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Articles published in PLoS Comput Biol

Retrieve available abstracts of 38 articles:
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Single Articles


    May 2018
  1. HANEY S, Konen J, Marcus AI, Bazhenov M, et al
    The complex ecosystem in non small cell lung cancer invasion.
    PLoS Comput Biol. 2018;14:e1006131.
    PubMed     Text format     Abstract available


  2. SANCHEZ-RODRIGUEZ LM, Iturria-Medina Y, Baines EA, Mallo SC, et al
    Design of optimal nonlinear network controllers for Alzheimer's disease.
    PLoS Comput Biol. 2018;14:e1006136.
    PubMed     Text format     Abstract available


  3. VAN MOURIK T, Snoek L, Knapen T, Norris DG, et al
    Porcupine: A visual pipeline tool for neuroimaging analysis.
    PLoS Comput Biol. 2018;14:e1006064.
    PubMed     Text format     Abstract available


  4. THOMPSON WH, Richter CG, Plaven-Sigray P, Fransson P, et al
    Simulations to benchmark time-varying connectivity methods for fMRI.
    PLoS Comput Biol. 2018;14:e1006196.
    PubMed     Text format     Abstract available


  5. BERENS P, Freeman J, Deneux T, Chenkov N, et al
    Community-based benchmarking improves spike rate inference from two-photon calcium imaging data.
    PLoS Comput Biol. 2018;14:e1006157.
    PubMed     Text format     Abstract available


    April 2018
  6. CABALLERO JA, Humphries MD, Gurney KN
    A probabilistic, distributed, recursive mechanism for decision-making in the brain.
    PLoS Comput Biol. 2018;14:e1006033.
    PubMed     Text format     Abstract available


  7. MYKULIAK VV, Haining AWM, von Essen M, Del Rio Hernandez A, et al
    Mechanical unfolding reveals stable 3-helix intermediates in talin and alpha-catenin.
    PLoS Comput Biol. 2018;14:e1006126.
    PubMed     Text format     Abstract available


  8. AUSBORN J, Koizumi H, Barnett WH, John TT, et al
    Organization of the core respiratory network: Insights from optogenetic and modeling studies.
    PLoS Comput Biol. 2018;14:e1006148.
    PubMed     Text format     Abstract available


  9. BONNER MF, Epstein RA
    Computational mechanisms underlying cortical responses to the affordance properties of visual scenes.
    PLoS Comput Biol. 2018;14:e1006111.
    PubMed     Text format     Abstract available


  10. SCHOTT B, Traub M, Schlagenhauf C, Takamiya M, et al
    EmbryoMiner: A new framework for interactive knowledge discovery in large-scale cell tracking data of developing embryos.
    PLoS Comput Biol. 2018;14:e1006128.
    PubMed     Text format     Abstract available


  11. GUNTUPALLI JS, Feilong M, Haxby JV
    A computational model of shared fine-scale structure in the human connectome.
    PLoS Comput Biol. 2018;14:e1006120.
    PubMed     Text format     Abstract available


    March 2018
  12. PRADA J, Sasi M, Martin C, Jablonka S, et al
    An open source tool for automatic spatiotemporal assessment of calcium transients and local 'signal-close-to-noise' activity in calcium imaging data.
    PLoS Comput Biol. 2018;14:e1006054.
    PubMed     Text format     Abstract available


  13. SCHIEFER J, Niederbuhl A, Pernice V, Lennartz C, et al
    From correlation to causation: Estimating effective connectivity from zero-lag covariances of brain signals.
    PLoS Comput Biol. 2018;14:e1006056.
    PubMed     Text format     Abstract available


  14. VIEJO G, Cortier T, Peyrache A
    Brain-state invariant thalamo-cortical coordination revealed by non-linear encoders.
    PLoS Comput Biol. 2018;14:e1006041.
    PubMed     Text format     Abstract available


  15. IRASTORZA-AZCARATE I, Acemel RD, Tena JJ, Maeso I, et al
    4Cin: A computational pipeline for 3D genome modeling and virtual Hi-C analyses from 4C data.
    PLoS Comput Biol. 2018;14:e1006030.
    PubMed     Text format     Abstract available


  16. BARTON C, Morganella S, Odegard-Fougner O, Alexander S, et al
    ChromoTrace: Computational reconstruction of 3D chromosome configurations for super-resolution microscopy.
    PLoS Comput Biol. 2018;14:e1006002.
    PubMed     Text format     Abstract available


  17. BEIRNAERT C, Meysman P, Vu TN, Hermans N, et al
    speaq 2.0: A complete workflow for high-throughput 1D NMR spectra processing and quantification.
    PLoS Comput Biol. 2018;14:e1006018.
    PubMed     Text format     Abstract available


  18. KONDO Y, Aoki K, Ishii S
    Inverse tissue mechanics of cell monolayer expansion.
    PLoS Comput Biol. 2018;14:e1006029.
    PubMed     Text format     Abstract available


    February 2018
  19. DU H, Wang Y, Haensel D, Lee B, et al
    Multiscale modeling of layer formation in epidermis.
    PLoS Comput Biol. 2018;14:e1006006.
    PubMed     Text format     Abstract available


  20. SPALDING C, Keen E, Smith DJ, Krachler AM, et al
    Mathematical modelling of the antibiotic-induced morphological transition of Pseudomonas aeruginosa.
    PLoS Comput Biol. 2018;14:e1006012.
    PubMed     Text format     Abstract available


  21. ABEYSURIYA RG, Hadida J, Sotiropoulos SN, Jbabdi S, et al
    A biophysical model of dynamic balancing of excitation and inhibition in fast oscillatory large-scale networks.
    PLoS Comput Biol. 2018;14:e1006007.
    PubMed     Text format     Abstract available


  22. ARNATKEVIC IUTE A, Fulcher BD, Pocock R, Fornito A, et al
    Hub connectivity, neuronal diversity, and gene expression in the Caenorhabditis elegans connectome.
    PLoS Comput Biol. 2018;14:e1005989.
    PubMed     Text format     Abstract available


  23. DONHAUSER PW, Florin E, Baillet S
    Imaging of neural oscillations with embedded inferential and group prevalence statistics.
    PLoS Comput Biol. 2018;14:e1005990.
    PubMed     Text format     Abstract available


  24. CHAKRABORTTY B, Blilou I, Scheres B, Mulder BM, et al
    A computational framework for cortical microtubule dynamics in realistically shaped plant cells.
    PLoS Comput Biol. 2018;14:e1005959.
    PubMed     Text format     Abstract available


    January 2018
  25. CIGANOVIC N, Warren RL, Keceli B, Jacob S, et al
    Static length changes of cochlear outer hair cells can tune low-frequency hearing.
    PLoS Comput Biol. 2018;14:e1005936.
    PubMed     Text format     Abstract available


  26. ZHANG Z, Cheng Z, Lin Z, Nie C, et al
    A neural network model for the orbitofrontal cortex and task space acquisition during reinforcement learning.
    PLoS Comput Biol. 2018;14:e1005925.
    PubMed     Text format     Abstract available


    November 2017
  27. LOPEZ-PERSEM A, Rigoux L, Bourgeois-Gironde S, Daunizeau J, et al
    Choose, rate or squeeze: Comparison of economic value functions elicited by different behavioral tasks.
    PLoS Comput Biol. 2017;13:e1005848.
    PubMed     Text format     Abstract available


  28. RAKOWSKI F, Karbowski J
    Optimal synaptic signaling connectome for locomotory behavior in Caenorhabditis elegans: Design minimizing energy cost.
    PLoS Comput Biol. 2017;13:e1005834.
    PubMed     Text format     Abstract available


    October 2017
  29. KOTELNIKOVA E, Kiani NA, Abad E, Martinez-Lapiscina EH, et al
    Dynamics and heterogeneity of brain damage in multiple sclerosis.
    PLoS Comput Biol. 2017;13:e1005757.
    PubMed     Text format     Abstract available


  30. XU M, Papageorgiou DP, Abidi SZ, Dao M, et al
    A deep convolutional neural network for classification of red blood cells in sickle cell anemia.
    PLoS Comput Biol. 2017;13:e1005746.
    PubMed     Text format     Abstract available


  31. VEDULA V, Lee J, Xu H, Kuo CJ, et al
    A method to quantify mechanobiologic forces during zebrafish cardiac development using 4-D light sheet imaging and computational modeling.
    PLoS Comput Biol. 2017;13:e1005828.
    PubMed     Text format     Abstract available


  32. RUBIN TN, Koyejo O, Gorgolewski KJ, Jones MN, et al
    Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.
    PLoS Comput Biol. 2017;13:e1005649.
    PubMed     Text format     Abstract available


    September 2017
  33. VILLOUTREIX P, Anden J, Lim B, Lu H, et al
    Synthesizing developmental trajectories.
    PLoS Comput Biol. 2017;13:e1005742.
    PubMed     Text format     Abstract available


  34. DE HAAN W, van Straaten ECW, Gouw AA, Stam CJ, et al
    Altering neuronal excitability to preserve network connectivity in a computational model of Alzheimer's disease.
    PLoS Comput Biol. 2017;13:e1005707.
    PubMed     Text format     Abstract available


  35. CHEN Y, Wang S, Hilgetag CC, Zhou C, et al
    Features of spatial and functional segregation and integration of the primate connectome revealed by trade-off between wiring cost and efficiency.
    PLoS Comput Biol. 2017;13:e1005776.
    PubMed     Text format     Abstract available


  36. KALLENBERGER SM, Unger AL, Legewie S, Lymperopoulos K, et al
    Correlated receptor transport processes buffer single-cell heterogeneity.
    PLoS Comput Biol. 2017;13:e1005779.
    PubMed     Text format     Abstract available


    August 2017
  37. BEJJANKI VR, da Silveira RA, Cohen JD, Turk-Browne NB, et al
    Noise correlations in the human brain and their impact on pattern classification.
    PLoS Comput Biol. 2017;13:e1005674.
    PubMed     Text format     Abstract available


  38. HELLYER PJ, Clopath C, Kehagia AA, Turkheimer FE, et al
    From homeostasis to behavior: Balanced activity in an exploration of embodied dynamic environmental-neural interaction.
    PLoS Comput Biol. 2017;13:e1005721.
    PubMed     Text format     Abstract available


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