Gervais V, Lupien St-Pierre D, et al
    A novel algorithm identifies stress-induced alterations in mitochondrial connectivity and inner membrane structure from confocal images.
    PLoS Comput Biol. 2017;13:e1005612.
    PubMed     Text format     Abstract available


  19. WANG MB, Owen JP, Mukherjee P, Raj A, et al
    Brain network eigenmodes provide a robust and compact representation of the structural connectome in health and disease.
    PLoS Comput Biol. 2017;13:e1005550.
    PubMed     Text format     Abstract available


  20. ROMANO SA, Perez-Schuster V, Jouary A, Boulanger-Weill J, et al
    An integrated calcium imaging processing toolbox for the analysis of neuronal population dynamics.
    PLoS Comput Biol. 2017;13:e1005526.
    PubMed     Text format     Abstract available


    May 2017
  21. NGUYEN JP, Linder AN, Plummer GS, Shaevitz JW, et al
    Automatically tracking neurons in a moving and deforming brain.
    PLoS Comput Biol. 2017;13:e1005517.
    PubMed     Text format     Abstract available


  22. WEILNHAMMER V, Stuke H, Hesselmann G, Sterzer P, et al
    A predictive coding account of bistable perception - a model-based fMRI study.
    PLoS Comput Biol. 2017;13:e1005536.
    PubMed     Text format     Abstract available


    April 2017
  23. DIEDRICHSEN J, Kriegeskorte N
    Representational models: A common framework for understanding encoding, pattern-component, and representational-similarity analysis.
    PLoS Comput Biol. 2017;13:e1005508.
    PubMed     Text format     Abstract available


    March 2017
  24. FRIEDRICH J, Zhou P, Paninski L
    Fast online deconvolution of calcium imaging data.
    PLoS Comput Biol. 2017;13:e1005423.
    PubMed     Text format     Abstract available


  25. GORGOLEWSKI KJ, Alfaro-Almagro F, Auer T, Bellec P, et al
    BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.
    PLoS Comput Biol. 2017;13:e1005209.
    PubMed     Text format     Abstract available


  26. HAY E, Ritter P, Lobaugh NJ, McIntosh AR, et al
    Multiregional integration in the brain during resting-state fMRI activity.
    PLoS Comput Biol. 2017;13:e1005410.
    PubMed     Text format     Abstract available


    February 2017
  27. ZHANG Y, Abiraman K, Li H, Pierce DM, et al
    Modeling of the axon membrane skeleton structure and implications for its mechanical properties.
    PLoS Comput Biol. 2017;13:e1005407.
    PubMed     Text format     Abstract available


  28. KLEIN A, Ghosh SS, Bao FS, Giard J, et al
    Mindboggling morphometry of human brains.
    PLoS Comput Biol. 2017;13:e1005350.
    PubMed     Text format     Abstract available


  29. SCHUECKER J, Schmidt M, van Albada SJ, Diesmann M, et al
    Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome.
    PLoS Comput Biol. 2017;13:e1005179.
    PubMed     Text format     Abstract available


    January 2017
  30. HINNE M, Meijers A, Bakker R, Tiesinga PH, et al
    The missing link: Predicting connectomes from noisy and partially observed tract tracing data.
    PLoS Comput Biol. 2017;13:e1005374.
    PubMed     Text format     Abstract available


  31. WHEELER RJ
    Use of chiral cell shape to ensure highly directional swimming in trypanosomes.
    PLoS Comput Biol. 2017;13:e1005353.
    PubMed     Text format     Abstract available


  32. POHL O, Hintsche M, Alirezaeizanjani Z, Seyrich M, et al
    Inferring the Chemotactic Strategy of P. putida and E. coli Using Modified Kramers-Moyal Coefficients.
    PLoS Comput Biol. 2017;13:e1005329.
    PubMed     Text format     Abstract available


  33. JONAS E, Kording KP
    Could a Neuroscientist Understand a Microprocessor?
    PLoS Comput Biol. 2017;13:e1005268.
    PubMed     Text format     Abstract available


  34. DE VICO FALLANI F, Latora V, Chavez M
    A Topological Criterion for Filtering Information in Complex Brain Networks.
    PLoS Comput Biol. 2017;13:e1005305.
    PubMed     Text format     Abstract available


  35. KUNERT JM, Proctor JL, Brunton SL, Kutz JN, et al
    Spatiotemporal Feedback and Network Structure Drive and Encode Caenorhabditis elegans Locomotion.
    PLoS Comput Biol. 2017;13:e1005303.
    PubMed     Text format     Abstract available


  36. KUNERT JM, Maia PD, Kutz JN
    Functionality and Robustness of Injured Connectomic Dynamics in C. elegans: Linking Behavioral Deficits to Neural Circuit Damage.
    PLoS Comput Biol. 2017;13:e1005261.
    PubMed     Text format     Abstract available


  37. LIANG H, Wang H
    Structure-Function Network Mapping and Its Assessment via Persistent Homology.
    PLoS Comput Biol. 2017;13:e1005325.
    PubMed     Text format     Abstract available


    May 2016
  38. GRIFFITH T, Tsaneva-Atanasova K, Mellor JR
    Control of Ca2+ Influx and Calmodulin Activation by SK-Channels in Dendritic Spines.
    PLoS Comput Biol. 2016;12:e1004949.
    PubMed     Text format     Abstract available


  39. MOURAD R, Cuvier O
    Computational Identification of Genomic Features That Influence 3D Chromatin Domain Formation.
    PLoS Comput Biol. 2016;12:e1004908.
    PubMed     Text format     Abstract available


  40. TIAN P, Best RB
    Structural Determinants of Misfolding in Multidomain Proteins.
    PLoS Comput Biol. 2016;12:e1004933.
    PubMed     Text format     Abstract available


  41. HETMANSKI JH, Zindy E, Schwartz JM, Caswell PT, et al
    A MAPK-Driven Feedback Loop Suppresses Rac Activity to Promote RhoA-Driven Cancer Cell Invasion.
    PLoS Comput Biol. 2016;12:e1004909.
    PubMed     Text format     Abstract available


    April 2016
  42. EMAKO C, Gayrard C, Buguin A, Neves de Almeida L, et al
    Traveling Pulses for a Two-Species Chemotaxis Model.
    PLoS Comput Biol. 2016;12:e1004843.
    PubMed     Text format     Abstract available


    March 2016
  43. NIJHOF B, Castells-Nobau A, Wolf L, Scheffer-de Gooyert JM, et al
    A New Fiji-Based Algorithm That Systematically Quantifies Nine Synaptic Parameters Provides Insights into Drosophila NMJ Morphometry.
    PLoS Comput Biol. 2016;12:e1004823.
    PubMed     Text format     Abstract available


  44. GILSON M, Moreno-Bote R, Ponce-Alvarez A, Ritter P, et al
    Estimation of Directed Effective Connectivity from fMRI Functional Connectivity Hints at Asymmetries of Cortical Connectome.
    PLoS Comput Biol. 2016;12:e1004762.
    PubMed     Text format     Abstract available


  45. PENNY W, Sengupta B
    Annealed Importance Sampling for Neural Mass Models.
    PLoS Comput Biol. 2016;12:e1004797.
    PubMed     Text format     Abstract available


    February 2016
  46. CHAY A, Zamparo I, Koschinski A, Zaccolo M, et al
    Control of betaAR- and N-methyl-D-aspartate (NMDA) Receptor-Dependent cAMP Dynamics in Hippocampal Neurons.
    PLoS Comput Biol. 2016;12:e1004735.
    PubMed     Text format     Abstract available


  47. RAHMATI V, Kirmse K, Markovic D, Holthoff K, et al
    Inferring Neuronal Dynamics from Calcium Imaging Data Using Biophysical Models and Bayesian Inference.
    PLoS Comput Biol. 2016;12:e1004736.
    PubMed     Text format     Abstract available


  48. SALMELA VR, Henriksson L, Vanni S
    Radial Frequency Analysis of Contour Shapes in the Visual Cortex.
    PLoS Comput Biol. 2016;12:e1004719.
    PubMed     Text format     Abstract available


  49. TAKEMURA H, Caiafa CF, Wandell BA, Pestilli F, et al
    Ensemble Tractography.
    PLoS Comput Biol. 2016;12:e1004692.
    PubMed     Text format     Abstract available


    January 2016
  50. MILLER KJ, Schalk G, Hermes D, Ojemann JG, et al
    Spontaneous Decoding of the Timing and Content of Human Object Perception from Cortical Surface Recordings Reveals Complementary Information in the Event-Related Potential and Broadband Spectral Change.
    PLoS Comput Biol. 2016;12:e1004660.
    PubMed     Text format     Abstract available


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