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  Genetics

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03.10.2017

2 BMC Cancer
2 BMC Genet
1 Cell
2 Nat Rev Genet
2 PLoS Biol
2 PLoS Comput Biol
48 PLoS One
1 Science


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Single Articles


    BMC Cancer

  1. VESUNA F, Bergman Y, Raman V
    Genomic pathways modulated by Twist in breast cancer.
    BMC Cancer. 2017;17:52.
    PubMed     Text format     Abstract available

  2. PISANO M, Palomba A, Tanca A, Pagnozzi D, et al
    Protein expression changes induced in a malignant melanoma cell line by the curcumin analogue compound D6.
    BMC Cancer. 2016;16:317.
    PubMed     Text format     Abstract available


    BMC Genet

  3. YOSHIHARA M, Sato T, Saito D, Ohara O, et al
    A deletion in the intergenic region upstream of Ednrb causes head spot in the rat strain KFRS4/Kyo.
    BMC Genet. 2017;18:29.
    PubMed     Text format     Abstract available

  4. COCOS R, Schipor S, Hervella M, Cianga P, et al
    Genetic affinities among the historical provinces of Romania and Central Europe as revealed by an mtDNA analysis.
    BMC Genet. 2017;18:20.
    PubMed     Text format     Abstract available


    Cell

  5. CHOMET P, Martienssen R
    Barbara McClintock's Final Years as Nobelist and Mentor: A Memoir.
    Cell. 2017;170:1049-1054.
    PubMed     Text format     Abstract available


    Nat Rev Genet

  6. MEADOWS JRS, Lindblad-Toh K
    Dissecting evolution and disease using comparative vertebrate genomics.
    Nat Rev Genet. 2017;18:624-636.
    PubMed     Text format     Abstract available

  7. MARSIT S, Leducq JB, Durand E, Marchant A, et al
    Evolutionary biology through the lens of budding yeast comparative genomics.
    Nat Rev Genet. 2017;18:581-598.
    PubMed     Text format     Abstract available


    PLoS Biol

  8. DECK J, Gaither MR, Ewing R, Bird CE, et al
    The Genomic Observatories Metadatabase (GeOMe): A new repository for field and sampling event metadata associated with genetic samples.
    PLoS Biol. 2017;15:e2002925.
    PubMed     Text format     Abstract available

  9. MAHARJAN RP, Ferenci T
    A shifting mutational landscape in 6 nutritional states: Stress-induced mutagenesis as a series of distinct stress input-mutation output relationships.
    PLoS Biol. 2017;15:e2001477.
    PubMed     Text format     Abstract available


    PLoS Comput Biol

  10. KIM M, Eetemadi A, Tagkopoulos I
    DeepPep: Deep proteome inference from peptide profiles.
    PLoS Comput Biol. 2017;13:e1005661.
    PubMed     Text format     Abstract available

  11. MURRAY KD, Webers C, Ong CS, Borevitz J, et al
    kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity.
    PLoS Comput Biol. 2017;13:e1005727.
    PubMed     Text format     Abstract available


    PLoS One

  12. ZEREYESUS YA, Dalton TJ
    Rates of return to sorghum and millet research investments: A meta-analysis.
    PLoS One. 2017;12:e0180414.
    PubMed     Text format     Abstract available

  13. CUI H, Bansal V, Grunert M, Malecova B, et al
    Muscle-relevant genes marked by stable H3K4me2/3 profiles and enriched MyoD binding during myogenic differentiation.
    PLoS One. 2017;12:e0179464.
    PubMed     Text format     Abstract available

  14. FENG B, Guo Q, Zheng K, Qin Y, et al
    Antennal transcriptome analysis of the piercing moth Oraesia emarginata (Lepidoptera: Noctuidae).
    PLoS One. 2017;12:e0179433.
    PubMed     Text format     Abstract available

  15. BOVO S, Mazzoni G, Ribani A, Utzeri VJ, et al
    A viral metagenomic approach on a non-metagenomic experiment: Mining next generation sequencing datasets from pig DNA identified several porcine parvoviruses for a retrospective evaluation of viral infections.
    PLoS One. 2017;12:e0179462.
    PubMed     Text format     Abstract available

  16. ZHOU X, Xing X, Hou J, Liu J, et al
    Quantitative proteomics analysis of proteins involved in alkane uptake comparing the profiling of Pseudomonas aeruginosa SJTD-1 in response to n-octadecane and n-hexadecane.
    PLoS One. 2017;12:e0179842.
    PubMed     Text format     Abstract available

  17. ZEHENDER G, Veo C, Ebranati E, Carta V, et al
    Reconstructing the recent West Nile virus lineage 2 epidemic in Europe and Italy using discrete and continuous phylogeography.
    PLoS One. 2017;12:e0179679.
    PubMed     Text format     Abstract available

  18. EZURA K, Ji-Seong K, Mori K, Suzuki Y, et al
    Genome-wide identification of pistil-specific genes expressed during fruit set initiation in tomato (Solanum lycopersicum).
    PLoS One. 2017;12:e0180003.
    PubMed     Text format     Abstract available

  19. HAN B, Zhang S, Zeng F, Mao J, et al
    Nutritional and reproductive signaling revealed by comparative gene expression analysis in Chrysopa pallens (Rambur) at different nutritional statuses.
    PLoS One. 2017;12:e0180373.
    PubMed     Text format     Abstract available

  20. WEN F, Wu X, Li T, Jia M, et al
    Genome-wide survey of heat shock factors and heat shock protein 70s and their regulatory network under abiotic stresses in Brachypodium distachyon.
    PLoS One. 2017;12:e0180352.
    PubMed     Text format     Abstract available

  21. BAI Y, Li X
    Late Miocene Pseudolarix amabilis bract-scale complex from Zhejiang, East China.
    PLoS One. 2017;12:e0180979.
    PubMed     Text format     Abstract available

  22. D'IPPOLITO S, Di Simone N, Orteschi D, Pomponi MG, et al
    The chromosome analysis of the miscarriage tissue. Miscarried embryo/fetal crown rump length (CRL) measurement: A practical use.
    PLoS One. 2017;12:e0178113.
    PubMed     Text format     Abstract available

  23. CHEN X, Zhang M, Tan J, Huang S, et al
    Comparative transcriptome analysis provides insights into molecular mechanisms for parthenocarpic fruit development in eggplant (Solanum melongena L.).
    PLoS One. 2017;12:e0179491.
    PubMed     Text format     Abstract available

  24. GOMEZ-GARZON C, Hernandez-Santana A, Dussan J
    A genome-scale metabolic reconstruction of Lysinibacillus sphaericus unveils unexploited biotechnological potentials.
    PLoS One. 2017;12:e0179666.
    PubMed     Text format     Abstract available

  25. KIM JH, Kang JH, Jang JE, Choi SK, et al
    Population genetic structure of eelgrass (Zostera marina) on the Korean coast: Current status and conservation implications for future management.
    PLoS One. 2017;12:e0174105.
    PubMed     Text format     Abstract available

  26. LIANG D, Leung RKK, Lee SS, Kam KM, et al
    Insights into intercontinental spread of Zika virus.
    PLoS One. 2017;12:e0176710.
    PubMed     Text format     Abstract available

  27. PLANCHON M, Leger T, Spalla O, Huber G, et al
    Metabolomic and proteomic investigations of impacts of titanium dioxide nanoparticles on Escherichia coli.
    PLoS One. 2017;12:e0178437.
    PubMed     Text format     Abstract available

  28. MORENO PS, Wagner J, Mansfield CS, Stevens M, et al
    Characterisation of the canine faecal virome in healthy dogs and dogs with acute diarrhoea using shotgun metagenomics.
    PLoS One. 2017;12:e0178433.
    PubMed     Text format     Abstract available

  29. TOMAR S, Sethi R, Sundar G, Quah TC, et al
    Mutation spectrum of RB1 mutations in retinoblastoma cases from Singapore with implications for genetic management and counselling.
    PLoS One. 2017;12:e0178776.
    PubMed     Text format     Abstract available

  30. SUN Y, Chen C, Gao J, Abbas MN, et al
    Comparative mitochondrial genome analysis of Daphnis nerii and other lepidopteran insects reveals conserved mitochondrial genome organization and phylogenetic relationships.
    PLoS One. 2017;12:e0178773.
    PubMed     Text format     Abstract available

  31. AGUILAR D, Pinart M, Koppelman GH, Saeys Y, et al
    Computational analysis of multimorbidity between asthma, eczema and rhinitis.
    PLoS One. 2017;12:e0179125.
    PubMed     Text format     Abstract available

  32. DE AZEVEDO PEIXOTO L, Moellers TC, Zhang J, Lorenz AJ, et al
    Leveraging genomic prediction to scan germplasm collection for crop improvement.
    PLoS One. 2017;12:e0179191.
    PubMed     Text format     Abstract available

  33. NEY G, Schul J
    Population structure within the one-dimensional range of a coastal plain katydid.
    PLoS One. 2017;12:e0179361.
    PubMed     Text format     Abstract available

  34. HU J, Lei L, de Meaux J
    Temporal fitness fluctuations in experimental Arabidopsis thaliana populations.
    PLoS One. 2017;12:e0178990.
    PubMed     Text format     Abstract available

  35. XU EG, Mager EM, Grosell M, Stieglitz JD, et al
    Developmental transcriptomic analyses for mechanistic insights into critical pathways involved in embryogenesis of pelagic mahi-mahi (Coryphaena hippurus).
    PLoS One. 2017;12:e0180454.
    PubMed     Text format     Abstract available

  36. FAN W, Zhong Y, Qin M, Lin B, et al
    Differentially expressed microRNAs in diapausing versus HCl-treated Bombyx embryos.
    PLoS One. 2017;12:e0180085.
    PubMed     Text format     Abstract available

  37. WANG H, Ba H, Yang C, Zhang J, et al
    Inner and inter population structure construction of Chinese Jiangsu Han population based on Y23 STR system.
    PLoS One. 2017;12:e0180921.
    PubMed     Text format     Abstract available

  38. BRUNELLI A, Kampuansai J, Seielstad M, Lomthaisong K, et al
    Y chromosomal evidence on the origin of northern Thai people.
    PLoS One. 2017;12:e0181935.
    PubMed     Text format     Abstract available

  39. CHO HR, Kim HS, Park JS, Park SC, et al
    Construction and characterization of the Korean whole saliva proteome to determine ethnic differences in human saliva proteome.
    PLoS One. 2017;12:e0181765.
    PubMed     Text format     Abstract available

  40. SORIA-BOIX C, Donat-Torres MP, Urios V
    Contacts in the last 90,000 years over the Strait of Gibraltar evidenced by genetic analysis of wild boar (Sus scrofa).
    PLoS One. 2017;12:e0181929.
    PubMed     Text format     Abstract available

  41. YAKOVLEVA A, Plieskatt JL, Jensen S, Humeida R, et al
    Fit for genomic and proteomic purposes: Sampling the fitness of nucleic acid and protein derivatives from formalin fixed paraffin embedded tissue.
    PLoS One. 2017;12:e0181756.
    PubMed     Text format     Abstract available

  42. BECK SV, Carvalho GR, Barlow A, Ruber L, et al
    Plio-Pleistocene phylogeography of the Southeast Asian Blue Panchax killifish, Aplocheilus panchax.
    PLoS One. 2017;12:e0179557.
    PubMed     Text format     Abstract available

  43. DENG M, Dong Y, Zhao Z, Li Y, et al
    Dissecting the proteome dynamics of the salt stress induced changes in the leaf of diploid and autotetraploid Paulownia fortunei.
    PLoS One. 2017;12:e0181937.
    PubMed     Text format     Abstract available

  44. TANI H, Takeshita JI, Aoki H, Nakamura K, et al
    Identification of RNA biomarkers for chemical safety screening in mouse embryonic stem cells using RNA deep sequencing analysis.
    PLoS One. 2017;12:e0182032.
    PubMed     Text format     Abstract available

  45. NG PK, Lin SM, Lim PE, Hurtado AQ, et al
    Genetic and morphological analyses of Gracilaria firma and G. changii (Gracilariaceae, Rhodophyta), the commercially important agarophytes in western Pacific.
    PLoS One. 2017;12:e0182176.
    PubMed     Text format     Abstract available

  46. TONG ML, Zhao Q, Liu LL, Zhu XZ, et al
    Whole genome sequence of the Treponema pallidum subsp. pallidum strain Amoy: An Asian isolate highly similar to SS14.
    PLoS One. 2017;12:e0182768.
    PubMed     Text format     Abstract available

  47. ROZENBLUM E, Sotelo-Silveira JR, Kim GY, Zhu JY, et al
    Novel near-diploid ovarian cancer cell line derived from a highly aneuploid metastatic ovarian tumor.
    PLoS One. 2017;12:e0182610.
    PubMed     Text format     Abstract available

  48. PERSYN E, Karakachoff M, Le Scouarnec S, Le Clezio C, et al
    DoEstRare: A statistical test to identify local enrichments in rare genomic variants associated with disease.
    PLoS One. 2017;12:e0179364.
    PubMed     Text format     Abstract available

  49. ZHANG H, Yin L, Wang H, Wang G, et al
    Genome-wide identification of Hami melon miRNAs with putative roles during fruit development.
    PLoS One. 2017;12:e0180600.
    PubMed     Text format     Abstract available

  50. JAISWAL RK, Kumar P, Sharma A, Mishra DK, et al
    Proteomic identification of proteins differentially expressed following overexpression of hTERT (human telomerase reverse transcriptase) in cancer cells.
    PLoS One. 2017;12:e0181027.
    PubMed     Text format     Abstract available

  51. PINNA C, Carta L, Deiana V, Camarda I, et al
    Phyto-toponyms of Arbutus unedo L. and their distribution in Sardinia (Italy).
    PLoS One. 2017;12:e0181174.
    PubMed     Text format     Abstract available

  52. DOU L, Jia X, Wei H, Fan S, et al
    Global analysis of DNA methylation in young (J1) and senescent (J2) Gossypium hirsutum L. cotyledons by MeDIP-Seq.
    PLoS One. 2017;12:e0179141.
    PubMed     Text format     Abstract available

  53. KLYCZEK KK, Bonilla JA, Jacobs-Sera D, Adair TL, et al
    Tales of diversity: Genomic and morphological characteristics of forty-six Arthrobacter phages.
    PLoS One. 2017;12:e0180517.
    PubMed     Text format     Abstract available

  54. ALLEVATO M, Bolotin E, Grossman M, Mane-Padros D, et al
    Sequence-specific DNA binding by MYC/MAX to low-affinity non-E-box motifs.
    PLoS One. 2017;12:e0180147.
    PubMed     Text format     Abstract available

  55. RYU YS, Chandran SP, Kim K, Lee SK, et al
    Oligo- and dsDNA-mediated genome editing using a tetA dual selection system in Escherichia coli.
    PLoS One. 2017;12:e0181501.
    PubMed     Text format     Abstract available

  56. ALANAGREH L, Pegg C, Harikumar A, Buchheim M, et al
    Assessing intragenomic variation of the internal transcribed spacer two: Adapting the Illumina metagenomics protocol.
    PLoS One. 2017;12:e0181491.
    PubMed     Text format     Abstract available

  57. GUO P, Zhu B, Xu L, Niu H, et al
    Genomic prediction with parallel computing for slaughter traits in Chinese Simmental beef cattle using high-density genotypes.
    PLoS One. 2017;12:e0179885.
    PubMed     Text format     Abstract available

  58. ABERNATHY J, Brezas A, Snekvik KR, Hardy RW, et al
    Integrative functional analyses using rainbow trout selected for tolerance to plant diets reveal nutrigenomic signatures for soy utilization without the concurrence of enteritis.
    PLoS One. 2017;12:e0180972.
    PubMed     Text format     Abstract available

  59. PASCUAL T, Apellaniz-Ruiz M, Pernaut C, Cueto-Felgueroso C, et al
    Polymorphisms associated with everolimus pharmacokinetics, toxicity and survival in metastatic breast cancer.
    PLoS One. 2017;12:e0180192.
    PubMed     Text format     Abstract available


    Science

  60. LEUENBERGER P, Ganscha S, Kahraman A, Cappelletti V, et al
    Cell-wide analysis of protein thermal unfolding reveals determinants of thermostability.
    Science. 2017;355.
    PubMed     Text format     Abstract available


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